RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W MEX67Q99257 599 aaKnown RBP6.19□□□□□ -1.42
CAF40YNL288W CCH1P50077 2039 aa6.19□□□□□ -1.42
CAF40YNL288W COX5AP00424 153 aa6.18□□□□□ -1.42
CAF40YNL288W HSF1P10961 833 aa6.18□□□□□ -1.42
CAF40YNL288W SST2P11972 698 aaKnown RBP6.18□□□□□ -1.42
CAF40YNL288W PEP5P12868 1029 aa6.18□□□□□ -1.42
CAF40YNL288W NFS1P25374 497 aa6.18□□□□□ -1.42
CAF40YNL288W MGT1P26188 188 aa6.18□□□□□ -1.42
CAF40YNL288W PMI40P29952 429 aaKnown RBP6.18□□□□□ -1.42
CAF40YNL288W PUB1P32588 453 aaKnown RBP RIP-Chip data6.18□□□□□ -1.42 RIP-Chip
CAF40YNL288W NFU1P32860 256 aa6.18□□□□□ -1.42
CAF40YNL288W PEX5P35056 612 aa6.18□□□□□ -1.42
CAF40YNL288W NNK1P36003 928 aa6.18□□□□□ -1.42
CAF40YNL288W FMO1P38866 432 aa6.18□□□□□ -1.42
CAF40YNL288W FAA3P39002 694 aa6.18□□□□□ -1.42
CAF40YNL288W INA22P40576 216 aa6.18□□□□□ -1.42
CAF40YNL288W YNL320WP42840 284 aa6.18□□□□□ -1.42
CAF40YNL288W AMA1P50082 593 aa6.18□□□□□ -1.42
CAF40YNL288W VEL1P53058 206 aa6.18□□□□□ -1.42
CAF40YNL288W STR3P53101 465 aaKnown RBP6.18□□□□□ -1.42
CAF40YNL288W AIM14P53109 570 aa6.18□□□□□ -1.42
CAF40YNL288W NMA2P53204 395 aa6.18□□□□□ -1.42
CAF40YNL288W PRM1P53835 661 aa6.18□□□□□ -1.42
CAF40YNL288W IPI3P53877 555 aa6.18□□□□□ -1.42
CAF40YNL288W SIW14P53965 281 aa6.18□□□□□ -1.42
CAF40YNL288W ORC3P54790 616 aa6.18□□□□□ -1.42
CAF40YNL288W YPL109CQ02981 657 aa6.18□□□□□ -1.42
CAF40YNL288W PIR1Q03178 341 aa6.18□□□□□ -1.42
CAF40YNL288W RLI1Q03195 608 aaKnown RBP6.18□□□□□ -1.42
CAF40YNL288W CMS1Q07897 291 aaKnown RBP6.18□□□□□ -1.42
CAF40YNL288W SFI1Q12369 946 aa6.18□□□□□ -1.42
CAF40YNL288W MSF1P08425 469 aa6.17□□□□□ -1.42
CAF40YNL288W ERR1P0CX10 437 aa6.17□□□□□ -1.42
CAF40YNL288W ERR2P0CX11 437 aa6.17□□□□□ -1.42
CAF40YNL288W SCH9P11792 824 aaKnown RBP6.17□□□□□ -1.42
CAF40YNL288W HOM2P13663 365 aaKnown RBP6.17□□□□□ -1.42
CAF40YNL288W TSR4P25040 408 aa6.17□□□□□ -1.42
CAF40YNL288W NDI1P32340 513 aa6.17□□□□□ -1.42
CAF40YNL288W ECM32P32644 1121 aaKnown RBP6.17□□□□□ -1.42
CAF40YNL288W KES1P35844 434 aaKnown RBP6.17□□□□□ -1.42
CAF40YNL288W SPP381P38282 291 aaPredicted RBP6.17□□□□□ -1.42
CAF40YNL288W MSR1P38714 643 aa6.17□□□□□ -1.42
CAF40YNL288W YAR028WP39548 234 aa6.17□□□□□ -1.42
CAF40YNL288W GDH3P39708 457 aa6.17□□□□□ -1.42
CAF40YNL288W DPH1P40487 425 aaKnown RBP6.17□□□□□ -1.42
CAF40YNL288W ERR3P42222 437 aa6.17□□□□□ -1.42
CAF40YNL288W BUD13P46947 266 aaPredicted RBP6.17□□□□□ -1.42
CAF40YNL288W CPR6P53691 371 aaKnown RBP6.17□□□□□ -1.42
CAF40YNL288W TEP1P53916 434 aa6.17□□□□□ -1.42
CAF40YNL288W CDC14Q00684 551 aa6.17□□□□□ -1.42
CAF40YNL288W CLU1Q03690 1277 aaKnown RBP6.17□□□□□ -1.42
CAF40YNL288W ARP9Q05123 467 aa6.17□□□□□ -1.42
CAF40YNL288W BRE4Q07660 1125 aa6.17□□□□□ -1.42
CAF40YNL288W RSB1Q08417 382 aa6.17□□□□□ -1.42
CAF40YNL288W TRE2Q08693 809 aa6.17□□□□□ -1.42
CAF40YNL288W ACM1Q08981 209 aa6.17□□□□□ -1.42
CAF40YNL288W MNE1P24720 663 aa6.16□□□□□ -1.42
CAF40YNL288W HCM1P25364 564 aa6.16□□□□□ -1.42
CAF40YNL288W LAS1P36146 502 aaPredicted RBP6.16□□□□□ -1.42
CAF40YNL288W SMF2P38778 549 aa6.16□□□□□ -1.42
CAF40YNL288W SIP4P46954 829 aa6.16□□□□□ -1.42
CAF40YNL288W YJR039WP47107 1121 aa6.16□□□□□ -1.42
CAF40YNL288W TAH11P47112 604 aa6.16□□□□□ -1.42
CAF40YNL288W PRP31P49704 494 aaPredicted RBP6.16□□□□□ -1.42
CAF40YNL288W TIM13P53299 105 aa6.16□□□□□ -1.42
CAF40YNL288W GND2P53319 492 aa6.16□□□□□ -1.42
CAF40YNL288W TDA7P53882 636 aaPredicted RBP6.16□□□□□ -1.42
CAF40YNL288W COG6P53959 839 aa6.16□□□□□ -1.42
CAF40YNL288W YMR160WQ03823 816 aa6.16□□□□□ -1.42
CAF40YNL288W YPR114WQ06107 315 aa6.16□□□□□ -1.42
CAF40YNL288W PER33Q12144 273 aa6.16□□□□□ -1.42
CAF40YNL288W ADH4P10127 382 aa6.15□□□□□ -1.42
CAF40YNL288W EMC1P25574 760 aa6.15□□□□□ -1.42
CAF40YNL288W KAR4P25583 335 aa6.15□□□□□ -1.42
CAF40YNL288W URA7P28274 579 aaKnown RBP6.15□□□□□ -1.42
CAF40YNL288W URA10P30402 227 aa6.15□□□□□ -1.42
CAF40YNL288W TPS2P31688 896 aaKnown RBP6.15□□□□□ -1.42
CAF40YNL288W SMI1P32566 505 aa6.15□□□□□ -1.42
CAF40YNL288W SRP101P32916 621 aa6.15□□□□□ -1.42
CAF40YNL288W RAD26P40352 1085 aa6.15□□□□□ -1.42
CAF40YNL288W MRPS18P42847 217 aa6.15□□□□□ -1.42
CAF40YNL288W SAE2P46946 345 aa6.15□□□□□ -1.42
CAF40YNL288W ATG36P46983 293 aa6.15□□□□□ -1.42
CAF40YNL288W SPC105P53148 917 aa6.15□□□□□ -1.42
CAF40YNL288W EFM6P53970 246 aa6.15□□□□□ -1.42
CAF40YNL288W SHR3Q02774 210 aa6.15□□□□□ -1.42
CAF40YNL288W SLU7Q02775 382 aaKnown RBP6.15□□□□□ -1.42
CAF40YNL288W YMR027WQ04371 470 aa6.15□□□□□ -1.42
CAF40YNL288W CMD1P06787 147 aaKnown RBP6.14□□□□□ -1.43
CAF40YNL288W SEC63P14906 663 aa6.14□□□□□ -1.43
CAF40YNL288W HEM15P16622 393 aa6.14□□□□□ -1.43
CAF40YNL288W CBF1P17106 351 aa6.14□□□□□ -1.43
CAF40YNL288W ACO1P19414 778 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
CAF40YNL288W PMA2P19657 947 aa6.14□□□□□ -1.43
CAF40YNL288W HSP60P19882 572 aaKnown RBP6.14□□□□□ -1.43
CAF40YNL288W CLN1P20437 546 aa6.14□□□□□ -1.43
CAF40YNL288W YSP3P25036 478 aa6.14□□□□□ -1.43
CAF40YNL288W DCC1P25559 380 aa6.14□□□□□ -1.43
CAF40YNL288W GID7P25569 745 aa6.14□□□□□ -1.43
CAF40YNL288W MSH2P25847 964 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms