RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W GUT2P32191 649 aa10.56□□□□□ -0.72
PRE6YOL038W GDA1P32621 518 aa10.56□□□□□ -0.72
PRE6YOL038W PIM1P36775 1133 aa10.56□□□□□ -0.72
PRE6YOL038W MRP21P38175 177 aa10.56□□□□□ -0.72
PRE6YOL038W YAL037WP39728 267 aa10.56□□□□□ -0.72
PRE6YOL038W SSU1P41930 458 aa10.56□□□□□ -0.72
PRE6YOL038W JSN1P47135 1091 aaKnown RBP RIP-Chip data10.56□□□□□ -0.72not detected
PRE6YOL038W RPN9Q04062 393 aaKnown RBP10.56□□□□□ -0.72
PRE6YOL038W NHX1Q04121 633 aa10.56□□□□□ -0.72
PRE6YOL038W YOL073CQ08232 322 aa10.56□□□□□ -0.72
PRE6YOL038W HOS1Q12214 470 aa10.56□□□□□ -0.72
PRE6YOL038W YDR061WQ12298 539 aa10.56□□□□□ -0.72
PRE6YOL038W INO1P11986 533 aa10.55□□□□□ -0.72
PRE6YOL038W PRP9P19736 530 aaKnown RBP10.55□□□□□ -0.72
PRE6YOL038W SPT16P32558 1035 aaKnown RBP10.55□□□□□ -0.72
PRE6YOL038W PRP18P33411 251 aaPredicted RBP10.55□□□□□ -0.72
PRE6YOL038W POP4P38336 279 aa10.55□□□□□ -0.72
PRE6YOL038W ACO2P39533 789 aa10.55□□□□□ -0.72
PRE6YOL038W LSM5P40089 93 aaKnown RBP10.55□□□□□ -0.72
PRE6YOL038W IME4P41833 600 aa10.55□□□□□ -0.72
PRE6YOL038W NOP15P53927 220 aaPredicted RBP10.55□□□□□ -0.72
PRE6YOL038W OSH6Q02201 448 aa10.55□□□□□ -0.72
PRE6YOL038W HRK1Q08732 759 aaKnown RBP10.55□□□□□ -0.72
PRE6YOL038W UPC2Q12151 913 aa10.55□□□□□ -0.72
PRE6YOL038W YCR099CP25657 155 aa10.54□□□□□ -0.72
PRE6YOL038W CNS1P33313 385 aa10.54□□□□□ -0.72
PRE6YOL038W MRPL37P36532 105 aa10.54□□□□□ -0.72
PRE6YOL038W YFR018CP43599 363 aa10.54□□□□□ -0.72
PRE6YOL038W UTP6Q02354 440 aaKnown RBP10.54□□□□□ -0.72
PRE6YOL038W TRA1P38811 3744 aa10.54□□□□□ -0.72
PRE6YOL038W PHO5P00635 467 aa10.53□□□□□ -0.72
PRE6YOL038W GCR1P07261 785 aa10.53□□□□□ -0.72
PRE6YOL038W ARA1P38115 344 aa10.53□□□□□ -0.72
PRE6YOL038W PXA1P41909 870 aa10.53□□□□□ -0.72
PRE6YOL038W PET117Q02771 107 aa10.53□□□□□ -0.72
PRE6YOL038W TFB2Q02939 513 aa10.53□□□□□ -0.72
PRE6YOL038W CTK1Q03957 528 aaKnown RBP10.53□□□□□ -0.72
PRE6YOL038W NUT2Q06213 157 aa10.53□□□□□ -0.72
PRE6YOL038W MEC1P38111 2368 aa10.53□□□□□ -0.72
PRE6YOL038W NSP1P14907 823 aaKnown RBP10.52□□□□□ -0.73
PRE6YOL038W RSC6P25632 483 aa10.52□□□□□ -0.73
PRE6YOL038W GCG1P32656 232 aaKnown RBP10.52□□□□□ -0.73
PRE6YOL038W STS1P38637 319 aa10.52□□□□□ -0.73
PRE6YOL038W UBA4P38820 440 aa10.52□□□□□ -0.73
PRE6YOL038W CPR6P53691 371 aaKnown RBP10.52□□□□□ -0.73
PRE6YOL038W NPL3Q01560 414 aaKnown RBP RIP-Chip data10.52□□□□□ -0.73 RIP-Chip
PRE6YOL038W AAT1Q01802 451 aa10.52□□□□□ -0.73
PRE6YOL038W EGD1Q02642 157 aaKnown RBP10.52□□□□□ -0.73
PRE6YOL038W BMT6Q12291 365 aa10.52□□□□□ -0.73
PRE6YOL038W SUL2Q12325 893 aa10.52□□□□□ -0.73
PRE6YOL038W CYR1P08678 2026 aaKnown RBP10.51□□□□□ -0.73
PRE6YOL038W GAT1P43574 510 aa10.51□□□□□ -0.73
PRE6YOL038W CCT8P47079 568 aaKnown RBP10.51□□□□□ -0.73
PRE6YOL038W PEX8P53248 589 aa10.51□□□□□ -0.73
PRE6YOL038W ADY3Q07732 790 aa10.51□□□□□ -0.73
PRE6YOL038W CUE5Q08412 411 aaKnown RBP10.51□□□□□ -0.73
PRE6YOL038W HRP1Q99383 534 aaKnown RBP10.51□□□□□ -0.73
PRE6YOL038W RAD1P06777 1100 aa10.5□□□□□ -0.73
PRE6YOL038W YHI9P38765 294 aa10.5□□□□□ -0.73
PRE6YOL038W LRO1P40345 661 aa10.5□□□□□ -0.73
PRE6YOL038W YNL320WP42840 284 aa10.5□□□□□ -0.73
PRE6YOL038W RTA1P53047 317 aa10.5□□□□□ -0.73
PRE6YOL038W BLS1Q06071 122 aa10.5□□□□□ -0.73
PRE6YOL038W CMD1P06787 147 aaKnown RBP10.49□□□□□ -0.73
PRE6YOL038W YCR006CP25350 157 aa10.49□□□□□ -0.73
PRE6YOL038W URA7P28274 579 aaKnown RBP10.49□□□□□ -0.73
PRE6YOL038W URA10P30402 227 aa10.49□□□□□ -0.73
PRE6YOL038W CDC13P32797 924 aaKnown RBP10.49□□□□□ -0.73
PRE6YOL038W STB6P36085 766 aa10.49□□□□□ -0.73
PRE6YOL038W YSW1P38280 609 aa10.49□□□□□ -0.73
PRE6YOL038W YJL107CP42947 387 aa10.49□□□□□ -0.73
PRE6YOL038W ZRG17P53735 605 aa10.49□□□□□ -0.73
PRE6YOL038W BNI4P53858 892 aa10.49□□□□□ -0.73
PRE6YOL038W TRM12Q04235 462 aa10.49□□□□□ -0.73
PRE6YOL038W VTI1Q04338 217 aa10.49□□□□□ -0.73
PRE6YOL038W BSC6Q08280 497 aa10.49□□□□□ -0.73
PRE6YOL038W MRH1Q12117 320 aaPredicted RBP10.49□□□□□ -0.73
PRE6YOL038W YDR262WQ12331 272 aa10.49□□□□□ -0.73
PRE6YOL038W GPR1Q12361 961 aa10.49□□□□□ -0.73
PRE6YOL038W LYS1P38998 373 aaRIP-Chip data10.48□□□□□ -0.73not detected
PRE6YOL038W SPG5P42933 373 aa10.48□□□□□ -0.73
PRE6YOL038W YFR020WP43600 232 aa10.48□□□□□ -0.73
PRE6YOL038W CCE1Q03702 353 aa10.48□□□□□ -0.73
PRE6YOL038W VTA1Q06263 330 aa10.48□□□□□ -0.73
PRE6YOL038W MSB1P21339 1137 aaKnown RBP10.47□□□□□ -0.73
PRE6YOL038W ATP12P22135 325 aa10.47□□□□□ -0.73
PRE6YOL038W SKN1P33336 771 aa10.47□□□□□ -0.73
PRE6YOL038W THI80P35202 319 aa10.47□□□□□ -0.73
PRE6YOL038W YHR182WP38870 785 aa10.47□□□□□ -0.73
PRE6YOL038W SSN3P39073 555 aa10.47□□□□□ -0.73
PRE6YOL038W NDC80P40460 691 aa10.47□□□□□ -0.73
PRE6YOL038W ALK1P43633 760 aaKnown RBP10.47□□□□□ -0.73
PRE6YOL038W SGF73P53165 657 aa10.47□□□□□ -0.73
PRE6YOL038W ARE2P53629 642 aaKnown RBP10.47□□□□□ -0.73
PRE6YOL038W RHO3Q00245 231 aaKnown RBP10.47□□□□□ -0.73
PRE6YOL038W RSC3Q06639 885 aa10.47□□□□□ -0.73
PRE6YOL038W NUS1Q12063 375 aa10.47□□□□□ -0.73
PRE6YOL038W GTT2Q12390 233 aa10.47□□□□□ -0.73
PRE6YOL038W STE2D6VTK4 431 aa10.46□□□□□ -0.73
PRE6YOL038W SWI5P08153 709 aa10.46□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 81.8 ms