RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeastyeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC6YJL194W PEX32P38292 413 aa4.41□□□□□ -1.7
CDC6YJL194W TDP1P38319 544 aa4.41□□□□□ -1.7
CDC6YJL194W SLX1P38324 304 aa4.41□□□□□ -1.7
CDC6YJL194W KEL1P38853 1164 aaKnown RBP4.41□□□□□ -1.7
CDC6YJL194W PXA1P41909 870 aa4.41□□□□□ -1.7
CDC6YJL194W GSM1P42950 618 aa4.41□□□□□ -1.7
CDC6YJL194W GCN20P43535 752 aaKnown RBP4.41□□□□□ -1.7
CDC6YJL194W YFL054CP43549 646 aa4.41□□□□□ -1.7
CDC6YJL194W TAH11P47112 604 aa4.41□□□□□ -1.7
CDC6YJL194W MTR3P48240 250 aaPredicted RBP4.41□□□□□ -1.7
CDC6YJL194W EFM5P53200 248 aaKnown RBP4.41□□□□□ -1.7
CDC6YJL194W DUS1P53759 423 aaKnown RBP4.41□□□□□ -1.7
CDC6YJL194W YNL247WP53852 767 aaKnown RBP4.41□□□□□ -1.7
CDC6YJL194W RHO5P53879 331 aaKnown RBP4.41□□□□□ -1.7
CDC6YJL194W EAF7P53911 425 aaKnown RBP4.41□□□□□ -1.7
CDC6YJL194W YPL108WQ02872 168 aaPredicted RBP4.41□□□□□ -1.7
CDC6YJL194W ABZ2Q03266 374 aa4.41□□□□□ -1.7
CDC6YJL194W YML037CQ03703 340 aa4.41□□□□□ -1.7
CDC6YJL194W SMD2Q06217 110 aaKnown RBP4.41□□□□□ -1.7
CDC6YJL194W PEX19Q07418 342 aa4.41□□□□□ -1.7
CDC6YJL194W YEH1Q07804 573 aa4.41□□□□□ -1.7
CDC6YJL194W ICL2Q12031 575 aa4.41□□□□□ -1.7
CDC6YJL194W RBD2Q12270 262 aa4.41□□□□□ -1.7
CDC6YJL194W AVL9Q12500 764 aa4.41□□□□□ -1.7
CDC6YJL194W TRP3P00937 484 aa4.4□□□□□ -1.71
CDC6YJL194W SPS22P25380 463 aa4.4□□□□□ -1.71
CDC6YJL194W RPS7AP26786 190 aaKnown RBP4.4□□□□□ -1.71
CDC6YJL194W SYN8P31377 255 aa4.4□□□□□ -1.71
CDC6YJL194W COT1P32798 439 aa4.4□□□□□ -1.71
CDC6YJL194W YPT7P32939 208 aa4.4□□□□□ -1.71
CDC6YJL194W YKR073CP36153 106 aa4.4□□□□□ -1.71
CDC6YJL194W PXL1P36166 706 aa4.4□□□□□ -1.71
CDC6YJL194W MRPL37P36532 105 aa4.4□□□□□ -1.71
CDC6YJL194W RRT2P38332 387 aa4.4□□□□□ -1.71
CDC6YJL194W SLZ1P40167 298 aa4.4□□□□□ -1.71
CDC6YJL194W YTA12P40341 825 aa4.4□□□□□ -1.71
CDC6YJL194W YFR018CP43599 363 aa4.4□□□□□ -1.71
CDC6YJL194W DLD2P46681 530 aaKnown RBP4.4□□□□□ -1.71
CDC6YJL194W EMC2P47133 292 aaKnown RBP4.4□□□□□ -1.71
CDC6YJL194W RAI1P53063 387 aaKnown RBP4.4□□□□□ -1.71
CDC6YJL194W LEE1Q02799 301 aaKnown RBP4.4□□□□□ -1.71
CDC6YJL194W MUB1Q03162 620 aa4.4□□□□□ -1.71
CDC6YJL194W NGL2Q03264 515 aaKnown RBP4.4□□□□□ -1.71
CDC6YJL194W RQC1Q05468 723 aaKnown RBP4.4□□□□□ -1.71
CDC6YJL194W BCP1Q06338 283 aa4.4□□□□□ -1.71
CDC6YJL194W VAM6Q07468 1049 aa4.4□□□□□ -1.71
CDC6YJL194W SGO1Q08490 590 aa4.4□□□□□ -1.71
CDC6YJL194W HMI1Q12039 706 aa4.4□□□□□ -1.71
CDC6YJL194W ISN1Q99312 450 aa4.4□□□□□ -1.71
CDC6YJL194W REV3P14284 1504 aa4.4□□□□□ -1.71
CDC6YJL194W YML133CQ03099 1374 aa4.4□□□□□ -1.71
CDC6YJL194W YLL067CQ07888 1374 aa4.4□□□□□ -1.71
CDC6YJL194W YLL066CQ99208 1374 aa4.4□□□□□ -1.71
CDC6YJL194W SUP35P05453 685 aaKnown RBP4.39□□□□□ -1.71
CDC6YJL194W TPK2P06245 380 aa4.39□□□□□ -1.71
CDC6YJL194W RPL3P14126 387 aaKnown RBP4.39□□□□□ -1.71
CDC6YJL194W DAP2P18962 818 aa4.39□□□□□ -1.71
CDC6YJL194W KRE6P32486 720 aa4.39□□□□□ -1.71
CDC6YJL194W RPD3P32561 433 aa4.39□□□□□ -1.71
CDC6YJL194W PET127P32606 800 aa4.39□□□□□ -1.71
CDC6YJL194W CBF5P33322 483 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
CDC6YJL194W CMC1P36064 111 aa4.39□□□□□ -1.71
CDC6YJL194W MMS4P38257 691 aa4.39□□□□□ -1.71
CDC6YJL194W TOS1P38288 455 aa4.39□□□□□ -1.71
CDC6YJL194W TOM71P38825 639 aaKnown RBP4.39□□□□□ -1.71
CDC6YJL194W PZF1P39933 429 aa4.39□□□□□ -1.71
CDC6YJL194W LRO1P40345 661 aa4.39□□□□□ -1.71
CDC6YJL194W YIL108WP40483 696 aaKnown RBP4.39□□□□□ -1.71
CDC6YJL194W ULP2P40537 1034 aaPredicted RBP4.39□□□□□ -1.71
CDC6YJL194W VID30P53076 958 aa4.39□□□□□ -1.71
CDC6YJL194W MTC3P53077 123 aa4.39□□□□□ -1.71
CDC6YJL194W CLU1Q03690 1277 aaKnown RBP4.39□□□□□ -1.71
CDC6YJL194W ATC1Q04005 294 aa4.39□□□□□ -1.71
CDC6YJL194W VPS38Q05919 439 aa4.39□□□□□ -1.71
CDC6YJL194W VTA1Q06263 330 aa4.39□□□□□ -1.71
CDC6YJL194W BUD7Q08754 746 aa4.39□□□□□ -1.71
CDC6YJL194W YPT6Q99260 215 aa4.39□□□□□ -1.71
CDC6YJL194W HIR3P47171 1648 aa4.39□□□□□ -1.71
CDC6YJL194W TY1B-DR4Q07793 1604 aa4.39□□□□□ -1.71
CDC6YJL194W BUD4P47136 1447 aa4.38□□□□□ -1.71
CDC6YJL194W CAR2P07991 424 aaKnown RBP4.38□□□□□ -1.71
CDC6YJL194W UNG1P12887 359 aa4.38□□□□□ -1.71
CDC6YJL194W FRS1P15624 595 aaKnown RBP4.38□□□□□ -1.71
CDC6YJL194W CAD1P24813 409 aaKnown RBP4.38□□□□□ -1.71
CDC6YJL194W MCM4P30665 933 aaKnown RBP4.38□□□□□ -1.71
CDC6YJL194W KKQ8P36004 724 aa4.38□□□□□ -1.71
CDC6YJL194W LIN1P38852 340 aaPredicted RBP4.38□□□□□ -1.71
CDC6YJL194W MCM6P53091 1017 aaKnown RBP4.38□□□□□ -1.71
CDC6YJL194W PRM1P53835 661 aa4.38□□□□□ -1.71
CDC6YJL194W RPA49Q01080 415 aaPredicted RBP4.38□□□□□ -1.71
CDC6YJL194W TRS31Q03337 283 aa4.38□□□□□ -1.71
CDC6YJL194W BUD22Q04347 519 aaKnown RBP4.38□□□□□ -1.71
CDC6YJL194W SOV1Q04748 898 aa4.38□□□□□ -1.71
CDC6YJL194W MSC3Q05812 728 aa4.38□□□□□ -1.71
CDC6YJL194W ADY4Q05955 493 aa4.38□□□□□ -1.71
CDC6YJL194W LEU9Q12166 604 aaKnown RBP4.38□□□□□ -1.71
CDC6YJL194W SUL2Q12325 893 aa4.38□□□□□ -1.71
CDC6YJL194W CBP2P03874 630 aaPredicted RBP4.37□□□□□ -1.71
CDC6YJL194W LPD1P09624 499 aaKnown RBP4.37□□□□□ -1.71
CDC6YJL194W PYC1P11154 1178 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms