RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W MRPL36P36531 177 aa2.86□□□□□ -1.95
DDR48YMR173W RIM2P38127 377 aa2.86□□□□□ -1.95
DDR48YMR173W ACA1P39970 489 aa2.86□□□□□ -1.95
DDR48YMR173W RPT2P40327 437 aaKnown RBP2.86□□□□□ -1.95
DDR48YMR173W YTP1P53584 459 aa2.86□□□□□ -1.95
DDR48YMR173W IST1P53843 298 aaPredicted RBP2.86□□□□□ -1.95
DDR48YMR173W CIA1Q05583 330 aa2.86□□□□□ -1.95
DDR48YMR173W DAP1Q12091 152 aa2.86□□□□□ -1.95
DDR48YMR173W EDE1P34216 1381 aa2.86□□□□□ -1.95
DDR48YMR173W TY2A-LR1P0C2J4 438 aa2.85□□□□□ -1.95
DDR48YMR173W TY2A-FP0CX61 438 aa2.85□□□□□ -1.95
DDR48YMR173W TY2A-GR2P0CX62 438 aa2.85□□□□□ -1.95
DDR48YMR173W PHO81P17442 1178 aa2.85□□□□□ -1.95
DDR48YMR173W RPB8P20436 146 aa2.85□□□□□ -1.95
DDR48YMR173W MSM1P22438 575 aa2.85□□□□□ -1.95
DDR48YMR173W TY2A-CP25383 438 aa2.85□□□□□ -1.95
DDR48YMR173W SPC34P36131 295 aa2.85□□□□□ -1.95
DDR48YMR173W RFC1P38630 861 aaKnown RBP2.85□□□□□ -1.95
DDR48YMR173W YJR061WP40355 935 aa2.85□□□□□ -1.95
DDR48YMR173W PKP1P40530 394 aa2.85□□□□□ -1.95
DDR48YMR173W GUF1P46943 645 aa2.85□□□□□ -1.95
DDR48YMR173W SMC3P47037 1230 aa2.85□□□□□ -1.95
DDR48YMR173W ARC35P53731 342 aaKnown RBP2.85□□□□□ -1.95
DDR48YMR173W TY2A-DR2Q03483 438 aa2.85□□□□□ -1.95
DDR48YMR173W TY2A-BQ12260 438 aa2.85□□□□□ -1.95
DDR48YMR173W TY2A-OR2Q12293 438 aa2.85□□□□□ -1.95
DDR48YMR173W TY2A-DR1Q12392 438 aa2.85□□□□□ -1.95
DDR48YMR173W TY2A-OR1Q12439 438 aa2.85□□□□□ -1.95
DDR48YMR173W TY2A-DR3Q99303 438 aa2.85□□□□□ -1.95
DDR48YMR173W GLN3P18494 730 aa2.84□□□□□ -1.95
DDR48YMR173W UBC1P21734 215 aaKnown RBP2.84□□□□□ -1.95
DDR48YMR173W GRX7P38068 203 aa2.84□□□□□ -1.95
DDR48YMR173W ARP1P38696 384 aa2.84□□□□□ -1.95
DDR48YMR173W DHH1P39517 506 aaKnown RBP2.84□□□□□ -1.95
DDR48YMR173W DIM1P41819 318 aaKnown RBP2.84□□□□□ -1.95
DDR48YMR173W ROK1P45818 564 aaPredicted RBP2.84□□□□□ -1.95
DDR48YMR173W CTF18P49956 741 aa2.84□□□□□ -1.95
DDR48YMR173W HCR1Q05775 265 aaKnown RBP2.84□□□□□ -1.95
DDR48YMR173W YOL057WQ08225 711 aa2.84□□□□□ -1.95
DDR48YMR173W VCX1Q99385 411 aa2.84□□□□□ -1.95
DDR48YMR173W TRS65P32893 560 aa2.83□□□□□ -1.96
DDR48YMR173W MIC60P36112 540 aa2.83□□□□□ -1.96
DDR48YMR173W NUP100Q02629 959 aa2.83□□□□□ -1.96
DDR48YMR173W SMA2Q04658 369 aa2.83□□□□□ -1.96
DDR48YMR173W YDL218WQ07629 317 aa2.83□□□□□ -1.96
DDR48YMR173W PSR2Q07949 397 aa2.83□□□□□ -1.96
DDR48YMR173W TMA16Q08687 178 aa2.83□□□□□ -1.96
DDR48YMR173W CPR3P25719 182 aa2.82□□□□□ -1.96
DDR48YMR173W CDC15P27636 974 aa2.82□□□□□ -1.96
DDR48YMR173W STV1P37296 890 aa2.82□□□□□ -1.96
DDR48YMR173W ERG7P38604 731 aa2.82□□□□□ -1.96
DDR48YMR173W IST3P40565 148 aaPredicted RBP2.82□□□□□ -1.96
DDR48YMR173W YFR020WP43600 232 aa2.82□□□□□ -1.96
DDR48YMR173W COG1P53079 417 aa2.82□□□□□ -1.96
DDR48YMR173W YNR061CP53747 219 aa2.82□□□□□ -1.96
DDR48YMR173W MRPL13Q02204 264 aa2.82□□□□□ -1.96
DDR48YMR173W RPM2Q02773 1202 aa2.82□□□□□ -1.96
DDR48YMR173W TLG2Q08144 397 aa2.82□□□□□ -1.96
DDR48YMR173W PPT2Q12036 173 aa2.82□□□□□ -1.96
DDR48YMR173W ATG9Q12142 997 aa2.82□□□□□ -1.96
DDR48YMR173W COX17Q12287 69 aa2.82□□□□□ -1.96
DDR48YMR173W ERG27Q12452 347 aaKnown RBP2.82□□□□□ -1.96
DDR48YMR173W NKP1Q12493 238 aa2.82□□□□□ -1.96
DDR48YMR173W TPK1P06244 397 aa2.81□□□□□ -1.96
DDR48YMR173W PRP16P15938 1071 aaPredicted RBP2.81□□□□□ -1.96
DDR48YMR173W XRS2P33301 854 aa2.81□□□□□ -1.96
DDR48YMR173W LOS1P33418 1100 aaPredicted RBP2.81□□□□□ -1.96
DDR48YMR173W ESL2P36168 1195 aa2.81□□□□□ -1.96
DDR48YMR173W RTS1P38903 757 aa2.81□□□□□ -1.96
DDR48YMR173W UIP3P39547 235 aa2.81□□□□□ -1.96
DDR48YMR173W PSF2P40359 213 aa2.81□□□□□ -1.96
DDR48YMR173W YIL060WP40519 144 aa2.81□□□□□ -1.96
DDR48YMR173W AZF1P41696 914 aa2.81□□□□□ -1.96
DDR48YMR173W VPS4P52917 437 aa2.81□□□□□ -1.96
DDR48YMR173W ZDS2P54786 942 aa2.81□□□□□ -1.96
DDR48YMR173W TMA64Q04600 565 aaKnown RBP2.81□□□□□ -1.96
DDR48YMR173W ATG26Q06321 1198 aa2.81□□□□□ -1.96
DDR48YMR173W CSR1Q06705 408 aaKnown RBP2.81□□□□□ -1.96
DDR48YMR173W ARP6Q12509 438 aa2.81□□□□□ -1.96
DDR48YMR173W PCD1Q12524 340 aa2.81□□□□□ -1.96
DDR48YMR173W CSR2Q12734 1121 aa2.81□□□□□ -1.96
DDR48YMR173W HXK2P04807 486 aaKnown RBP2.8□□□□□ -1.96
DDR48YMR173W MRS3P10566 314 aa2.8□□□□□ -1.96
DDR48YMR173W PDA1P16387 420 aaKnown RBP2.8□□□□□ -1.96
DDR48YMR173W PRO3P32263 286 aaKnown RBP2.8□□□□□ -1.96
DDR48YMR173W ERG1P32476 496 aaKnown RBP2.8□□□□□ -1.96
DDR48YMR173W UBA4P38820 440 aa2.8□□□□□ -1.96
DDR48YMR173W YER130CP39959 443 aa2.8□□□□□ -1.96
DDR48YMR173W YTA12P40341 825 aa2.8□□□□□ -1.96
DDR48YMR173W UBX4P54730 416 aa2.8□□□□□ -1.96
DDR48YMR173W INA17Q02888 182 aa2.8□□□□□ -1.96
DDR48YMR173W YDR415CQ04033 374 aaPredicted RBP2.8□□□□□ -1.96
DDR48YMR173W ADE13Q05911 482 aaKnown RBP2.8□□□□□ -1.96
DDR48YMR173W CYB2P00175 591 aa2.79□□□□□ -1.96
DDR48YMR173W NUC1P08466 329 aa2.79□□□□□ -1.96
DDR48YMR173W BUD14P27637 709 aa2.79□□□□□ -1.96
DDR48YMR173W YKL050CP35736 922 aa2.79□□□□□ -1.96
DDR48YMR173W SNU114P36048 1008 aaKnown RBP2.79□□□□□ -1.96
DDR48YMR173W PHD1P36093 366 aa2.79□□□□□ -1.96
DDR48YMR173W IFA38P38286 347 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms