RNA–Protein interactions for RNA: YDR422C

SIP1, Transcript of Alternate beta-subunit of the Snf1p kinase complex, yeast

Gene SIP1, Length 2,448 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP1	YDR422C	CUE3	P53137	624 aa	Known RBP	4.1	□□□□□ -1.75
SIP1	YDR422C	ERG5	P54781	538 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	COX3	P00420	269 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	MRP13	P12686	339 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	DMC1	P25453	334 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	CMC1	P36064	111 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	YHL012W	P38709	493 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	NUP60	P39705	539 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	OYE3	P41816	400 aa	Predicted RBP	4.1	□□□□□ -1.75
SIP1	YDR422C	BPL1	P48445	690 aa	Predicted RBP	4.1	□□□□□ -1.75
SIP1	YDR422C	YGR111W	P53265	400 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	HOF1	Q05080	669 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	MCM21	Q06675	368 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	TCO89	Q08921	799 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	NBP2	Q12163	236 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	POM34	Q12445	299 aa		4.1	□□□□□ -1.75
SIP1	YDR422C	SPE1	P08432	466 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	PRB1	P09232	635 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	EST1	P17214	699 aa	Predicted RBP	4.09	□□□□□ -1.75
SIP1	YDR422C	PRD1	P25375	712 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	GLY1	P37303	387 aa	Known RBP	4.09	□□□□□ -1.75
SIP1	YDR422C	REG2	P38232	338 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	RRM3	P38766	723 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	TOM22	P49334	152 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	IMD4	P50094	524 aa	Known RBP	4.09	□□□□□ -1.75
SIP1	YDR422C	NCS6	P53088	359 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	PUS2	P53167	370 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	MTL1	P53214	551 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	YNL092W	P53934	400 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	ADA2	Q02336	434 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	KAP120	Q02932	1032 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	MSC1	Q03104	513 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	VPS38	Q05919	439 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	ATG9	Q12142	997 aa		4.09	□□□□□ -1.75
SIP1	YDR422C	JIP3	O13555	125 aa		4.09	□□□□□ -1.76
SIP1	YDR422C	KRS1	P15180	591 aa	Known RBP	4.09	□□□□□ -1.76
SIP1	YDR422C	LRE1	P25579	583 aa	Known RBP	4.09	□□□□□ -1.76
SIP1	YDR422C	RFA2	P26754	273 aa	Known RBP	4.09	□□□□□ -1.76
SIP1	YDR422C	SRB5	P32585	307 aa		4.09	□□□□□ -1.76
SIP1	YDR422C	DED81	P38707	554 aa	Known RBP	4.09	□□□□□ -1.76
SIP1	YDR422C	ERC1	P38767	581 aa		4.09	□□□□□ -1.76
SIP1	YDR422C	ASE1	P50275	885 aa		4.09	□□□□□ -1.76
SIP1	YDR422C	OGG1	P53397	376 aa	Predicted RBP	4.09	□□□□□ -1.76
SIP1	YDR422C	MNT4	P53745	580 aa		4.09	□□□□□ -1.76
SIP1	YDR422C	ACL4	Q03771	387 aa		4.09	□□□□□ -1.76
SIP1	YDR422C	COQ4	O13525	335 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	YLR415C	O13578	112 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	RPS9B	P05755	195 aa	Known RBP	4.08	□□□□□ -1.76
SIP1	YDR422C	YML002W	P0CF17	737 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	PRP6	P19735	899 aa	Predicted RBP	4.08	□□□□□ -1.76
SIP1	YDR422C	YME2	P32843	850 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	TPO5	P36029	618 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	ALG14	P38242	237 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	LIN1	P38852	340 aa	Predicted RBP	4.08	□□□□□ -1.76
SIP1	YDR422C	YER034W	P40022	185 aa	Known RBP	4.08	□□□□□ -1.76
SIP1	YDR422C	INA22	P40576	216 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	MND2	P40577	368 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	IAH1	P41734	238 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	RFX1	P48743	811 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	INP52	P50942	1183 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	DSE4	P53753	1117 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	RPS15	Q01855	142 aa	Known RBP	4.08	□□□□□ -1.76
SIP1	YDR422C	PLB2	Q03674	706 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	ARG7	Q04728	441 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	YFT2	Q06676	274 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	TRE1	Q08919	783 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	ULA1	Q12059	462 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	BMT6	Q12291	365 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	YOR012W	Q12351	137 aa		4.08	□□□□□ -1.76
SIP1	YDR422C	UNG1	P12887	359 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	UBA1	P22515	1024 aa	Known RBP	4.07	□□□□□ -1.76
SIP1	YDR422C	YUH1	P35127	236 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SIP1	YDR422C	SEC31	P38968	1273 aa	Known RBP	4.07	□□□□□ -1.76
SIP1	YDR422C	TWF1	P53250	332 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	LAS17	Q12446	633 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	CAR2	P07991	424 aa	Known RBP	4.07	□□□□□ -1.76
SIP1	YDR422C	YIM1	P28625	365 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	PIM1	P36775	1133 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	PFF1	P38244	976 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	RFC5	P38251	354 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	ARP1	P38696	384 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	VPS45	P38932	577 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	YIL077C	P40508	320 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	YGL185C	P53100	379 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	TIM21	P53220	239 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	YGR054W	P53235	642 aa	Known RBP	4.07	□□□□□ -1.76
SIP1	YDR422C	MDR1	P53258	950 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	RCM1	P53972	490 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	REC102	Q02721	264 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	YMR160W	Q03823	816 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	COQ9	Q05779	260 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	ADF1	Q2V2Q1	113 aa		4.07	□□□□□ -1.76
SIP1	YDR422C	VPS63	O13549	108 aa		4.06	□□□□□ -1.76
SIP1	YDR422C	STE3	P06783	470 aa		4.06	□□□□□ -1.76
SIP1	YDR422C	TAL1	P15019	335 aa	Known RBP	4.06	□□□□□ -1.76
SIP1	YDR422C	SEC62	P21825	274 aa		4.06	□□□□□ -1.76
SIP1	YDR422C	PDB1	P32473	366 aa	Known RBP	4.06	□□□□□ -1.76
SIP1	YDR422C	YKT6	P36015	200 aa	Known RBP	4.06	□□□□□ -1.76
SIP1	YDR422C	MRPL7	P36519	292 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms