RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W ATP12P22135 325 aa5.88□□□□□ -1.47
SKN1YGR143W GSY1P23337 708 aa5.88□□□□□ -1.47
SKN1YGR143W GUT2P32191 649 aa5.88□□□□□ -1.47
SKN1YGR143W VAM7P32912 316 aa5.88□□□□□ -1.47
SKN1YGR143W TAF14P35189 244 aa5.88□□□□□ -1.47
SKN1YGR143W UTP30P36144 274 aaKnown RBP5.88□□□□□ -1.47
SKN1YGR143W YBR238CP38330 731 aaKnown RBP5.88□□□□□ -1.47
SKN1YGR143W SUL1P38359 859 aa5.88□□□□□ -1.47
SKN1YGR143W YHR054CP38780 354 aa5.88□□□□□ -1.47
SKN1YGR143W RSC30P38781 883 aa5.88□□□□□ -1.47
SKN1YGR143W YHR219WP38900 624 aa5.88□□□□□ -1.47
SKN1YGR143W SEN34P39707 275 aa5.88□□□□□ -1.47
SKN1YGR143W SLM1P40485 686 aa5.88□□□□□ -1.47
SKN1YGR143W DAK2P43550 591 aa5.88□□□□□ -1.47
SKN1YGR143W COG1P53079 417 aa5.88□□□□□ -1.47
SKN1YGR143W MND1P53102 219 aa5.88□□□□□ -1.47
SKN1YGR143W PEX8P53248 589 aa5.88□□□□□ -1.47
SKN1YGR143W DID2P69771 204 aa5.88□□□□□ -1.47
SKN1YGR143W SKI8Q02793 397 aaPredicted RBP5.88□□□□□ -1.47
SKN1YGR143W SND1Q04007 877 aa5.88□□□□□ -1.47
SKN1YGR143W SWF1Q04629 336 aa5.88□□□□□ -1.47
SKN1YGR143W LUC7Q07508 261 aaPredicted RBP5.88□□□□□ -1.47
SKN1YGR143W SNA4Q07549 140 aa5.88□□□□□ -1.47
SKN1YGR143W DDC1Q08949 612 aa5.88□□□□□ -1.47
SKN1YGR143W AKR2Q12013 749 aa5.88□□□□□ -1.47
SKN1YGR143W PAA1Q12447 191 aaKnown RBP5.88□□□□□ -1.47
SKN1YGR143W DAL1P32375 460 aa5.87□□□□□ -1.47
SKN1YGR143W MEI5P32489 222 aa5.87□□□□□ -1.47
SKN1YGR143W DLD2P46681 530 aaKnown RBP5.87□□□□□ -1.47
SKN1YGR143W FMP33P46998 180 aa5.87□□□□□ -1.47
SKN1YGR143W YJR056CP47115 236 aa5.87□□□□□ -1.47
SKN1YGR143W YDR249CQ03787 373 aa5.87□□□□□ -1.47
SKN1YGR143W DLT1Q04216 342 aa5.87□□□□□ -1.47
SKN1YGR143W HCR1Q05775 265 aaKnown RBP5.87□□□□□ -1.47
SKN1YGR143W RIM20Q12033 661 aa5.87□□□□□ -1.47
SKN1YGR143W DCN1Q12395 269 aa5.87□□□□□ -1.47
SKN1YGR143W RPL25P04456 142 aaKnown RBP5.87□□□□□ -1.47
SKN1YGR143W LEU4P06208 619 aaKnown RBP5.87□□□□□ -1.47
SKN1YGR143W CHS1P08004 1131 aa5.87□□□□□ -1.47
SKN1YGR143W HSF1P10961 833 aa5.87□□□□□ -1.47
SKN1YGR143W GIT1P25346 518 aa5.87□□□□□ -1.47
SKN1YGR143W GBP2P25555 427 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SKN1YGR143W SRP101P32916 621 aa5.87□□□□□ -1.47
SKN1YGR143W RPT5P33297 434 aaKnown RBP5.87□□□□□ -1.47
SKN1YGR143W IXR1P33417 597 aa5.87□□□□□ -1.47
SKN1YGR143W TIF11P38912 153 aaKnown RBP5.87□□□□□ -1.47
SKN1YGR143W TDA10P42938 290 aa5.87□□□□□ -1.47
SKN1YGR143W GTO1P48239 356 aa5.87□□□□□ -1.47
SKN1YGR143W DIE2P50076 525 aa5.87□□□□□ -1.47
SKN1YGR143W FMP48P53233 369 aa5.87□□□□□ -1.47
SKN1YGR143W LGE1Q02796 332 aaKnown RBP5.87□□□□□ -1.47
SKN1YGR143W EAR1Q03212 550 aa5.87□□□□□ -1.47
SKN1YGR143W RQC1Q05468 723 aaKnown RBP5.87□□□□□ -1.47
SKN1YGR143W DIA2Q08496 732 aaPredicted RBP5.87□□□□□ -1.47
SKN1YGR143W ESA1Q08649 445 aa5.87□□□□□ -1.47
SKN1YGR143W GLO4Q12320 285 aa5.87□□□□□ -1.47
SKN1YGR143W MDM20Q12387 796 aaKnown RBP5.87□□□□□ -1.47
SKN1YGR143W YEL077CQ3E7X8 1277 aa5.87□□□□□ -1.47
SKN1YGR143W PCK1P10963 549 aa5.86□□□□□ -1.47
SKN1YGR143W RPL8AP17076 256 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W COX11P19516 300 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W PRE8P23639 250 aa5.86□□□□□ -1.47
SKN1YGR143W RPS5P26783 225 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W RPL8BP29453 256 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W FUN30P31380 1131 aa5.86□□□□□ -1.47
SKN1YGR143W SUI1P32911 108 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W SCO2P38072 301 aa5.86□□□□□ -1.47
SKN1YGR143W POL12P38121 705 aaPredicted RBP5.86□□□□□ -1.47
SKN1YGR143W CST26P38226 397 aa5.86□□□□□ -1.47
SKN1YGR143W QNS1P38795 714 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W CCT2P39076 527 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W UBP9P39967 754 aa5.86□□□□□ -1.47
SKN1YGR143W YER010CP40011 234 aa5.86□□□□□ -1.47
SKN1YGR143W YAT2P40017 923 aa5.86□□□□□ -1.47
SKN1YGR143W DUG1P43616 481 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W RPS7BP48164 190 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W YGR012WP53206 393 aa5.86□□□□□ -1.47
SKN1YGR143W TWF1P53250 332 aa5.86□□□□□ -1.47
SKN1YGR143W YGR127WP53275 312 aa5.86□□□□□ -1.47
SKN1YGR143W CBK1P53894 756 aa5.86□□□□□ -1.47
SKN1YGR143W SPC19Q03954 165 aa5.86□□□□□ -1.47
SKN1YGR143W TIF35Q04067 274 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W HBT1Q07653 1046 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W YEH1Q07804 573 aa5.86□□□□□ -1.47
SKN1YGR143W FRE5Q08908 694 aa5.86□□□□□ -1.47
SKN1YGR143W VPS13Q07878 3144 aa5.86□□□□□ -1.47
SKN1YGR143W ARG80P07249 177 aa5.86□□□□□ -1.47
SKN1YGR143W MTF2P10849 440 aa5.86□□□□□ -1.47
SKN1YGR143W SRM1P21827 482 aa5.86□□□□□ -1.47
SKN1YGR143W CNB1P25296 175 aa5.86□□□□□ -1.47
SKN1YGR143W PRO3P32263 286 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W CDC13P32797 924 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W PHO11P35842 467 aa5.86□□□□□ -1.47
SKN1YGR143W SSH1P38353 490 aaKnown RBP5.86□□□□□ -1.47
SKN1YGR143W PHO12P38693 467 aa5.86□□□□□ -1.47
SKN1YGR143W ALG5P40350 334 aa5.86□□□□□ -1.47
SKN1YGR143W ALG8P40351 577 aa5.86□□□□□ -1.47
SKN1YGR143W CSM2P40465 213 aa5.86□□□□□ -1.47
SKN1YGR143W ICE2P40499 491 aa5.86□□□□□ -1.47
SKN1YGR143W MND2P40577 368 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms