RNA–Protein interactions for RNA: YKR060W

UTP30, Transcript of Putative subunit of U3-containing 90S preribosome complex, yeastyeast

Gene UTP30, Length 825 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP30YKR060W HST1P53685 503 aa2.45□□□□□ -2.02
UTP30YKR060W YNL144CP53907 740 aa2.45□□□□□ -2.02
UTP30YKR060W TEP1P53916 434 aa2.45□□□□□ -2.02
UTP30YKR060W YPL108WQ02872 168 aaPredicted RBP2.45□□□□□ -2.02
UTP30YKR060W TRS130Q03660 1102 aa2.45□□□□□ -2.02
UTP30YKR060W RNH1Q04740 348 aa2.45□□□□□ -2.02
UTP30YKR060W EIS1Q05050 843 aaKnown RBP2.45□□□□□ -2.02
UTP30YKR060W SNA4Q07549 140 aa2.45□□□□□ -2.02
UTP30YKR060W NUC1P08466 329 aa2.44□□□□□ -2.02
UTP30YKR060W PET111P08468 800 aa2.44□□□□□ -2.02
UTP30YKR060W YER190C-BP0CX94 160 aa2.44□□□□□ -2.02
UTP30YKR060W YEL077W-AP0CX95 160 aa2.44□□□□□ -2.02
UTP30YKR060W YGR296C-BP0CX96 160 aa2.44□□□□□ -2.02
UTP30YKR060W YPL283W-BP0CX97 160 aa2.44□□□□□ -2.02
UTP30YKR060W YPR204C-AP0CX98 160 aa2.44□□□□□ -2.02
UTP30YKR060W AAC3P18238 307 aa2.44□□□□□ -2.02
UTP30YKR060W RPB4P20433 221 aaPredicted RBP2.44□□□□□ -2.02
UTP30YKR060W GSH1P32477 678 aa2.44□□□□□ -2.02
UTP30YKR060W MDL1P33310 695 aa2.44□□□□□ -2.02
UTP30YKR060W APM3P38153 483 aa2.44□□□□□ -2.02
UTP30YKR060W RFC1P38630 861 aaKnown RBP2.44□□□□□ -2.02
UTP30YKR060W OTU2P38747 307 aaKnown RBP2.44□□□□□ -2.02
UTP30YKR060W ERC1P38767 581 aa2.44□□□□□ -2.02
UTP30YKR060W BFR1P38934 470 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
UTP30YKR060W STT3P39007 718 aaKnown RBP2.44□□□□□ -2.02
UTP30YKR060W SMK1P41808 388 aa2.44□□□□□ -2.02
UTP30YKR060W YGL260WP53056 76 aa2.44□□□□□ -2.02
UTP30YKR060W YGR079WP53249 370 aa2.44□□□□□ -2.02
UTP30YKR060W MOT3P54785 490 aaKnown RBP2.44□□□□□ -2.02
UTP30YKR060W ATG21Q02887 496 aa2.44□□□□□ -2.02
UTP30YKR060W FCP1Q03254 732 aa2.44□□□□□ -2.02
UTP30YKR060W YMR155WQ03795 547 aa2.44□□□□□ -2.02
UTP30YKR060W ARA2Q04212 335 aa2.44□□□□□ -2.02
UTP30YKR060W TAF11Q04226 346 aa2.44□□□□□ -2.02
UTP30YKR060W YKU80Q04437 629 aa2.44□□□□□ -2.02
UTP30YKR060W YDR109CQ04585 715 aa2.44□□□□□ -2.02
UTP30YKR060W ARV1Q06541 321 aa2.44□□□□□ -2.02
UTP30YKR060W MCP2Q06567 569 aa2.44□□□□□ -2.02
UTP30YKR060W LEA1Q08963 238 aaPredicted RBP2.44□□□□□ -2.02
UTP30YKR060W APL4Q12028 832 aa2.44□□□□□ -2.02
UTP30YKR060W REX3Q12090 404 aa2.44□□□□□ -2.02
UTP30YKR060W RRI1Q12468 440 aa2.44□□□□□ -2.02
UTP30YKR060W ADE3P07245 946 aaKnown RBP2.43□□□□□ -2.02
UTP30YKR060W MSS18P08593 268 aa2.43□□□□□ -2.02
UTP30YKR060W RED1P14291 827 aa2.43□□□□□ -2.02
UTP30YKR060W PDX1P16451 410 aa2.43□□□□□ -2.02
UTP30YKR060W PFK2P16862 959 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
UTP30YKR060W RIT1P23796 513 aa2.43□□□□□ -2.02
UTP30YKR060W SWI4P25302 1093 aaKnown RBP2.43□□□□□ -2.02
UTP30YKR060W LAC1P28496 418 aa2.43□□□□□ -2.02
UTP30YKR060W GCD7P32502 381 aaPredicted RBP2.43□□□□□ -2.02
UTP30YKR060W RPN2P32565 945 aaKnown RBP2.43□□□□□ -2.02
UTP30YKR060W SMI1P32566 505 aa2.43□□□□□ -2.02
UTP30YKR060W SSE1P32589 693 aaKnown RBP2.43□□□□□ -2.02
UTP30YKR060W RIB7P33312 244 aa2.43□□□□□ -2.02
UTP30YKR060W RKM3P38222 552 aa2.43□□□□□ -2.02
UTP30YKR060W ARC40P38328 384 aaKnown RBP2.43□□□□□ -2.02
UTP30YKR060W SPC72P39723 622 aa2.43□□□□□ -2.02
UTP30YKR060W NOP16P40007 231 aaKnown RBP2.43□□□□□ -2.02
UTP30YKR060W ARF3P40994 183 aaRIP-Chip data2.43□□□□□ -2.02not detected
UTP30YKR060W SKP2P42843 763 aa2.43□□□□□ -2.02
UTP30YKR060W QRI7P43122 407 aa2.43□□□□□ -2.02
UTP30YKR060W MDV1P47025 714 aa2.43□□□□□ -2.02
UTP30YKR060W YJL055WP47044 245 aa2.43□□□□□ -2.02
UTP30YKR060W YPT11P48559 417 aa2.43□□□□□ -2.02
UTP30YKR060W YPR003CP53394 754 aa2.43□□□□□ -2.02
UTP30YKR060W YNR061CP53747 219 aa2.43□□□□□ -2.02
UTP30YKR060W CBK1P53894 756 aa2.43□□□□□ -2.02
UTP30YKR060W RPL15BP54780 204 aaPredicted RBP2.43□□□□□ -2.02
UTP30YKR060W VPS9P54787 451 aa2.43□□□□□ -2.02
UTP30YKR060W ADA2Q02336 434 aa2.43□□□□□ -2.02
UTP30YKR060W PRP42Q03776 544 aaKnown RBP2.43□□□□□ -2.02
UTP30YKR060W GYL1Q04322 720 aa2.43□□□□□ -2.02
UTP30YKR060W THI3Q07471 609 aa2.43□□□□□ -2.02
UTP30YKR060W CUE5Q08412 411 aaKnown RBP2.43□□□□□ -2.02
UTP30YKR060W GET3Q12154 354 aaKnown RBP2.43□□□□□ -2.02
UTP30YKR060W SFI1Q12369 946 aa2.43□□□□□ -2.02
UTP30YKR060W RVB2Q12464 471 aaKnown RBP2.43□□□□□ -2.02
UTP30YKR060W YBR255C-AQ3E776 120 aa2.43□□□□□ -2.02
UTP30YKR060W SIR1P21691 654 aa2.42□□□□□ -2.02
UTP30YKR060W GRR1P24814 1151 aa2.42□□□□□ -2.02
UTP30YKR060W YCR006CP25350 157 aa2.42□□□□□ -2.02
UTP30YKR060W GND1P38720 489 aaKnown RBP2.42□□□□□ -2.02
UTP30YKR060W VPS41P38959 992 aa2.42□□□□□ -2.02
UTP30YKR060W UME6P39001 836 aa2.42□□□□□ -2.02
UTP30YKR060W TPA1P40032 644 aaKnown RBP2.42□□□□□ -2.02
UTP30YKR060W AXL1P40851 1208 aa2.42□□□□□ -2.02
UTP30YKR060W AGX1P43567 385 aa2.42□□□□□ -2.02
UTP30YKR060W LYS20P48570 428 aaKnown RBP2.42□□□□□ -2.02
UTP30YKR060W ART5P53244 586 aaKnown RBP2.42□□□□□ -2.02
UTP30YKR060W OGG1P53397 376 aaPredicted RBP2.42□□□□□ -2.02
UTP30YKR060W ALF1P53904 254 aa2.42□□□□□ -2.02
UTP30YKR060W RPT6Q01939 405 aaKnown RBP2.42□□□□□ -2.02
UTP30YKR060W MRPL13Q02204 264 aa2.42□□□□□ -2.02
UTP30YKR060W PEX25Q02969 394 aa2.42□□□□□ -2.02
UTP30YKR060W DPB4Q04603 196 aaKnown RBP2.42□□□□□ -2.02
UTP30YKR060W ATG38Q05789 226 aaKnown RBP2.42□□□□□ -2.02
UTP30YKR060W PDR8Q06149 701 aa2.42□□□□□ -2.02
UTP30YKR060W IWR1Q07532 353 aaPredicted RBP2.42□□□□□ -2.02
UTP30YKR060W ATX2Q12067 313 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms