RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W YGL138CP53122 345 aa2.36□□□□□ -2.03
CBF2YGR140W YGR127WP53275 312 aa2.36□□□□□ -2.03
CBF2YGR140W DCP2P53550 970 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W IPI3P53877 555 aa2.36□□□□□ -2.03
CBF2YGR140W PPM1Q04081 328 aa2.36□□□□□ -2.03
CBF2YGR140W RRP45Q05636 305 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W YSH1Q06224 779 aaPredicted RBP2.36□□□□□ -2.03
CBF2YGR140W SWA2Q06677 668 aa2.36□□□□□ -2.03
CBF2YGR140W HBT1Q07653 1046 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W RTC5Q12108 567 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W TFB5Q3E7C1 72 aaPredicted RBP2.36□□□□□ -2.03
CBF2YGR140W YIL002W-AQ3E7Z5 69 aa2.36□□□□□ -2.03
CBF2YGR140W YMR084WA2P2R3 262 aa2.36□□□□□ -2.03
CBF2YGR140W SPE2P21182 396 aa2.36□□□□□ -2.03
CBF2YGR140W ADH7P25377 361 aa2.36□□□□□ -2.03
CBF2YGR140W RFA2P26754 273 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W GSH1P32477 678 aa2.36□□□□□ -2.03
CBF2YGR140W SOF1P33750 489 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W TCD2P36101 447 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W RPF2P36160 344 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W MCX1P38323 520 aaPredicted RBP2.36□□□□□ -2.03
CBF2YGR140W SGN1P40561 250 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
CBF2YGR140W PTR3P43606 678 aa2.36□□□□□ -2.03
CBF2YGR140W MPS3P47069 682 aa2.36□□□□□ -2.03
CBF2YGR140W IMD4P50094 524 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W NCS6P53088 359 aa2.36□□□□□ -2.03
CBF2YGR140W YGL036WP53185 909 aaPredicted RBP2.36□□□□□ -2.03
CBF2YGR140W YAP6Q03935 383 aa2.36□□□□□ -2.03
CBF2YGR140W MGR3Q04472 501 aa2.36□□□□□ -2.03
CBF2YGR140W HPF1Q05164 967 aa2.36□□□□□ -2.03
CBF2YGR140W TDA6Q06466 467 aa2.36□□□□□ -2.03
CBF2YGR140W NOP12Q08208 459 aaKnown RBP2.36□□□□□ -2.03
CBF2YGR140W TGS1Q12052 315 aa2.36□□□□□ -2.03
CBF2YGR140W CAF20P12962 161 aaKnown RBP2.35□□□□□ -2.03
CBF2YGR140W YME2P32843 850 aa2.35□□□□□ -2.03
CBF2YGR140W SDH8P38345 138 aa2.35□□□□□ -2.03
CBF2YGR140W YNG2P38806 282 aaKnown RBP2.35□□□□□ -2.03
CBF2YGR140W FMO1P38866 432 aa2.35□□□□□ -2.03
CBF2YGR140W SPT8P38915 602 aa2.35□□□□□ -2.03
CBF2YGR140W FAR3P46671 204 aa2.35□□□□□ -2.03
CBF2YGR140W CUE3P53137 624 aaKnown RBP2.35□□□□□ -2.03
CBF2YGR140W YGR130CP53278 816 aa2.35□□□□□ -2.03
CBF2YGR140W YNR068CP53754 272 aa2.35□□□□□ -2.03
CBF2YGR140W YMR187CQ03236 431 aa2.35□□□□□ -2.03
CBF2YGR140W USA1Q03714 838 aa2.35□□□□□ -2.03
CBF2YGR140W ARX1Q03862 593 aaKnown RBP2.35□□□□□ -2.03
CBF2YGR140W DLT1Q04216 342 aa2.35□□□□□ -2.03
CBF2YGR140W CRT10Q08226 957 aa2.35□□□□□ -2.03
CBF2YGR140W THI72Q08579 599 aa2.35□□□□□ -2.03
CBF2YGR140W HMI1Q12039 706 aa2.35□□□□□ -2.03
CBF2YGR140W CYC7P00045 113 aa2.35□□□□□ -2.03
CBF2YGR140W GCD1P09032 578 aaPredicted RBP2.35□□□□□ -2.03
CBF2YGR140W PRE10P21242 288 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
CBF2YGR140W SLM4P38247 162 aa2.35□□□□□ -2.03
CBF2YGR140W MMS4P38257 691 aa2.35□□□□□ -2.03
CBF2YGR140W ICS2P38284 255 aa2.35□□□□□ -2.03
CBF2YGR140W BUD16P39988 312 aa2.35□□□□□ -2.03
CBF2YGR140W MRX1P40050 688 aa2.35□□□□□ -2.03
CBF2YGR140W URB2P47108 1174 aa2.35□□□□□ -2.03
CBF2YGR140W IST1P53843 298 aaPredicted RBP2.35□□□□□ -2.03
CBF2YGR140W PDS5Q04264 1277 aa2.35□□□□□ -2.03
CBF2YGR140W ACK1Q07622 623 aaPredicted RBP2.35□□□□□ -2.03
CBF2YGR140W MED2Q12124 431 aa2.35□□□□□ -2.03
CBF2YGR140W LPX1Q12405 387 aaKnown RBP2.35□□□□□ -2.03
CBF2YGR140W SPE4Q12455 300 aa2.35□□□□□ -2.03
CBF2YGR140W SAC3P46674 1301 aa2.35□□□□□ -2.03
CBF2YGR140W FUB1P25659 250 aa2.35□□□□□ -2.03
CBF2YGR140W NIP1P32497 812 aaKnown RBP2.35□□□□□ -2.03
CBF2YGR140W IME2P32581 645 aa2.35□□□□□ -2.03
CBF2YGR140W VPS17P32913 551 aa2.35□□□□□ -2.03
CBF2YGR140W EBP2P36049 427 aaKnown RBP2.35□□□□□ -2.03
CBF2YGR140W TUL1P36096 758 aa2.35□□□□□ -2.03
CBF2YGR140W HEL1P36113 551 aa2.35□□□□□ -2.03
CBF2YGR140W MRPL7P36519 292 aa2.35□□□□□ -2.03
CBF2YGR140W YJL107CP42947 387 aa2.35□□□□□ -2.03
CBF2YGR140W YGR149WP48236 432 aa2.35□□□□□ -2.03
CBF2YGR140W FMS1P50264 508 aa2.35□□□□□ -2.03
CBF2YGR140W MUP1P50276 574 aa2.35□□□□□ -2.03
CBF2YGR140W SPT20P50875 604 aa2.35□□□□□ -2.03
CBF2YGR140W SNF12P53628 566 aa2.35□□□□□ -2.03
CBF2YGR140W PDR16P53860 351 aaKnown RBP2.35□□□□□ -2.03
CBF2YGR140W NSG2P53898 299 aa2.35□□□□□ -2.03
CBF2YGR140W DAK1P54838 584 aaKnown RBP2.35□□□□□ -2.03
CBF2YGR140W RPA49Q01080 415 aaPredicted RBP2.35□□□□□ -2.03
CBF2YGR140W FIN1Q03898 291 aa2.35□□□□□ -2.03
CBF2YGR140W YDR109CQ04585 715 aa2.35□□□□□ -2.03
CBF2YGR140W MRPL1Q04599 285 aa2.35□□□□□ -2.03
CBF2YGR140W DBP9Q06218 594 aaKnown RBP2.35□□□□□ -2.03
CBF2YGR140W ARR3Q06598 404 aa2.35□□□□□ -2.03
CBF2YGR140W YDL086WQ07505 273 aa2.35□□□□□ -2.03
CBF2YGR140W FRE3Q08905 711 aa2.35□□□□□ -2.03
CBF2YGR140W BMS1Q08965 1183 aaKnown RBP2.35□□□□□ -2.03
CBF2YGR140W BAG7Q12128 409 aa2.35□□□□□ -2.03
CBF2YGR140W RLM1Q12224 676 aa2.35□□□□□ -2.03
CBF2YGR140W NBL1Q3E7Y6 73 aa2.35□□□□□ -2.03
CBF2YGR140W HIP1P06775 603 aa2.34□□□□□ -2.03
CBF2YGR140W YML003WP0CF16 290 aa2.34□□□□□ -2.03
CBF2YGR140W URA4P20051 364 aa2.34□□□□□ -2.03
CBF2YGR140W PPH22P23595 377 aa2.34□□□□□ -2.03
CBF2YGR140W MRE11P32829 692 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms