RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W SPE1P08432 466 aa7.22□□□□□ -1.25
HDA1YNL021W PCT1P13259 424 aa7.22□□□□□ -1.25
HDA1YNL021W DBP3P20447 523 aaKnown RBP7.22□□□□□ -1.25
HDA1YNL021W SPB1P25582 841 aaPredicted RBP7.22□□□□□ -1.25
HDA1YNL021W VID24P38263 362 aa7.22□□□□□ -1.25
HDA1YNL021W TIF4631P39935 952 aaKnown RBP7.22□□□□□ -1.25
HDA1YNL021W YGL036WP53185 909 aaPredicted RBP7.22□□□□□ -1.25
HDA1YNL021W RAD33Q04231 177 aa7.22□□□□□ -1.25
HDA1YNL021W SOV1Q04748 898 aa7.22□□□□□ -1.25
HDA1YNL021W MLH2Q07980 695 aa7.22□□□□□ -1.25
HDA1YNL021W YJR112W-AQ3E743 109 aa7.22□□□□□ -1.25
HDA1YNL021W AFI1Q99222 893 aa7.22□□□□□ -1.25
HDA1YNL021W THI2P38141 450 aa7.21□□□□□ -1.25
HDA1YNL021W MUP3P38734 546 aa7.21□□□□□ -1.25
HDA1YNL021W URM1P40554 99 aaPredicted RBP7.21□□□□□ -1.25
HDA1YNL021W SHE4P51534 789 aa7.21□□□□□ -1.25
HDA1YNL021W EAF7P53911 425 aaKnown RBP7.21□□□□□ -1.25
HDA1YNL021W SWA2Q06677 668 aa7.21□□□□□ -1.25
HDA1YNL021W YDL073WQ07454 984 aa7.21□□□□□ -1.25
HDA1YNL021W YOR019WQ99248 730 aa7.21□□□□□ -1.25
HDA1YNL021W SAC3P46674 1301 aa7.21□□□□□ -1.26
HDA1YNL021W ERG20P08524 352 aaKnown RBP7.21□□□□□ -1.26
HDA1YNL021W SWH1P35845 1188 aa7.21□□□□□ -1.26
HDA1YNL021W EFR3Q03653 782 aaKnown RBP7.21□□□□□ -1.26
HDA1YNL021W PHO92Q06390 306 aa7.21□□□□□ -1.26
HDA1YNL021W APL4Q12028 832 aa7.21□□□□□ -1.26
HDA1YNL021W SUR1P33300 382 aa7.2□□□□□ -1.26
HDA1YNL021W PGM1P33401 570 aaKnown RBP7.2□□□□□ -1.26
HDA1YNL021W MAL33P38157 468 aa7.2□□□□□ -1.26
HDA1YNL021W REG2P38232 338 aa7.2□□□□□ -1.26
HDA1YNL021W YSW1P38280 609 aa7.2□□□□□ -1.26
HDA1YNL021W GCV2P49095 1034 aa7.2□□□□□ -1.26
HDA1YNL021W YLR456WQ06199 204 aa7.2□□□□□ -1.26
HDA1YNL021W DIB1Q06819 143 aaPredicted RBP7.2□□□□□ -1.26
HDA1YNL021W POM34Q12445 299 aa7.2□□□□□ -1.26
HDA1YNL021W YMR084WA2P2R3 262 aa7.19□□□□□ -1.26
HDA1YNL021W LAT1P12695 482 aaKnown RBP7.19□□□□□ -1.26
HDA1YNL021W DAL80P26343 269 aa7.19□□□□□ -1.26
HDA1YNL021W AIM26P32858 118 aa7.19□□□□□ -1.26
HDA1YNL021W KTR3P38130 404 aaPredicted RBP7.19□□□□□ -1.26
HDA1YNL021W ATF1P40353 525 aa7.19□□□□□ -1.26
HDA1YNL021W ASE1P50275 885 aa7.19□□□□□ -1.26
HDA1YNL021W MRPS35P53292 345 aa7.19□□□□□ -1.26
HDA1YNL021W YLR415CO13578 112 aa7.19□□□□□ -1.26
HDA1YNL021W DFR1P07807 211 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
HDA1YNL021W PRE8P23639 250 aa7.19□□□□□ -1.26
HDA1YNL021W URK1P27515 501 aa7.19□□□□□ -1.26
HDA1YNL021W YEL043WP32618 956 aa7.19□□□□□ -1.26
HDA1YNL021W WHI3P34761 661 aaKnown RBP7.19□□□□□ -1.26
HDA1YNL021W SEC9P40357 651 aa7.19□□□□□ -1.26
HDA1YNL021W MND2P40577 368 aa7.19□□□□□ -1.26
HDA1YNL021W OYE3P41816 400 aaPredicted RBP7.19□□□□□ -1.26
HDA1YNL021W CCT7P42943 550 aaKnown RBP7.19□□□□□ -1.26
HDA1YNL021W DON1Q05610 365 aa7.19□□□□□ -1.26
HDA1YNL021W CHS5Q12114 671 aaKnown RBP7.19□□□□□ -1.26
HDA1YNL021W PRS5Q12265 496 aaKnown RBP7.19□□□□□ -1.26
HDA1YNL021W RPL1AP0CX43 217 aaKnown RBP7.18□□□□□ -1.26
HDA1YNL021W RPL1BP0CX44 217 aaKnown RBP7.18□□□□□ -1.26
HDA1YNL021W POL12P38121 705 aaPredicted RBP7.18□□□□□ -1.26
HDA1YNL021W RBS1Q05672 457 aaKnown RBP7.18□□□□□ -1.26
HDA1YNL021W DBP9Q06218 594 aaKnown RBP7.18□□□□□ -1.26
HDA1YNL021W MRN1Q08925 612 aaKnown RBP RIP-Chip data7.18□□□□□ -1.26not detected
HDA1YNL021W NUS1Q12063 375 aa7.18□□□□□ -1.26
HDA1YNL021W LSP1Q12230 341 aaKnown RBP7.18□□□□□ -1.26
HDA1YNL021W DCG1P32460 244 aa7.18□□□□□ -1.26
HDA1YNL021W TOS1P38288 455 aa7.18□□□□□ -1.26
HDA1YNL021W COX18P53239 316 aa7.18□□□□□ -1.26
HDA1YNL021W UBP16Q02863 499 aa7.18□□□□□ -1.26
HDA1YNL021W YPL108WQ02872 168 aaPredicted RBP7.18□□□□□ -1.26
HDA1YNL021W YSH1Q06224 779 aaPredicted RBP7.18□□□□□ -1.26
HDA1YNL021W YML003WP0CF16 290 aa7.17□□□□□ -1.26
HDA1YNL021W OM45P16547 393 aa7.17□□□□□ -1.26
HDA1YNL021W MSP1P28737 362 aa7.17□□□□□ -1.26
HDA1YNL021W SYN8P31377 255 aa7.17□□□□□ -1.26
HDA1YNL021W NIP1P32497 812 aaKnown RBP7.17□□□□□ -1.26
HDA1YNL021W DAD2P36162 133 aa7.17□□□□□ -1.26
HDA1YNL021W LRO1P40345 661 aa7.17□□□□□ -1.26
HDA1YNL021W RQC1Q05468 723 aaKnown RBP7.17□□□□□ -1.26
HDA1YNL021W ECM1P39715 212 aa7.16□□□□□ -1.26
HDA1YNL021W IME4P41833 600 aa7.16□□□□□ -1.26
HDA1YNL021W CTH1P47976 325 aa7.16□□□□□ -1.26
HDA1YNL021W TEX1P53851 422 aaKnown RBP7.16□□□□□ -1.26
HDA1YNL021W YML037CQ03703 340 aa7.16□□□□□ -1.26
HDA1YNL021W VTS1Q08831 523 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
HDA1YNL021W ATG29Q12092 213 aa7.16□□□□□ -1.26
HDA1YNL021W DUR1,2P32528 1835 aaKnown RBP7.16□□□□□ -1.26
HDA1YNL021W RNR2P09938 399 aaKnown RBP7.16□□□□□ -1.26
HDA1YNL021W KIN2P13186 1147 aaKnown RBP7.16□□□□□ -1.26
HDA1YNL021W VPS33P20795 691 aa7.16□□□□□ -1.26
HDA1YNL021W KIN82P25341 720 aa7.16□□□□□ -1.26
HDA1YNL021W BUD14P27637 709 aa7.16□□□□□ -1.26
HDA1YNL021W PMT1P33775 817 aa7.16□□□□□ -1.26
HDA1YNL021W AAP1P37898 856 aaKnown RBP7.16□□□□□ -1.26
HDA1YNL021W YBR259WP38338 688 aa7.16□□□□□ -1.26
HDA1YNL021W OSH3P38713 996 aaKnown RBP7.16□□□□□ -1.26
HDA1YNL021W YHR054CP38780 354 aa7.16□□□□□ -1.26
HDA1YNL021W CAK1P43568 368 aaPredicted RBP7.16□□□□□ -1.26
HDA1YNL021W ALT2P52892 507 aa7.16□□□□□ -1.26
HDA1YNL021W LUC7Q07508 261 aaPredicted RBP7.16□□□□□ -1.26
HDA1YNL021W GPN2Q08726 347 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms