RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C NUP100Q02629 959 aa3.41□□□□□ -1.86
SHQ1YIL104C YDR131CQ03899 556 aa3.41□□□□□ -1.86
SHQ1YIL104C RPC11Q04307 110 aaPredicted RBP3.41□□□□□ -1.86
SHQ1YIL104C AVO1Q08236 1176 aa3.41□□□□□ -1.86
SHQ1YIL104C IMA2Q08295 589 aa3.41□□□□□ -1.86
SHQ1YIL104C YLL056CQ12177 298 aa3.41□□□□□ -1.86
SHQ1YIL104C ZRT2Q12436 422 aa3.41□□□□□ -1.86
SHQ1YIL104C MSB2P32334 1306 aa3.4□□□□□ -1.86
SHQ1YIL104C CMD1P06787 147 aaKnown RBP3.4□□□□□ -1.86
SHQ1YIL104C RPB2P08518 1224 aaKnown RBP3.4□□□□□ -1.86
SHQ1YIL104C SST2P11972 698 aaKnown RBP3.4□□□□□ -1.86
SHQ1YIL104C HSP26P15992 214 aaKnown RBP RIP-Chip data3.4□□□□□ -1.86not detected
SHQ1YIL104C MSH2P25847 964 aa3.4□□□□□ -1.86
SHQ1YIL104C CIN8P27895 1000 aa3.4□□□□□ -1.86
SHQ1YIL104C GDA1P32621 518 aa3.4□□□□□ -1.86
SHQ1YIL104C MRS6P32864 603 aaKnown RBP3.4□□□□□ -1.86
SHQ1YIL104C CKB2P38930 258 aa3.4□□□□□ -1.86
SHQ1YIL104C MAD1P40957 749 aa3.4□□□□□ -1.86
SHQ1YIL104C GYP8P43570 497 aa3.4□□□□□ -1.86
SHQ1YIL104C MIC19P43594 170 aa3.4□□□□□ -1.86
SHQ1YIL104C BUD13P46947 266 aaPredicted RBP3.4□□□□□ -1.86
SHQ1YIL104C MNN11P46985 422 aaKnown RBP3.4□□□□□ -1.86
SHQ1YIL104C GLG2P47011 380 aa3.4□□□□□ -1.86
SHQ1YIL104C IML2P47031 731 aa3.4□□□□□ -1.86
SHQ1YIL104C HLJ1P48353 224 aa3.4□□□□□ -1.86
SHQ1YIL104C PYK2P52489 506 aaKnown RBP3.4□□□□□ -1.86
SHQ1YIL104C YGL140CP53120 1219 aa3.4□□□□□ -1.86
SHQ1YIL104C COP1P53622 1201 aaKnown RBP3.4□□□□□ -1.86
SHQ1YIL104C SNO2P53823 222 aa3.4□□□□□ -1.86
SHQ1YIL104C AQR1P53943 586 aa3.4□□□□□ -1.86
SHQ1YIL104C VAC7P53950 1165 aa3.4□□□□□ -1.86
SHQ1YIL104C ENT5Q03769 411 aaKnown RBP3.4□□□□□ -1.86
SHQ1YIL104C BUD22Q04347 519 aaKnown RBP3.4□□□□□ -1.86
SHQ1YIL104C SAM4Q08985 325 aaKnown RBP3.4□□□□□ -1.86
SHQ1YIL104C NOP14Q99207 810 aaKnown RBP3.4□□□□□ -1.86
SHQ1YIL104C CET1O13297 549 aaPredicted RBP3.39□□□□□ -1.87
SHQ1YIL104C YLR358CO13565 187 aa3.39□□□□□ -1.87
SHQ1YIL104C RPS13P05756 151 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C GLN4P13188 809 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C AMD1P15274 810 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C RPO26P20435 155 aa3.39□□□□□ -1.87
SHQ1YIL104C DAL81P21657 970 aa3.39□□□□□ -1.87
SHQ1YIL104C MIH1P23748 554 aa3.39□□□□□ -1.87
SHQ1YIL104C PHO3P24031 467 aa3.39□□□□□ -1.87
SHQ1YIL104C RBK1P25332 333 aa3.39□□□□□ -1.87
SHQ1YIL104C HCM1P25364 564 aa3.39□□□□□ -1.87
SHQ1YIL104C YEL043WP32618 956 aa3.39□□□□□ -1.87
SHQ1YIL104C RAD5P32849 1169 aaPredicted RBP3.39□□□□□ -1.87
SHQ1YIL104C PMT1P33775 817 aa3.39□□□□□ -1.87
SHQ1YIL104C ADD66P36040 267 aa3.39□□□□□ -1.87
SHQ1YIL104C BYE1P36106 594 aa3.39□□□□□ -1.87
SHQ1YIL104C POP4P38336 279 aa3.39□□□□□ -1.87
SHQ1YIL104C GGA2P38817 585 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C VAC8P39968 578 aa3.39□□□□□ -1.87
SHQ1YIL104C ROK1P45818 564 aaPredicted RBP3.39□□□□□ -1.87
SHQ1YIL104C SAE2P46946 345 aa3.39□□□□□ -1.87
SHQ1YIL104C YJL132WP47014 750 aa3.39□□□□□ -1.87
SHQ1YIL104C PRP31P49704 494 aaPredicted RBP3.39□□□□□ -1.87
SHQ1YIL104C MNT2P53059 558 aa3.39□□□□□ -1.87
SHQ1YIL104C FRE4P53746 719 aa3.39□□□□□ -1.87
SHQ1YIL104C PRM1P53835 661 aa3.39□□□□□ -1.87
SHQ1YIL104C IMP4P53941 290 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C RPL22BP56628 122 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C PEX13P80667 386 aa3.39□□□□□ -1.87
SHQ1YIL104C SMA1Q02651 245 aa3.39□□□□□ -1.87
SHQ1YIL104C HOS3Q02959 697 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C CLU1Q03690 1277 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C USA1Q03714 838 aa3.39□□□□□ -1.87
SHQ1YIL104C ADE13Q05911 482 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C SFH1Q06168 426 aa3.39□□□□□ -1.87
SHQ1YIL104C ATG23Q06671 453 aa3.39□□□□□ -1.87
SHQ1YIL104C YDL073WQ07454 984 aa3.39□□□□□ -1.87
SHQ1YIL104C CUE5Q08412 411 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C PUS7Q08647 676 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C TRE2Q08693 809 aa3.39□□□□□ -1.87
SHQ1YIL104C NUR1Q12066 484 aa3.39□□□□□ -1.87
SHQ1YIL104C PNS1Q12412 539 aa3.39□□□□□ -1.87
SHQ1YIL104C SEY1Q99287 776 aa3.39□□□□□ -1.87
SHQ1YIL104C SCH9P11792 824 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C INO1P11986 533 aa3.39□□□□□ -1.87
SHQ1YIL104C HOM2P13663 365 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C URA7P28274 579 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C AEP1P32493 518 aa3.39□□□□□ -1.87
SHQ1YIL104C SMI1P32566 505 aa3.39□□□□□ -1.87
SHQ1YIL104C CNS1P33313 385 aa3.39□□□□□ -1.87
SHQ1YIL104C TCD2P36101 447 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C SRP68P38687 599 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C SMF2P38778 549 aa3.39□□□□□ -1.87
SHQ1YIL104C SCC4P40090 624 aa3.39□□□□□ -1.87
SHQ1YIL104C SMX2P40204 77 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C RAD26P40352 1085 aa3.39□□□□□ -1.87
SHQ1YIL104C IST3P40565 148 aaPredicted RBP3.39□□□□□ -1.87
SHQ1YIL104C SAP4P53036 818 aa3.39□□□□□ -1.87
SHQ1YIL104C SIW14P53965 281 aa3.39□□□□□ -1.87
SHQ1YIL104C CDC14Q00684 551 aa3.39□□□□□ -1.87
SHQ1YIL104C MET14Q02196 202 aa3.39□□□□□ -1.87
SHQ1YIL104C SLU7Q02775 382 aaKnown RBP3.39□□□□□ -1.87
SHQ1YIL104C VPS60Q03390 229 aa3.39□□□□□ -1.87
SHQ1YIL104C JIP5Q06214 492 aaPredicted RBP3.39□□□□□ -1.87
SHQ1YIL104C CLP1Q08685 445 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms