RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C RPT1P33299 467 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C MTG2P38860 518 aa2.77□□□□□ -1.97
PRP8YHR165C DSS1P39112 969 aa2.77□□□□□ -1.97
PRP8YHR165C MET12P46151 657 aa2.77□□□□□ -1.97
PRP8YHR165C MRX5P47007 382 aa2.77□□□□□ -1.97
PRP8YHR165C PTK2P47116 818 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C SPC98P53540 846 aa2.77□□□□□ -1.97
PRP8YHR165C NUT2Q06213 157 aa2.77□□□□□ -1.97
PRP8YHR165C PUS9Q12069 462 aa2.77□□□□□ -1.97
PRP8YHR165C YPR089WO13585 888 aa2.77□□□□□ -1.97
PRP8YHR165C CMD1P06787 147 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C CLB2P24869 491 aa2.77□□□□□ -1.97
PRP8YHR165C RAD51P25454 400 aa2.77□□□□□ -1.97
PRP8YHR165C PMI40P29952 429 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C FUN26P31381 517 aa2.77□□□□□ -1.97
PRP8YHR165C GCG1P32656 232 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C DHR2P36009 735 aaPredicted RBP2.77□□□□□ -1.97
PRP8YHR165C PBP2P38151 413 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
PRP8YHR165C ALP1P38971 573 aa2.77□□□□□ -1.97
PRP8YHR165C EFM4P40516 257 aa2.77□□□□□ -1.97
PRP8YHR165C YFL052WP43551 465 aa2.77□□□□□ -1.97
PRP8YHR165C CTF19Q02732 369 aa2.77□□□□□ -1.97
PRP8YHR165C YDR109CQ04585 715 aa2.77□□□□□ -1.97
PRP8YHR165C TRM13Q12383 476 aa2.77□□□□□ -1.97
PRP8YHR165C YCL001W-BQ96VH2 84 aa2.77□□□□□ -1.97
PRP8YHR165C RPP1AP05318 106 aaPredicted RBP2.77□□□□□ -1.97
PRP8YHR165C NPR1P22211 790 aa2.77□□□□□ -1.97
PRP8YHR165C SPO23P33757 523 aa2.77□□□□□ -1.97
PRP8YHR165C UGA2P38067 497 aa2.77□□□□□ -1.97
PRP8YHR165C TDA11P38854 504 aa2.77□□□□□ -1.97
PRP8YHR165C RTS2P40962 232 aa2.77□□□□□ -1.97
PRP8YHR165C VOA1P53262 265 aa2.77□□□□□ -1.97
PRP8YHR165C GTR2P53290 341 aa2.77□□□□□ -1.97
PRP8YHR165C YNL260CP53846 198 aa2.77□□□□□ -1.97
PRP8YHR165C RVB1Q03940 463 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C YLR173WQ06247 608 aa2.77□□□□□ -1.97
PRP8YHR165C OPT2Q06593 877 aa2.77□□□□□ -1.97
PRP8YHR165C PUS7Q08647 676 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C RTT10Q08924 1013 aa2.77□□□□□ -1.97
PRP8YHR165C YDR018CQ12185 396 aa2.77□□□□□ -1.97
PRP8YHR165C SPE1P08432 466 aa2.77□□□□□ -1.97
PRP8YHR165C RIT1P23796 513 aa2.77□□□□□ -1.97
PRP8YHR165C STE14P32584 239 aa2.77□□□□□ -1.97
PRP8YHR165C YKT6P36015 200 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C JEN1P36035 616 aa2.77□□□□□ -1.97
PRP8YHR165C AAP1P37898 856 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C SHG1P38337 142 aa2.77□□□□□ -1.97
PRP8YHR165C UIP3P39547 235 aa2.77□□□□□ -1.97
PRP8YHR165C OAF1P39720 1047 aaPredicted RBP2.77□□□□□ -1.97
PRP8YHR165C UBP5P39944 805 aa2.77□□□□□ -1.97
PRP8YHR165C GLC8P41818 229 aa2.77□□□□□ -1.97
PRP8YHR165C APS3P47064 194 aa2.77□□□□□ -1.97
PRP8YHR165C CSN12P47130 423 aa2.77□□□□□ -1.97
PRP8YHR165C CRD1Q07560 283 aa2.77□□□□□ -1.97
PRP8YHR165C REX3Q12090 404 aa2.77□□□□□ -1.97
PRP8YHR165C SWT1Q12104 458 aa2.77□□□□□ -1.97
PRP8YHR165C RIO1Q12196 484 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C AGC1Q12482 902 aa2.77□□□□□ -1.97
PRP8YHR165C RPP2BP02400 110 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C TIR1P10863 254 aa2.77□□□□□ -1.97
PRP8YHR165C GCD2P12754 651 aaPredicted RBP2.77□□□□□ -1.97
PRP8YHR165C RPL3P14126 387 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C FAA1P30624 700 aaKnown RBP2.77□□□□□ -1.97
PRP8YHR165C SUV3P32580 737 aa2.77□□□□□ -1.97
PRP8YHR165C EMC3P36039 253 aa2.77□□□□□ -1.97
PRP8YHR165C SMK1P41808 388 aa2.77□□□□□ -1.97
PRP8YHR165C RGD2P43556 714 aa2.77□□□□□ -1.97
PRP8YHR165C PMT3P47190 753 aa2.77□□□□□ -1.97
PRP8YHR165C YGL117WP53133 265 aa2.77□□□□□ -1.97
PRP8YHR165C FAP1P53971 965 aa2.77□□□□□ -1.97
PRP8YHR165C YDR541CQ03049 344 aa2.77□□□□□ -1.97
PRP8YHR165C SDH7Q04401 133 aa2.77□□□□□ -1.97
PRP8YHR165C LIP2Q06005 328 aa2.77□□□□□ -1.97
PRP8YHR165C SSP2Q08646 371 aa2.77□□□□□ -1.97
PRP8YHR165C RSA1Q08932 381 aa2.77□□□□□ -1.97
PRP8YHR165C YPL260WQ08977 551 aa2.77□□□□□ -1.97
PRP8YHR165C PDE2P06776 526 aa2.76□□□□□ -1.97
PRP8YHR165C SSA3P09435 649 aaKnown RBP2.76□□□□□ -1.97
PRP8YHR165C SAC7P17121 654 aa2.76□□□□□ -1.97
PRP8YHR165C PUF4P25339 888 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97 RIP-Chip
PRP8YHR165C SRO9P25567 434 aaKnown RBP2.76□□□□□ -1.97
PRP8YHR165C GAC1P28006 793 aa2.76□□□□□ -1.97
PRP8YHR165C RAD24P32641 659 aa2.76□□□□□ -1.97
PRP8YHR165C PSY4P38193 441 aa2.76□□□□□ -1.97
PRP8YHR165C YGR054WP53235 642 aaKnown RBP2.76□□□□□ -1.97
PRP8YHR165C DAD3P69850 94 aa2.76□□□□□ -1.97
PRP8YHR165C VPS28Q02767 242 aa2.76□□□□□ -1.97
PRP8YHR165C YTM1Q12024 460 aaPredicted RBP2.76□□□□□ -1.97
PRP8YHR165C LAM4P38800 1345 aa2.76□□□□□ -1.97
PRP8YHR165C ATP6P00854 259 aa2.76□□□□□ -1.97
PRP8YHR165C YPT1P01123 206 aaKnown RBP2.76□□□□□ -1.97
PRP8YHR165C LEU1P07264 779 aaKnown RBP2.76□□□□□ -1.97
PRP8YHR165C FUM1P08417 488 aaKnown RBP2.76□□□□□ -1.97
PRP8YHR165C MAG1P22134 296 aaKnown RBP2.76□□□□□ -1.97
PRP8YHR165C YCR051WP25631 222 aa2.76□□□□□ -1.97
PRP8YHR165C SKT5P34226 696 aa2.76□□□□□ -1.97
PRP8YHR165C TGL3P40308 642 aa2.76□□□□□ -1.97
PRP8YHR165C YJR061WP40355 935 aa2.76□□□□□ -1.97
PRP8YHR165C SHQ1P40486 507 aaPredicted RBP2.76□□□□□ -1.97
PRP8YHR165C ALD2P47771 506 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms