RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	YAK1	P14680	807 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	SAM35	P14693	329 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	POL3	P15436	1097 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	SNF5	P18480	905 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	VPS34	P22543	875 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	DBP2	P24783	546 aa	Known RBP	4.61	□□□□□ -1.67
TFB3	YDR460W	SEC65	P29478	273 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	ITR1	P30605	584 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	EUG1	P32474	517 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	MDL2	P33311	773 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	SER1	P33330	395 aa	Known RBP	4.61	□□□□□ -1.67
TFB3	YDR460W	RPC25	P35718	212 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	HES1	P35843	434 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	RRN3	P36070	627 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	BAP2	P38084	609 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	DUG2	P38149	878 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	YBR062C	P38239	180 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	RTC3	P38804	111 aa	Predicted RBP	4.61	□□□□□ -1.67
TFB3	YDR460W	VMA7	P39111	118 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	AIM2	P39721	246 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	FRT2	P39734	528 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	MXR1	P40029	184 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	DSE1	P40077	573 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	YRB2	P40517	327 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	OYE3	P41816	400 aa	Predicted RBP	4.61	□□□□□ -1.67
TFB3	YDR460W	PFD1	P46988	109 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	YPT32	P51996	222 aa	Known RBP	4.61	□□□□□ -1.67
TFB3	YDR460W	ARO8	P53090	500 aa	Known RBP	4.61	□□□□□ -1.67
TFB3	YDR460W	NMA2	P53204	395 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	YNL193W	P53870	558 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	YNL058C	P53947	316 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	MDM1	Q01846	1127 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	FDC1	Q03034	503 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	RPN4	Q03465	531 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	BNA7	Q04066	261 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	GPI17	Q04080	534 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	URH1	Q04179	340 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	YMR114C	Q04471	368 aa	Known RBP	4.61	□□□□□ -1.67
TFB3	YDR460W	GAL83	Q04739	417 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	SOV1	Q04748	898 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	PEX10	Q05568	337 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	GLO2	Q05584	274 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	PHM6	Q05637	104 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	BCP1	Q06338	283 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	ISA1	Q07821	250 aa	Predicted RBP	4.61	□□□□□ -1.67
TFB3	YDR460W	RCL1	Q08096	367 aa	Predicted RBP	4.61	□□□□□ -1.67
TFB3	YDR460W	FMP40	Q08968	688 aa	Predicted RBP	4.61	□□□□□ -1.67
TFB3	YDR460W	FEX2	Q08991	375 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	ADR1	P07248	1323 aa		4.61	□□□□□ -1.67
TFB3	YDR460W	GSC2	P40989	1895 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	SEM1	O94742	89 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	CBP2	P03874	630 aa	Predicted RBP	4.6	□□□□□ -1.67
TFB3	YDR460W	PYC1	P11154	1178 aa	Known RBP	4.6	□□□□□ -1.67
TFB3	YDR460W	EXO70	P19658	623 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	ACE2	P21192	770 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	RPA135	P22138	1203 aa	Known RBP	4.6	□□□□□ -1.67
TFB3	YDR460W	SRO9	P25567	434 aa	Known RBP	4.6	□□□□□ -1.67
TFB3	YDR460W	PMT2	P31382	759 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	FRD1	P32614	470 aa	Known RBP	4.6	□□□□□ -1.67
TFB3	YDR460W	CLG1	P35190	452 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	ATG19	P35193	415 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	CAF4	P36130	643 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	YPK3	P38070	525 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	RFC3	P38629	340 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	IMD2	P38697	523 aa	Known RBP	4.6	□□□□□ -1.67
TFB3	YDR460W	NPT1	P39683	429 aa	Known RBP	4.6	□□□□□ -1.67
TFB3	YDR460W	DDI1	P40087	428 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	FAR7	P43592	221 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	BNA3	P47039	444 aa	Known RBP	4.6	□□□□□ -1.67
TFB3	YDR460W	MNT2	P53059	558 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	DSD1	P53095	428 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	SOL4	P53315	255 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	PET117	Q02771	107 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	GCN5	Q03330	439 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	FMN1	Q03778	218 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	RBS1	Q05672	457 aa	Known RBP	4.6	□□□□□ -1.67
TFB3	YDR460W	ARV1	Q06541	321 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	LOT6	Q07923	191 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	RPN8	Q08723	338 aa	Known RBP	4.6	□□□□□ -1.67
TFB3	YDR460W	FRE5	Q08908	694 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	TRE1	Q08919	783 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	ACM1	Q08981	209 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	YDL109C	Q12103	647 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	HRT3	Q12347	344 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	YHR213W-A	Q8TGT4	77 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	APM4	Q99186	491 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	HKR1	P41809	1802 aa		4.6	□□□□□ -1.67
TFB3	YDR460W	MPH2	P0CD99	609 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	MRP13	P12686	339 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	KIN2	P13186	1147 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	SPO16	P17122	198 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	PRP9	P19736	530 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	SGV1	P23293	657 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	HXT2	P23585	541 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	CAD1	P24813	409 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	CAM1	P29547	415 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	TFC1	P32367	649 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	HXT3	P32466	567 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	DOA4	P32571	926 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	ABZ1	P37254	787 aa	Predicted RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms