RNA–Protein interactions for RNA: YMR276W

DSK2, Transcript of Nuclear-enriched ubiquitin-like polyubiquitin-binding protein, yeast

Gene DSK2, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSK2	YMR276W	RED1	P14291	827 aa		11.94	□□□□□ -0.5
DSK2	YMR276W	YSW1	P38280	609 aa		11.94	□□□□□ -0.5
DSK2	YMR276W	OSH6	Q02201	448 aa		11.94	□□□□□ -0.5
DSK2	YMR276W	TFB2	Q02939	513 aa		11.94	□□□□□ -0.5
DSK2	YMR276W	VPS60	Q03390	229 aa		11.94	□□□□□ -0.5
DSK2	YMR276W	RCO1	Q04779	684 aa		11.94	□□□□□ -0.5
DSK2	YMR276W	BNA5	Q05979	453 aa		11.94	□□□□□ -0.5
DSK2	YMR276W	BLS1	Q06071	122 aa		11.94	□□□□□ -0.5
DSK2	YMR276W	VTA1	Q06263	330 aa		11.94	□□□□□ -0.5
DSK2	YMR276W	RMD5	Q12508	421 aa		11.94	□□□□□ -0.5
DSK2	YMR276W	TEF1	P02994	458 aa	Known RBP	11.93	□□□□□ -0.5
DSK2	YMR276W	NSP1	P14907	823 aa	Known RBP	11.93	□□□□□ -0.5
DSK2	YMR276W	TRM1	P15565	570 aa	Known RBP	11.93	□□□□□ -0.5
DSK2	YMR276W	ATP12	P22135	325 aa		11.93	□□□□□ -0.5
DSK2	YMR276W	TOM20	P35180	183 aa		11.93	□□□□□ -0.5
DSK2	YMR276W	MEF2	P39677	819 aa		11.93	□□□□□ -0.5
DSK2	YMR276W	INA22	P40576	216 aa		11.93	□□□□□ -0.5
DSK2	YMR276W	NUP85	P46673	744 aa		11.93	□□□□□ -0.5
DSK2	YMR276W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	11.93	□□□□□ -0.5	RIP-Chip
DSK2	YMR276W	NOP14	Q99207	810 aa	Known RBP	11.93	□□□□□ -0.5
DSK2	YMR276W	SPS1	P08458	490 aa		11.92	□□□□□ -0.5
DSK2	YMR276W	PET111	P08468	800 aa		11.92	□□□□□ -0.5
DSK2	YMR276W	SCL1	P21243	252 aa	Known RBP	11.92	□□□□□ -0.5
DSK2	YMR276W	PPH21	P23594	369 aa		11.92	□□□□□ -0.5
DSK2	YMR276W	YCR099C	P25657	155 aa		11.92	□□□□□ -0.5
DSK2	YMR276W	GUT2	P32191	649 aa		11.92	□□□□□ -0.5
DSK2	YMR276W	GDA1	P32621	518 aa		11.92	□□□□□ -0.5
DSK2	YMR276W	TFC3	P34111	1160 aa		11.92	□□□□□ -0.5
DSK2	YMR276W	CIN4	P39110	191 aa		11.92	□□□□□ -0.5
DSK2	YMR276W	NAM8	Q00539	523 aa	Known RBP	11.92	□□□□□ -0.5
DSK2	YMR276W	YMR027W	Q04371	470 aa		11.92	□□□□□ -0.5
DSK2	YMR276W	YLR456W	Q06199	204 aa		11.92	□□□□□ -0.5
DSK2	YMR276W	GTT2	Q12390	233 aa		11.92	□□□□□ -0.5
DSK2	YMR276W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	11.91	□□□□□ -0.5	not detected
DSK2	YMR276W	MSH1	P25846	959 aa		11.91	□□□□□ -0.5
DSK2	YMR276W	RPC37	P36121	282 aa		11.91	□□□□□ -0.5
DSK2	YMR276W	ARP4	P80428	489 aa		11.91	□□□□□ -0.5
DSK2	YMR276W	CDC123	Q05791	360 aa		11.91	□□□□□ -0.5
DSK2	YMR276W	ATG23	Q06671	453 aa		11.91	□□□□□ -0.5
DSK2	YMR276W	BRR2	P32639	2163 aa	Known RBP	11.91	□□□□□ -0.5
DSK2	YMR276W	CDC8	P00572	216 aa		11.9	□□□□□ -0.5
DSK2	YMR276W	MF(ALPHA)2	P32435	120 aa		11.9	□□□□□ -0.5
DSK2	YMR276W	LSM5	P40089	93 aa	Known RBP	11.9	□□□□□ -0.5
DSK2	YMR276W	CEP3	P40969	608 aa		11.9	□□□□□ -0.5
DSK2	YMR276W	YJL107C	P42947	387 aa		11.9	□□□□□ -0.5
DSK2	YMR276W	ADE13	Q05911	482 aa	Known RBP	11.9	□□□□□ -0.5
DSK2	YMR276W	YOR012W	Q12351	137 aa		11.9	□□□□□ -0.5
DSK2	YMR276W	HFA1	P32874	2273 aa		11.89	□□□□□ -0.51
DSK2	YMR276W	GPA2	P10823	449 aa		11.89	□□□□□ -0.51
DSK2	YMR276W	HEM15	P16622	393 aa		11.89	□□□□□ -0.51
DSK2	YMR276W	YSR3	P23501	404 aa		11.89	□□□□□ -0.51
DSK2	YMR276W	KAR4	P25583	335 aa		11.89	□□□□□ -0.51
DSK2	YMR276W	YHI9	P38765	294 aa		11.89	□□□□□ -0.51
DSK2	YMR276W	ALA1	P40825	983 aa	Known RBP	11.89	□□□□□ -0.51
DSK2	YMR276W	ZIM17	P42844	174 aa		11.89	□□□□□ -0.51
DSK2	YMR276W	NRM1	P53718	249 aa		11.89	□□□□□ -0.51
DSK2	YMR276W	ZRG17	P53735	605 aa		11.89	□□□□□ -0.51
DSK2	YMR276W	SYT1	Q06836	1226 aa		11.89	□□□□□ -0.51
DSK2	YMR276W	NUR1	Q12066	484 aa		11.89	□□□□□ -0.51
DSK2	YMR276W	RAD1	P06777	1100 aa		11.88	□□□□□ -0.51
DSK2	YMR276W	ILS1	P09436	1072 aa	Known RBP	11.88	□□□□□ -0.51
DSK2	YMR276W	CUP1-1	P0CX80	61 aa		11.88	□□□□□ -0.51
DSK2	YMR276W	CUP1-2	P0CX81	61 aa		11.88	□□□□□ -0.51
DSK2	YMR276W	VPS34	P22543	875 aa		11.88	□□□□□ -0.51
DSK2	YMR276W	CWP1	P28319	239 aa		11.88	□□□□□ -0.51
DSK2	YMR276W	DED81	P38707	554 aa	Known RBP	11.88	□□□□□ -0.51
DSK2	YMR276W	SSN3	P39073	555 aa		11.88	□□□□□ -0.51
DSK2	YMR276W	YAL037W	P39728	267 aa		11.88	□□□□□ -0.51
DSK2	YMR276W	NNF1	P47149	201 aa		11.88	□□□□□ -0.51
DSK2	YMR276W	SFP1	P32432	683 aa		11.87	□□□□□ -0.51
DSK2	YMR276W	LAS1	P36146	502 aa	Predicted RBP	11.87	□□□□□ -0.51
DSK2	YMR276W	PIM1	P36775	1133 aa		11.87	□□□□□ -0.51
DSK2	YMR276W	YBR238C	P38330	731 aa	Known RBP	11.87	□□□□□ -0.51
DSK2	YMR276W	LEU5	P38702	357 aa		11.87	□□□□□ -0.51
DSK2	YMR276W	UME6	P39001	836 aa		11.87	□□□□□ -0.51
DSK2	YMR276W	YEL073C	P39974	107 aa		11.87	□□□□□ -0.51
DSK2	YMR276W	HXT16	P47185	567 aa		11.87	□□□□□ -0.51
DSK2	YMR276W	HST2	P53686	357 aa		11.87	□□□□□ -0.51
DSK2	YMR276W	HXT15	P54854	567 aa		11.87	□□□□□ -0.51
DSK2	YMR276W	EGD1	Q02642	157 aa	Known RBP	11.87	□□□□□ -0.51
DSK2	YMR276W	RRB1	Q04225	511 aa	Known RBP	11.87	□□□□□ -0.51
DSK2	YMR276W	NOP6	Q07623	225 aa	Known RBP	11.87	□□□□□ -0.51
DSK2	YMR276W	NUS1	Q12063	375 aa		11.87	□□□□□ -0.51
DSK2	YMR276W	NHA1	Q99271	985 aa		11.87	□□□□□ -0.51
DSK2	YMR276W	RPB2	P08518	1224 aa	Known RBP	11.86	□□□□□ -0.51
DSK2	YMR276W	ABF1	P14164	731 aa		11.86	□□□□□ -0.51
DSK2	YMR276W	RPF2	P36160	344 aa	Known RBP	11.86	□□□□□ -0.51
DSK2	YMR276W	MNN1	P39106	762 aa		11.86	□□□□□ -0.51
DSK2	YMR276W	TY4A-J	P47023	414 aa		11.86	□□□□□ -0.51
DSK2	YMR276W	PET130	P47065	347 aa		11.86	□□□□□ -0.51
DSK2	YMR276W	SPP2	Q02521	185 aa		11.86	□□□□□ -0.51
DSK2	YMR276W	RSC2	Q06488	889 aa		11.86	□□□□□ -0.51
DSK2	YMR276W	AMS1	P22855	1083 aa		11.85	□□□□□ -0.51
DSK2	YMR276W	PHO3	P24031	467 aa		11.85	□□□□□ -0.51
DSK2	YMR276W	TIP20	P33891	701 aa		11.85	□□□□□ -0.51
DSK2	YMR276W	RRP1	P35178	278 aa	Predicted RBP	11.85	□□□□□ -0.51
DSK2	YMR276W	CEM1	P39525	442 aa		11.85	□□□□□ -0.51
DSK2	YMR276W	SSU1	P41930	458 aa		11.85	□□□□□ -0.51
DSK2	YMR276W	CCT8	P47079	568 aa	Known RBP	11.85	□□□□□ -0.51
DSK2	YMR276W	RNT1	Q02555	471 aa		11.85	□□□□□ -0.51

Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms