RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	NEW1	Q08972	1196 aa	Known RBP	3.23	□□□□□ -1.89
VHR1	YIL056W	SKM1	Q12469	655 aa		3.23	□□□□□ -1.89
VHR1	YIL056W	CBP1	P07252	654 aa		3.22	□□□□□ -1.89
VHR1	YIL056W	RPL42A	P0CX27	106 aa	Known RBP	3.22	□□□□□ -1.89
VHR1	YIL056W	RPL42B	P0CX28	106 aa	Known RBP	3.22	□□□□□ -1.89
VHR1	YIL056W	LCB1	P25045	558 aa	Known RBP	3.22	□□□□□ -1.89
VHR1	YIL056W	SSH4	P32343	579 aa		3.22	□□□□□ -1.89
VHR1	YIL056W	SAC1	P32368	623 aa	Known RBP	3.22	□□□□□ -1.89
VHR1	YIL056W	ATO2	P32907	282 aa		3.22	□□□□□ -1.89
VHR1	YIL056W	YER010C	P40011	234 aa		3.22	□□□□□ -1.89
VHR1	YIL056W	IRC8	P47046	822 aa		3.22	□□□□□ -1.89
VHR1	YIL056W	ECI1	Q05871	280 aa		3.22	□□□□□ -1.89
VHR1	YIL056W	APL4	Q12028	832 aa		3.22	□□□□□ -1.89
VHR1	YIL056W	VCX1	Q99385	411 aa		3.22	□□□□□ -1.89
VHR1	YIL056W	SRP54	P20424	541 aa	Known RBP	3.21	□□□□□ -1.9
VHR1	YIL056W	ALY1	P36117	915 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	AXL2	P38928	823 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	PSD1	P39006	500 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	SAD1	P43589	448 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	LYS20	P48570	428 aa	Known RBP	3.21	□□□□□ -1.9
VHR1	YIL056W	SGF73	P53165	657 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	LSC1	P53598	329 aa	Known RBP	3.21	□□□□□ -1.9
VHR1	YIL056W	YDR415C	Q04033	374 aa	Predicted RBP	3.21	□□□□□ -1.9
VHR1	YIL056W	RLP24	Q07915	199 aa	Known RBP	3.21	□□□□□ -1.9
VHR1	YIL056W	YJR061W	P40355	935 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	BNA1	P47096	177 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	ZDS2	P54786	942 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	YMR034C	Q05131	434 aa	Predicted RBP	3.21	□□□□□ -1.9
VHR1	YIL056W	SKG3	Q06315	1026 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	PSR1	Q07800	427 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	PSK2	Q08217	1101 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	BUD7	Q08754	746 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	TCO89	Q08921	799 aa		3.21	□□□□□ -1.9
VHR1	YIL056W	MRP20	P32387	263 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	RPN12	P32496	274 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	NFU1	P32860	256 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	YKL050C	P35736	922 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	VPS41	P38959	992 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	AFG3	P39925	761 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	SEC24	P40482	926 aa	Known RBP	3.2	□□□□□ -1.9
VHR1	YIL056W	DPB11	P47027	764 aa	Predicted RBP	3.2	□□□□□ -1.9
VHR1	YIL056W	SMC3	P47037	1230 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	MUB1	Q03162	620 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	ARP10	Q04549	284 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	RCO1	Q04779	684 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	SSP2	Q08646	371 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	YOR111W	Q99210	232 aa		3.2	□□□□□ -1.9
VHR1	YIL056W	VMA16	P23968	213 aa		3.19	□□□□□ -1.9
VHR1	YIL056W	YCP4	P25349	247 aa	Known RBP	3.19	□□□□□ -1.9
VHR1	YIL056W	GEX2	P36173	615 aa		3.19	□□□□□ -1.9
VHR1	YIL056W	YPL068C	Q02749	293 aa		3.19	□□□□□ -1.9
VHR1	YIL056W	CHO1	P08456	276 aa		3.19	□□□□□ -1.9
VHR1	YIL056W	KRS1	P15180	591 aa	Known RBP	3.19	□□□□□ -1.9
VHR1	YIL056W	STE50	P25344	346 aa		3.19	□□□□□ -1.9
VHR1	YIL056W	YIL169C	P40442	995 aa		3.19	□□□□□ -1.9
VHR1	YIL056W	BSC5	P53755	489 aa		3.19	□□□□□ -1.9
VHR1	YIL056W	YNL181W	P53878	407 aa		3.19	□□□□□ -1.9
VHR1	YIL056W	ERP4	Q12450	207 aa		3.19	□□□□□ -1.9
VHR1	YIL056W	FUM1	P08417	488 aa	Known RBP	3.18	□□□□□ -1.9
VHR1	YIL056W	CDC24	P11433	854 aa	Predicted RBP	3.18	□□□□□ -1.9
VHR1	YIL056W	BLI1	P35727	113 aa		3.18	□□□□□ -1.9
VHR1	YIL056W	RTS1	P38903	757 aa		3.18	□□□□□ -1.9
VHR1	YIL056W	MET30	P39014	640 aa		3.18	□□□□□ -1.9
VHR1	YIL056W	SLZ1	P40167	298 aa		3.18	□□□□□ -1.9
VHR1	YIL056W	PKP1	P40530	394 aa		3.18	□□□□□ -1.9
VHR1	YIL056W	MPP10	P47083	593 aa	Known RBP	3.18	□□□□□ -1.9
VHR1	YIL056W	RPS7B	P48164	190 aa	Known RBP	3.18	□□□□□ -1.9
VHR1	YIL056W	SCS3	P53012	380 aa		3.18	□□□□□ -1.9
VHR1	YIL056W	YTP1	P53584	459 aa		3.18	□□□□□ -1.9
VHR1	YIL056W	ASI1	P54074	624 aa		3.18	□□□□□ -1.9
VHR1	YIL056W	DIG1	Q03063	452 aa	Known RBP	3.18	□□□□□ -1.9
VHR1	YIL056W	CTL1	Q03220	320 aa	Known RBP	3.18	□□□□□ -1.9
VHR1	YIL056W	NUP53	Q03790	475 aa		3.18	□□□□□ -1.9
VHR1	YIL056W	TFC6	Q06339	672 aa		3.18	□□□□□ -1.9
VHR1	YIL056W	GPN2	Q08726	347 aa	Predicted RBP	3.18	□□□□□ -1.9
VHR1	YIL056W	EDE1	P34216	1381 aa		3.18	□□□□□ -1.9
VHR1	YIL056W	RPB2	P08518	1224 aa	Known RBP	3.17	□□□□□ -1.9
VHR1	YIL056W	DAL5	P15365	543 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	MNN2	P38069	597 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	AGP2	P38090	596 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	YBL029W	P38201	376 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	ARC40	P38328	384 aa	Known RBP	3.17	□□□□□ -1.9
VHR1	YIL056W	DIA3	P52290	468 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	YMR178W	Q03219	274 aa	Known RBP	3.17	□□□□□ -1.9
VHR1	YIL056W	CAC2	Q04199	468 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	YDL218W	Q07629	317 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	ENT4	Q07872	247 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	MLH2	Q07980	695 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	RDR1	Q08904	546 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	INP53	Q12271	1107 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	PDR3	P33200	976 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	OPY2	Q06810	360 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	HUA2	Q12134	243 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	SNU66	Q12420	587 aa	Predicted RBP	3.17	□□□□□ -1.9
VHR1	YIL056W	ENT1	Q12518	454 aa		3.17	□□□□□ -1.9
VHR1	YIL056W	TRS65	P32893	560 aa		3.16	□□□□□ -1.9
VHR1	YIL056W	MAL33	P38157	468 aa		3.16	□□□□□ -1.9
VHR1	YIL056W	DBP8	P38719	431 aa		3.16	□□□□□ -1.9
VHR1	YIL056W	YEL068C	P39977	110 aa		3.16	□□□□□ -1.9
VHR1	YIL056W	LYS14	P40971	790 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms