RNA–Protein interactions for RNA: YDR447C

RPS17B, Transcript of Ribosomal protein 51 (rp51) of the small (40s) subunit, yeast

Gene RPS17B, Length 411 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS17B	YDR447C	LHS1	P36016	881 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	REG2	P38232	338 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	YEL020C	P39994	560 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	MRX1	P40050	688 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	ASG1	P40467	964 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	MET18	P40469	1032 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	MET28	P40573	187 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	AXL1	P40851	1208 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	RPN11	P43588	306 aa	Known RBP	2.69	□□□□□ -1.98
RPS17B	YDR447C	YFR020W	P43600	232 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	YJL043W	P47053	257 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	STR3	P53101	465 aa	Known RBP	2.69	□□□□□ -1.98
RPS17B	YDR447C	RSC1	P53236	928 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	JJJ1	P53863	590 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	IRC10	Q08118	586 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	ATG9	Q12142	997 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	SNU66	Q12420	587 aa	Predicted RBP	2.69	□□□□□ -1.98
RPS17B	YDR447C	YOL159C-A	Q3E769	90 aa		2.69	□□□□□ -1.98
RPS17B	YDR447C	ADE5,7	P07244	802 aa	Known RBP	2.68	□□□□□ -1.98
RPS17B	YDR447C	CHO1	P08456	276 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	HEM1	P09950	548 aa	Predicted RBP	2.68	□□□□□ -1.98
RPS17B	YDR447C	PDX1	P16451	410 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	KGD1	P20967	1014 aa	Known RBP	2.68	□□□□□ -1.98
RPS17B	YDR447C	MAK32	P23060	363 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	VMA16	P23968	213 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	VMA8	P32610	256 aa	Known RBP	2.68	□□□□□ -1.98
RPS17B	YDR447C	RPC34	P32910	317 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	SNU114	P36048	1008 aa	Known RBP	2.68	□□□□□ -1.98
RPS17B	YDR447C	AGP2	P38090	596 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	IMD2	P38697	523 aa	Known RBP	2.68	□□□□□ -1.98
RPS17B	YDR447C	DIA4	P38705	446 aa	Predicted RBP	2.68	□□□□□ -1.98
RPS17B	YDR447C	ERV46	P39727	415 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	DOT5	P40553	215 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	CDC1	P40986	491 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	MAF1	P41910	395 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	DPB11	P47027	764 aa	Predicted RBP	2.68	□□□□□ -1.98
RPS17B	YDR447C	IMD3	P50095	523 aa	Known RBP	2.68	□□□□□ -1.98
RPS17B	YDR447C	MRK1	P50873	501 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	MAK10	Q02197	733 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	BUD22	Q04347	519 aa	Known RBP	2.68	□□□□□ -1.98
RPS17B	YDR447C	LUC7	Q07508	261 aa	Predicted RBP	2.68	□□□□□ -1.98
RPS17B	YDR447C	INP53	Q12271	1107 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	PNS1	Q12412	539 aa		2.68	□□□□□ -1.98
RPS17B	YDR447C	RPN13	O13563	156 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	HXK2	P04807	486 aa	Known RBP	2.67	□□□□□ -1.98
RPS17B	YDR447C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
RPS17B	YDR447C	EST1	P17214	699 aa	Predicted RBP	2.67	□□□□□ -1.98
RPS17B	YDR447C	GSY2	P27472	705 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	GPI10	P30777	616 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	SYN8	P31377	255 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	TIF3	P34167	436 aa	Known RBP	2.67	□□□□□ -1.98
RPS17B	YDR447C	SMF1	P38925	575 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	AFG3	P39925	761 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	PAC2	P39937	518 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	LTP1	P40347	161 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	PKP1	P40530	394 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	ROK1	P45818	564 aa	Predicted RBP	2.67	□□□□□ -1.98
RPS17B	YDR447C	IRC8	P47046	822 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	DIA3	P52290	468 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	YGR066C	P53242	292 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	IST1	P53843	298 aa	Predicted RBP	2.67	□□□□□ -1.98
RPS17B	YDR447C	EFM6	P53970	246 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	YDR131C	Q03899	556 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	VPS38	Q05919	439 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	ARO10	Q06408	635 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	THI3	Q07471	609 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	RTT109	Q07794	436 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	YOR389W	Q08912	624 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	SFI1	Q12369	946 aa		2.67	□□□□□ -1.98
RPS17B	YDR447C	YER145C-A	A0A023PYF4	145 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	MF(ALPHA)1	P01149	165 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	GAL80	P04387	435 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	MRP13	P12686	339 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	ADH7	P25377	361 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	SSE2	P32590	693 aa	Known RBP	2.66	□□□□□ -1.98
RPS17B	YDR447C	SAS3	P34218	831 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	YKL050C	P35736	922 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	UBP11	P36026	717 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	TCD2	P36101	447 aa	Known RBP	2.66	□□□□□ -1.98
RPS17B	YDR447C	FTH1	P38310	465 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	ELO1	P39540	310 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	UIP3	P39547	235 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	YIL166C	P40445	542 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	CIN1	P40987	1014 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	ZDS2	P54786	942 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	APM1	Q00776	475 aa	Predicted RBP	2.66	□□□□□ -1.98
RPS17B	YDR447C	ECM22	Q05958	814 aa	Predicted RBP	2.66	□□□□□ -1.98
RPS17B	YDR447C	MRD1	Q06106	887 aa	Known RBP	2.66	□□□□□ -1.98
RPS17B	YDR447C	GRC3	Q07845	632 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	FMP40	Q08968	688 aa	Predicted RBP	2.66	□□□□□ -1.98
RPS17B	YDR447C	RIM20	Q12033	661 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	RDL1	Q12305	139 aa	Known RBP	2.66	□□□□□ -1.98
RPS17B	YDR447C	SGS1	P35187	1447 aa		2.66	□□□□□ -1.98
RPS17B	YDR447C	MRP2	P10663	115 aa	Predicted RBP	2.65	□□□□□ -1.99
RPS17B	YDR447C	KRS1	P15180	591 aa	Known RBP	2.65	□□□□□ -1.99
RPS17B	YDR447C	SPO11	P23179	398 aa		2.65	□□□□□ -1.99
RPS17B	YDR447C	PUP3	P25451	205 aa	Known RBP	2.65	□□□□□ -1.99
RPS17B	YDR447C	ADY2	P25613	283 aa		2.65	□□□□□ -1.99
RPS17B	YDR447C	WBP1	P33767	430 aa	Known RBP	2.65	□□□□□ -1.99
RPS17B	YDR447C	YBR144C	P34215	104 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 81.3 ms