RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C VID30P53076 958 aa3.48□□□□□ -1.85
VPS9YML097C STR3P53101 465 aaKnown RBP3.48□□□□□ -1.85
VPS9YML097C IPI3P53877 555 aa3.48□□□□□ -1.85
VPS9YML097C YML122CQ03207 126 aa3.48□□□□□ -1.85
VPS9YML097C RSM28Q03430 361 aa3.48□□□□□ -1.85
VPS9YML097C YDR131CQ03899 556 aa3.48□□□□□ -1.85
VPS9YML097C RAD33Q04231 177 aa3.48□□□□□ -1.85
VPS9YML097C SGS1P35187 1447 aa3.48□□□□□ -1.85
VPS9YML097C RTC1Q08281 1341 aa3.47□□□□□ -1.85
VPS9YML097C TPK2P06245 380 aa3.47□□□□□ -1.85
VPS9YML097C NAT1P12945 854 aaKnown RBP3.47□□□□□ -1.85
VPS9YML097C PMS1P14242 873 aa3.47□□□□□ -1.85
VPS9YML097C ADK2P26364 225 aa3.47□□□□□ -1.85
VPS9YML097C SEF1P34228 1148 aa3.47□□□□□ -1.85
VPS9YML097C ADE17P38009 592 aaKnown RBP3.47□□□□□ -1.85
VPS9YML097C VBA2P38358 474 aaKnown RBP3.47□□□□□ -1.85
VPS9YML097C LRP1P38801 184 aaKnown RBP3.47□□□□□ -1.85
VPS9YML097C MIT1P40002 666 aa3.47□□□□□ -1.85
VPS9YML097C MRX1P40050 688 aa3.47□□□□□ -1.85
VPS9YML097C JEM1P40358 645 aa3.47□□□□□ -1.85
VPS9YML097C MET28P40573 187 aa3.47□□□□□ -1.85
VPS9YML097C LCB2P40970 561 aa3.47□□□□□ -1.85
VPS9YML097C ZIM17P42844 174 aa3.47□□□□□ -1.85
VPS9YML097C PET130P47065 347 aa3.47□□□□□ -1.85
VPS9YML097C OGG1P53397 376 aaPredicted RBP3.47□□□□□ -1.85
VPS9YML097C ERB1Q04660 807 aaKnown RBP3.47□□□□□ -1.85
VPS9YML097C YLR345WQ06137 509 aa3.47□□□□□ -1.85
VPS9YML097C LUC7Q07508 261 aaPredicted RBP3.47□□□□□ -1.85
VPS9YML097C YOR389WQ08912 624 aa3.47□□□□□ -1.85
VPS9YML097C FMP40Q08968 688 aaPredicted RBP3.47□□□□□ -1.85
VPS9YML097C Q0010Q9ZZX9 128 aa3.47□□□□□ -1.85
VPS9YML097C MF(ALPHA)1P01149 165 aa3.46□□□□□ -1.86
VPS9YML097C HSP82P02829 709 aaKnown RBP3.46□□□□□ -1.86
VPS9YML097C REC107P21651 314 aa3.46□□□□□ -1.86
VPS9YML097C KIN3P22209 435 aa3.46□□□□□ -1.86
VPS9YML097C PAP1P29468 568 aaKnown RBP3.46□□□□□ -1.86
VPS9YML097C PMI40P29952 429 aaKnown RBP3.46□□□□□ -1.86
VPS9YML097C PDB1P32473 366 aaKnown RBP3.46□□□□□ -1.86
VPS9YML097C PMT1P33775 817 aa3.46□□□□□ -1.86
VPS9YML097C YMC2P38087 329 aa3.46□□□□□ -1.86
VPS9YML097C CCT6P39079 546 aa3.46□□□□□ -1.86
VPS9YML097C ECM10P39987 644 aa3.46□□□□□ -1.86
VPS9YML097C ALG5P40350 334 aa3.46□□□□□ -1.86
VPS9YML097C ASG1P40467 964 aa3.46□□□□□ -1.86
VPS9YML097C CCT7P42943 550 aaKnown RBP3.46□□□□□ -1.86
VPS9YML097C YFL015CP43578 164 aa3.46□□□□□ -1.86
VPS9YML097C YFR020WP43600 232 aa3.46□□□□□ -1.86
VPS9YML097C ROK1P45818 564 aaPredicted RBP3.46□□□□□ -1.86
VPS9YML097C ASN1P49089 572 aaKnown RBP3.46□□□□□ -1.86
VPS9YML097C IMD4P50094 524 aaKnown RBP3.46□□□□□ -1.86
VPS9YML097C JJJ1P53863 590 aa3.46□□□□□ -1.86
VPS9YML097C CIK1Q01649 594 aa3.46□□□□□ -1.86
VPS9YML097C MAK10Q02197 733 aa3.46□□□□□ -1.86
VPS9YML097C INA17Q02888 182 aa3.46□□□□□ -1.86
VPS9YML097C DPB4Q04603 196 aaKnown RBP3.46□□□□□ -1.86
VPS9YML097C ARO10Q06408 635 aa3.46□□□□□ -1.86
VPS9YML097C HBT1Q07653 1046 aaKnown RBP3.46□□□□□ -1.86
VPS9YML097C YPL191CQ08930 360 aa3.46□□□□□ -1.86
VPS9YML097C ATG29Q12092 213 aa3.46□□□□□ -1.86
VPS9YML097C AVL9Q12500 764 aa3.46□□□□□ -1.86
VPS9YML097C PAR32Q12515 295 aaKnown RBP3.46□□□□□ -1.86
VPS9YML097C PCT1P13259 424 aa3.45□□□□□ -1.86
VPS9YML097C RPL3P14126 387 aaKnown RBP3.45□□□□□ -1.86
VPS9YML097C PDA1P16387 420 aaKnown RBP3.45□□□□□ -1.86
VPS9YML097C SRP54P20424 541 aaKnown RBP3.45□□□□□ -1.86
VPS9YML097C CLB1P24868 471 aa3.45□□□□□ -1.86
VPS9YML097C TRM2P33753 639 aa3.45□□□□□ -1.86
VPS9YML097C TCD2P36101 447 aaKnown RBP3.45□□□□□ -1.86
VPS9YML097C AAP1P37898 856 aaKnown RBP3.45□□□□□ -1.86
VPS9YML097C YNG2P38806 282 aaKnown RBP3.45□□□□□ -1.86
VPS9YML097C SEC31P38968 1273 aaKnown RBP3.45□□□□□ -1.86
VPS9YML097C DPB11P47027 764 aaPredicted RBP3.45□□□□□ -1.86
VPS9YML097C STB4P50104 949 aa3.45□□□□□ -1.86
VPS9YML097C NNF2P53253 936 aa3.45□□□□□ -1.86
VPS9YML097C CPR8P53728 308 aa3.45□□□□□ -1.86
VPS9YML097C BNI5P53890 448 aaKnown RBP3.45□□□□□ -1.86
VPS9YML097C RPC11Q04307 110 aaPredicted RBP3.45□□□□□ -1.86
VPS9YML097C MRD1Q06106 887 aaKnown RBP3.45□□□□□ -1.86
VPS9YML097C IRC3Q06683 689 aa3.45□□□□□ -1.86
VPS9YML097C ACF2Q12168 779 aa3.45□□□□□ -1.86
VPS9YML097C RLM1Q12224 676 aa3.45□□□□□ -1.86
VPS9YML097C AFI1Q99222 893 aa3.45□□□□□ -1.86
VPS9YML097C ILS1P09436 1072 aaKnown RBP3.44□□□□□ -1.86
VPS9YML097C MRP13P12686 339 aa3.44□□□□□ -1.86
VPS9YML097C CDC43P18898 376 aa3.44□□□□□ -1.86
VPS9YML097C KGD1P20967 1014 aaKnown RBP3.44□□□□□ -1.86
VPS9YML097C ADH7P25377 361 aa3.44□□□□□ -1.86
VPS9YML097C YCR051WP25631 222 aa3.44□□□□□ -1.86
VPS9YML097C PTC6P25646 442 aa3.44□□□□□ -1.86
VPS9YML097C TFB1P32776 642 aa3.44□□□□□ -1.86
VPS9YML097C MDL1P33310 695 aa3.44□□□□□ -1.86
VPS9YML097C RXT2P38255 430 aa3.44□□□□□ -1.86
VPS9YML097C OTU2P38747 307 aaKnown RBP3.44□□□□□ -1.86
VPS9YML097C PTR3P43606 678 aa3.44□□□□□ -1.86
VPS9YML097C YJL055WP47044 245 aa3.44□□□□□ -1.86
VPS9YML097C SUN4P53616 420 aa3.44□□□□□ -1.86
VPS9YML097C HRD3Q05787 833 aa3.44□□□□□ -1.86
VPS9YML097C ECM22Q05958 814 aaPredicted RBP3.44□□□□□ -1.86
VPS9YML097C FMP45Q07651 309 aa3.44□□□□□ -1.86
VPS9YML097C YOL159CQ08300 171 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms