RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W RMI1Q02685 241 aa7.5□□□□□ -1.21
PEX28YHR150W SMP3Q04174 516 aa7.5□□□□□ -1.21
PEX28YHR150W HSP31Q04432 237 aa7.5□□□□□ -1.21
PEX28YHR150W MSH5Q12175 901 aa7.5□□□□□ -1.21
PEX28YHR150W AFI1Q99222 893 aa7.5□□□□□ -1.21
PEX28YHR150W PRC1P00729 532 aa7.49□□□□□ -1.21
PEX28YHR150W TPK2P06245 380 aa7.49□□□□□ -1.21
PEX28YHR150W ATP1P07251 545 aaKnown RBP7.49□□□□□ -1.21
PEX28YHR150W MIS1P09440 975 aaKnown RBP7.49□□□□□ -1.21
PEX28YHR150W NSP1P14907 823 aaKnown RBP7.49□□□□□ -1.21
PEX28YHR150W CCA1P21269 546 aa7.49□□□□□ -1.21
PEX28YHR150W SPB1P25582 841 aaPredicted RBP7.49□□□□□ -1.21
PEX28YHR150W YCR090CP25654 182 aaKnown RBP7.49□□□□□ -1.21
PEX28YHR150W ATP7P30902 174 aa7.49□□□□□ -1.21
PEX28YHR150W YBR138CP38277 524 aa7.49□□□□□ -1.21
PEX28YHR150W YJR061WP40355 935 aa7.49□□□□□ -1.21
PEX28YHR150W OPT1P40897 799 aa7.49□□□□□ -1.21
PEX28YHR150W EMC2P47133 292 aaKnown RBP7.49□□□□□ -1.21
PEX28YHR150W FOL2P51601 243 aaKnown RBP7.49□□□□□ -1.21
PEX28YHR150W SIW14P53965 281 aa7.49□□□□□ -1.21
PEX28YHR150W CEG1Q01159 459 aaPredicted RBP7.49□□□□□ -1.21
PEX28YHR150W RAD30Q04049 632 aa7.49□□□□□ -1.21
PEX28YHR150W ECM22Q05958 814 aaPredicted RBP7.49□□□□□ -1.21
PEX28YHR150W GMC2Q06201 188 aa7.49□□□□□ -1.21
PEX28YHR150W MRI1Q06489 411 aaKnown RBP7.49□□□□□ -1.21
PEX28YHR150W SGT1Q08446 395 aa7.49□□□□□ -1.21
PEX28YHR150W ULA1Q12059 462 aa7.49□□□□□ -1.21
PEX28YHR150W NSL1Q12143 216 aa7.49□□□□□ -1.21
PEX28YHR150W RVS161P25343 265 aaKnown RBP7.49□□□□□ -1.21
PEX28YHR150W CSM1P25651 190 aa7.49□□□□□ -1.21
PEX28YHR150W RAD27P26793 382 aa7.49□□□□□ -1.21
PEX28YHR150W DSS4P32601 143 aa7.49□□□□□ -1.21
PEX28YHR150W MDJ1P35191 511 aa7.49□□□□□ -1.21
PEX28YHR150W GRS1P38088 690 aaKnown RBP7.49□□□□□ -1.21
PEX28YHR150W YBR225WP38321 900 aa7.49□□□□□ -1.21
PEX28YHR150W YHB1P39676 399 aaKnown RBP7.49□□□□□ -1.21
PEX28YHR150W SEO1P39709 593 aa7.49□□□□□ -1.21
PEX28YHR150W SLX8P40072 274 aa7.49□□□□□ -1.21
PEX28YHR150W YJR154WP47181 346 aa7.49□□□□□ -1.21
PEX28YHR150W SHE4P51534 789 aa7.49□□□□□ -1.21
PEX28YHR150W PEX8P53248 589 aa7.49□□□□□ -1.21
PEX28YHR150W YNL033WP53964 284 aa7.49□□□□□ -1.21
PEX28YHR150W YNL019CP53975 284 aa7.49□□□□□ -1.21
PEX28YHR150W GRX8Q05926 109 aa7.49□□□□□ -1.21
PEX28YHR150W MRN1Q08925 612 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
PEX28YHR150W IES3Q12345 250 aa7.49□□□□□ -1.21
PEX28YHR150W VCX1Q99385 411 aa7.49□□□□□ -1.21
PEX28YHR150W MSS18P08593 268 aa7.48□□□□□ -1.21
PEX28YHR150W ABF1P14164 731 aa7.48□□□□□ -1.21
PEX28YHR150W TRX2P22803 104 aaKnown RBP7.48□□□□□ -1.21
PEX28YHR150W PTP2P29461 750 aa7.48□□□□□ -1.21
PEX28YHR150W RAD16P31244 790 aa7.48□□□□□ -1.21
PEX28YHR150W KAR9P32526 644 aa7.48□□□□□ -1.21
PEX28YHR150W TSA1P34760 196 aaKnown RBP7.48□□□□□ -1.21
PEX28YHR150W VRP1P37370 817 aa7.48□□□□□ -1.21
PEX28YHR150W MRP21P38175 177 aa7.48□□□□□ -1.21
PEX28YHR150W CYC2P38909 366 aa7.48□□□□□ -1.21
PEX28YHR150W COA1P40452 197 aa7.48□□□□□ -1.21
PEX28YHR150W RTT101P47050 842 aa7.48□□□□□ -1.21
PEX28YHR150W ASI1P54074 624 aa7.48□□□□□ -1.21
PEX28YHR150W MET14Q02196 202 aa7.48□□□□□ -1.21
PEX28YHR150W FMP30Q02883 468 aa7.48□□□□□ -1.21
PEX28YHR150W TAF12Q03761 539 aa7.48□□□□□ -1.21
PEX28YHR150W YCS4Q06156 1176 aa7.48□□□□□ -1.21
PEX28YHR150W ECM30Q06673 1274 aa7.48□□□□□ -1.21
PEX28YHR150W LOT6Q07923 191 aa7.48□□□□□ -1.21
PEX28YHR150W SLF1Q12034 447 aaKnown RBP7.48□□□□□ -1.21
PEX28YHR150W BCY1P07278 416 aaKnown RBP7.47□□□□□ -1.21
PEX28YHR150W MSS116P15424 664 aaKnown RBP7.47□□□□□ -1.21
PEX28YHR150W PMA2P19657 947 aa7.47□□□□□ -1.21
PEX28YHR150W PDE1P22434 369 aa7.47□□□□□ -1.21
PEX28YHR150W CLB2P24869 491 aa7.47□□□□□ -1.21
PEX28YHR150W YSP3P25036 478 aa7.47□□□□□ -1.21
PEX28YHR150W RPS5P26783 225 aaKnown RBP7.47□□□□□ -1.21
PEX28YHR150W TFB1P32776 642 aa7.47□□□□□ -1.21
PEX28YHR150W SLX5P32828 619 aaKnown RBP7.47□□□□□ -1.21
PEX28YHR150W CSE1P33307 960 aa7.47□□□□□ -1.21
PEX28YHR150W ADD66P36040 267 aa7.47□□□□□ -1.21
PEX28YHR150W POA1P38218 177 aa7.47□□□□□ -1.21
PEX28YHR150W MNN1P39106 762 aa7.47□□□□□ -1.21
PEX28YHR150W FAA2P39518 744 aa7.47□□□□□ -1.21
PEX28YHR150W VHR1P40522 640 aa7.47□□□□□ -1.21
PEX28YHR150W BST1P43571 1029 aa7.47□□□□□ -1.21
PEX28YHR150W RBL2P48606 106 aaKnown RBP7.47□□□□□ -1.21
PEX28YHR150W IMA1P53051 589 aa7.47□□□□□ -1.21
PEX28YHR150W YGR053CP53234 283 aa7.47□□□□□ -1.21
PEX28YHR150W CDC14Q00684 551 aa7.47□□□□□ -1.21
PEX28YHR150W REG1Q00816 1014 aa7.47□□□□□ -1.21
PEX28YHR150W PNG1Q02890 363 aa7.47□□□□□ -1.21
PEX28YHR150W HER2Q03557 464 aa7.47□□□□□ -1.21
PEX28YHR150W YDR131CQ03899 556 aa7.47□□□□□ -1.21
PEX28YHR150W RPN9Q04062 393 aaKnown RBP7.47□□□□□ -1.21
PEX28YHR150W TRE2Q08693 809 aa7.47□□□□□ -1.21
PEX28YHR150W PGC1Q08959 321 aa7.47□□□□□ -1.21
PEX28YHR150W IOC2Q12072 812 aa7.47□□□□□ -1.21
PEX28YHR150W HUA2Q12134 243 aa7.47□□□□□ -1.21
PEX28YHR150W PRT1P06103 763 aaKnown RBP7.47□□□□□ -1.21
PEX28YHR150W SDH2P21801 266 aa7.47□□□□□ -1.21
PEX28YHR150W PGS1P25578 521 aa7.47□□□□□ -1.21
PEX28YHR150W BUB2P26448 306 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms