RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	MGM1	P32266	881 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	ORC2	P32833	620 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	HES1	P35843	434 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	GEX2	P36173	615 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	BNA1	P47096	177 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	CTF18	P49956	741 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	ARP5	P53946	755 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	GTR1	Q00582	310 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	AAT1	Q01802	451 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	STP3	Q05937	343 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	THI7	Q05998	598 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	BSP1	Q06604	576 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	RAD34	Q06665	692 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	ATG23	Q06671	453 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	CSR1	Q06705	408 aa	Known RBP	3.87	□□□□□ -1.79
TPM1	YNL079C	RIX7	Q07844	837 aa	Known RBP	3.87	□□□□□ -1.79
TPM1	YNL079C	PSK2	Q08217	1101 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	TAH18	Q12181	623 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	COX17	Q12287	69 aa		3.87	□□□□□ -1.79
TPM1	YNL079C	PGA3	Q12746	312 aa	Known RBP	3.87	□□□□□ -1.79
TPM1	YNL079C	ATP2	P00830	511 aa	Known RBP	3.86	□□□□□ -1.79
TPM1	YNL079C	YML003W	P0CF16	290 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	MATALPHA2	P0CY08	210 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	HMLALPHA2	P0CY09	210 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	APN1	P22936	367 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	DPB3	P27344	201 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	IMP2'	P32351	346 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	RPN12	P32496	274 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	PRX1	P34227	261 aa	Known RBP	3.86	□□□□□ -1.79
TPM1	YNL079C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
TPM1	YNL079C	RRT6	P53117	311 aa	Predicted RBP	3.86	□□□□□ -1.79
TPM1	YNL079C	ATP23	P53722	227 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	CSL4	P53859	292 aa	Predicted RBP	3.86	□□□□□ -1.79
TPM1	YNL079C	IRC3	Q06683	689 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	YPL150W	Q12152	901 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	PCD1	Q12524	340 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	YLR111W	Q12528	110 aa		3.86	□□□□□ -1.79
TPM1	YNL079C	FIG2	P25653	1609 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	CYB2	P00175	591 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	PGK1	P00560	416 aa	Known RBP	3.85	□□□□□ -1.79
TPM1	YNL079C	TPK1	P06244	397 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	NUP1	P20676	1076 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	LRE1	P25579	583 aa	Known RBP	3.85	□□□□□ -1.79
TPM1	YNL079C	RFA2	P26754	273 aa	Known RBP	3.85	□□□□□ -1.79
TPM1	YNL079C	LAC1	P28496	418 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	NUP120	P35729	1037 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	FTH1	P38310	465 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	IMD2	P38697	523 aa	Known RBP	3.85	□□□□□ -1.79
TPM1	YNL079C	SPL2	P38839	148 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	RSM25	P40496	264 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	IML2	P47031	731 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	IRC8	P47046	822 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	MSY1	P48527	492 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	IMD3	P50095	523 aa	Known RBP	3.85	□□□□□ -1.79
TPM1	YNL079C	RSC1	P53236	928 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	PIL1	P53252	339 aa	Known RBP	3.85	□□□□□ -1.79
TPM1	YNL079C	RPT4	P53549	437 aa	Known RBP	3.85	□□□□□ -1.79
TPM1	YNL079C	YML131W	Q03102	365 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	INM2	Q05533	292 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	TRM8	Q12009	286 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	SWT1	Q12104	458 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	FRE7	Q12333	620 aa		3.85	□□□□□ -1.79
TPM1	YNL079C	CET1	O13297	549 aa	Predicted RBP	3.84	□□□□□ -1.79
TPM1	YNL079C	SNF1	P06782	633 aa	Known RBP	3.84	□□□□□ -1.79
TPM1	YNL079C	TY2A-LR1	P0C2J4	438 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	TY2A-F	P0CX61	438 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	TY2A-GR2	P0CX62	438 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	LCB1	P25045	558 aa	Known RBP	3.84	□□□□□ -1.79
TPM1	YNL079C	TY2A-C	P25383	438 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	PTC6	P25646	442 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	KRE2	P27809	442 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	RAD16	P31244	790 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	GSH1	P32477	678 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	RKM3	P38222	552 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	PFF1	P38244	976 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	UBX6	P47049	396 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	BPL1	P48445	690 aa	Predicted RBP	3.84	□□□□□ -1.79
TPM1	YNL079C	PSP1	P50896	841 aa	Known RBP	3.84	□□□□□ -1.79
TPM1	YNL079C	COG1	P53079	417 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	IRC4	Q03036	179 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	TY2A-DR2	Q03483	438 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	SEG1	Q04279	960 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	YDR109C	Q04585	715 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	VID22	Q05934	901 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	ORM2	Q06144	216 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	ETT1	Q08421	412 aa	Known RBP	3.84	□□□□□ -1.79
TPM1	YNL079C	LYS21	Q12122	440 aa	Known RBP	3.84	□□□□□ -1.79
TPM1	YNL079C	BAG7	Q12128	409 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	TY2A-B	Q12260	438 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	TY2A-OR2	Q12293	438 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	TY2A-DR1	Q12392	438 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	TY2A-OR1	Q12439	438 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	TY2A-DR3	Q99303	438 aa		3.84	□□□□□ -1.79
TPM1	YNL079C	ILV2	P07342	687 aa	Known RBP	3.83	□□□□□ -1.8
TPM1	YNL079C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
TPM1	YNL079C	SPO16	P17122	198 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	COQ1	P18900	473 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	RDS1	P25611	832 aa		3.83	□□□□□ -1.8
TPM1	YNL079C	RPT3	P33298	428 aa	Known RBP	3.83	□□□□□ -1.8
TPM1	YNL079C	MAL33	P38157	468 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms