RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C SLD3P53135 668 aa1.56□□□□□ -2.16
SPG3YDR504C TAM41P53230 385 aa1.56□□□□□ -2.16
SPG3YDR504C YOR387CQ08910 206 aa1.56□□□□□ -2.16
SPG3YDR504C RAP1P11938 827 aa1.55□□□□□ -2.16
SPG3YDR504C NAM9P27929 486 aa1.55□□□□□ -2.16
SPG3YDR504C YIM1P28625 365 aa1.55□□□□□ -2.16
SPG3YDR504C RRP14P36080 434 aaKnown RBP1.55□□□□□ -2.16
SPG3YDR504C DJP1P40564 432 aa1.55□□□□□ -2.16
SPG3YDR504C IMA5P40884 581 aa1.55□□□□□ -2.16
SPG3YDR504C PMR1P13586 950 aa1.54□□□□□ -2.16
SPG3YDR504C ISY1P21374 235 aaPredicted RBP1.54□□□□□ -2.16
SPG3YDR504C MCM4P30665 933 aaKnown RBP1.54□□□□□ -2.16
SPG3YDR504C PHO90P39535 881 aa1.54□□□□□ -2.16
SPG3YDR504C YGR237CP50089 785 aa1.54□□□□□ -2.16
SPG3YDR504C BTN2P53286 410 aa1.54□□□□□ -2.16
SPG3YDR504C MSS11Q03825 758 aa1.54□□□□□ -2.16
SPG3YDR504C ADH4P10127 382 aa1.53□□□□□ -2.16
SPG3YDR504C HEM12P32347 362 aaPredicted RBP1.53□□□□□ -2.16
SPG3YDR504C PTR2P32901 601 aa1.53□□□□□ -2.16
SPG3YDR504C SWD3P38123 315 aa1.53□□□□□ -2.16
SPG3YDR504C YLF2P38746 405 aa1.53□□□□□ -2.16
SPG3YDR504C YPL108WQ02872 168 aaPredicted RBP1.53□□□□□ -2.16
SPG3YDR504C SWA2Q06677 668 aa1.53□□□□□ -2.16
SPG3YDR504C YER078W-AQ3E7A2 54 aa1.53□□□□□ -2.16
SPG3YDR504C KRS1P15180 591 aaKnown RBP1.52□□□□□ -2.17
SPG3YDR504C PHO3P24031 467 aa1.52□□□□□ -2.17
SPG3YDR504C YME1P32795 747 aa1.52□□□□□ -2.17
SPG3YDR504C WSC2P53832 503 aa1.52□□□□□ -2.17
SPG3YDR504C PEX15Q08215 383 aa1.52□□□□□ -2.17
SPG3YDR504C RRP12Q12754 1228 aaKnown RBP1.52□□□□□ -2.17
SPG3YDR504C YML003WP0CF16 290 aa1.51□□□□□ -2.17
SPG3YDR504C RPL20AP0CX23 172 aaKnown RBP1.51□□□□□ -2.17
SPG3YDR504C RPL20BP0CX24 172 aaPredicted RBP1.51□□□□□ -2.17
SPG3YDR504C SRP54P20424 541 aaKnown RBP1.51□□□□□ -2.17
SPG3YDR504C TAF5P38129 798 aa1.51□□□□□ -2.17
SPG3YDR504C CTK2P46962 323 aa1.51□□□□□ -2.17
SPG3YDR504C CDC45Q08032 650 aa1.51□□□□□ -2.17
SPG3YDR504C HNT3Q08702 217 aa1.51□□□□□ -2.17
SPG3YDR504C HRT3Q12347 344 aa1.51□□□□□ -2.17
SPG3YDR504C DEG1P31115 442 aaKnown RBP1.5□□□□□ -2.17
SPG3YDR504C SIP2P34164 415 aaKnown RBP1.5□□□□□ -2.17
SPG3YDR504C AXL1P40851 1208 aa1.5□□□□□ -2.17
SPG3YDR504C PUS4P48567 403 aaKnown RBP1.5□□□□□ -2.17
SPG3YDR504C NUR1Q12066 484 aa1.5□□□□□ -2.17
SPG3YDR504C CLN3P13365 580 aa1.49□□□□□ -2.17
SPG3YDR504C SPT15P13393 240 aaKnown RBP1.49□□□□□ -2.17
SPG3YDR504C RER1P25560 188 aa1.49□□□□□ -2.17
SPG3YDR504C SWD1P39706 426 aa1.49□□□□□ -2.17
SPG3YDR504C DCP2P53550 970 aaKnown RBP1.49□□□□□ -2.17
SPG3YDR504C MTG1Q03151 367 aaPredicted RBP1.49□□□□□ -2.17
SPG3YDR504C YMR087WQ04299 284 aa1.49□□□□□ -2.17
SPG3YDR504C RRG7Q08774 242 aaPredicted RBP1.49□□□□□ -2.17
SPG3YDR504C TMS1Q12116 473 aa1.49□□□□□ -2.17
SPG3YDR504C PDH1Q12428 516 aaKnown RBP1.49□□□□□ -2.17
SPG3YDR504C FRD1P32614 470 aaKnown RBP1.48□□□□□ -2.17
SPG3YDR504C LHS1P36016 881 aa1.48□□□□□ -2.17
SPG3YDR504C MOT3P54785 490 aaKnown RBP1.48□□□□□ -2.17
SPG3YDR504C RBD2Q12270 262 aa1.48□□□□□ -2.17
SPG3YDR504C SUL2Q12325 893 aa1.48□□□□□ -2.17
SPG3YDR504C ARP6Q12509 438 aa1.48□□□□□ -2.17
SPG3YDR504C MRC1P25588 1096 aa1.47□□□□□ -2.17
SPG3YDR504C GAC1P28006 793 aa1.47□□□□□ -2.17
SPG3YDR504C NDT80P38830 627 aa1.47□□□□□ -2.17
SPG3YDR504C YGR210CP42942 411 aa1.47□□□□□ -2.17
SPG3YDR504C SOL4P53315 255 aa1.47□□□□□ -2.17
SPG3YDR504C ATG23Q06671 453 aa1.47□□□□□ -2.17
SPG3YDR504C RDR1Q08904 546 aa1.47□□□□□ -2.17
SPG3YDR504C SLX4Q12098 748 aa1.47□□□□□ -2.17
SPG3YDR504C TYR1P20049 452 aa1.46□□□□□ -2.18
SPG3YDR504C LRE1P25579 583 aaKnown RBP1.46□□□□□ -2.18
SPG3YDR504C SAC6P32599 642 aaKnown RBP1.46□□□□□ -2.18
SPG3YDR504C TUL1P36096 758 aa1.46□□□□□ -2.18
SPG3YDR504C UTH1P36135 365 aa1.46□□□□□ -2.18
SPG3YDR504C ARP1P38696 384 aa1.46□□□□□ -2.18
SPG3YDR504C MRX1P40050 688 aa1.46□□□□□ -2.18
SPG3YDR504C YTA12P40341 825 aa1.46□□□□□ -2.18
SPG3YDR504C MSO1P53604 210 aaKnown RBP1.46□□□□□ -2.18
SPG3YDR504C UTP14Q04500 899 aaKnown RBP1.46□□□□□ -2.18
SPG3YDR504C SEC62P21825 274 aa1.45□□□□□ -2.18
SPG3YDR504C FUN19P28003 413 aaPredicted RBP1.45□□□□□ -2.18
SPG3YDR504C CAB2P40506 365 aa1.45□□□□□ -2.18
SPG3YDR504C BI3Q9ZZW7 517 aa1.45□□□□□ -2.18
SPG3YDR504C MCM3P24279 971 aaKnown RBP1.44□□□□□ -2.18
SPG3YDR504C YBL059WP34224 193 aa1.44□□□□□ -2.18
SPG3YDR504C ECM15P35195 104 aa1.44□□□□□ -2.18
SPG3YDR504C SDS22P36047 338 aa1.44□□□□□ -2.18
SPG3YDR504C PMU1P36069 295 aa1.44□□□□□ -2.18
SPG3YDR504C NMD2P38798 1089 aaKnown RBP1.44□□□□□ -2.18
SPG3YDR504C YFR020WP43600 232 aa1.44□□□□□ -2.18
SPG3YDR504C YJR142WP47173 342 aa1.44□□□□□ -2.18
SPG3YDR504C YGL082WP53155 381 aa1.44□□□□□ -2.18
SPG3YDR504C SAM50P53969 484 aa1.44□□□□□ -2.18
SPG3YDR504C PET122P10355 254 aa1.43□□□□□ -2.18
SPG3YDR504C YCR022CP25620 114 aa1.43□□□□□ -2.18
SPG3YDR504C SOF1P33750 489 aaKnown RBP1.43□□□□□ -2.18
SPG3YDR504C PAD1P33751 242 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
SPG3YDR504C MIA40P36046 403 aa1.43□□□□□ -2.18
SPG3YDR504C MRP21P38175 177 aa1.43□□□□□ -2.18
SPG3YDR504C SAW1P39735 261 aa1.43□□□□□ -2.18
SPG3YDR504C ECM10P39987 644 aa1.43□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms