RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A PEX15Q08215 383 aa0.75□□□□□ -2.29
SDH6YDR379C-A SLX4Q12098 748 aa0.75□□□□□ -2.29
SDH6YDR379C-A VAS1P07806 1104 aaKnown RBP0.74□□□□□ -2.29
SDH6YDR379C-A CHO1P08456 276 aa0.74□□□□□ -2.29
SDH6YDR379C-A SPT15P13393 240 aaKnown RBP0.74□□□□□ -2.29
SDH6YDR379C-A KRS1P15180 591 aaKnown RBP0.74□□□□□ -2.29
SDH6YDR379C-A TKL1P23254 680 aaKnown RBP0.74□□□□□ -2.29
SDH6YDR379C-A PHO3P24031 467 aa0.74□□□□□ -2.29
SDH6YDR379C-A URK1P27515 501 aa0.74□□□□□ -2.29
SDH6YDR379C-A HEM12P32347 362 aaPredicted RBP0.74□□□□□ -2.29
SDH6YDR379C-A SAC1P32368 623 aaKnown RBP0.74□□□□□ -2.29
SDH6YDR379C-A SPC34P36131 295 aa0.74□□□□□ -2.29
SDH6YDR379C-A STV1P37296 890 aa0.74□□□□□ -2.29
SDH6YDR379C-A ADE17P38009 592 aaKnown RBP0.74□□□□□ -2.29
SDH6YDR379C-A NMD2P38798 1089 aaKnown RBP0.74□□□□□ -2.29
SDH6YDR379C-A YER130CP39959 443 aa0.74□□□□□ -2.29
SDH6YDR379C-A BUD16P39988 312 aa0.74□□□□□ -2.29
SDH6YDR379C-A YGR210CP42942 411 aa0.74□□□□□ -2.29
SDH6YDR379C-A PFA5Q03289 374 aa0.74□□□□□ -2.29
SDH6YDR379C-A ECM38Q05902 660 aaPredicted RBP0.74□□□□□ -2.29
SDH6YDR379C-A ATG23Q06671 453 aa0.74□□□□□ -2.29
SDH6YDR379C-A RAP1P11938 827 aa0.73□□□□□ -2.29
SDH6YDR379C-A YSP3P25036 478 aa0.73□□□□□ -2.29
SDH6YDR379C-A GAC1P28006 793 aa0.73□□□□□ -2.29
SDH6YDR379C-A SPC110P32380 944 aa0.73□□□□□ -2.29
SDH6YDR379C-A SDS22P36047 338 aa0.73□□□□□ -2.29
SDH6YDR379C-A RFC1P38630 861 aaKnown RBP0.73□□□□□ -2.29
SDH6YDR379C-A PHO90P39535 881 aa0.73□□□□□ -2.29
SDH6YDR379C-A SCS2P40075 244 aaKnown RBP0.73□□□□□ -2.29
SDH6YDR379C-A IMA5P40884 581 aa0.73□□□□□ -2.29
SDH6YDR379C-A DCP2P53550 970 aaKnown RBP0.73□□□□□ -2.29
SDH6YDR379C-A NUP100Q02629 959 aa0.73□□□□□ -2.29
SDH6YDR379C-A MTG1Q03151 367 aaPredicted RBP0.73□□□□□ -2.29
SDH6YDR379C-A YDL218WQ07629 317 aa0.73□□□□□ -2.29
SDH6YDR379C-A AYT1Q12226 474 aa0.73□□□□□ -2.29
SDH6YDR379C-A RBD2Q12270 262 aa0.73□□□□□ -2.29
SDH6YDR379C-A YER078W-AQ3E7A2 54 aa0.73□□□□□ -2.29
SDH6YDR379C-A PET111P08468 800 aa0.72□□□□□ -2.29
SDH6YDR379C-A ADH4P10127 382 aa0.72□□□□□ -2.29
SDH6YDR379C-A KAR1P11927 433 aa0.72□□□□□ -2.29
SDH6YDR379C-A CLN3P13365 580 aa0.72□□□□□ -2.29
SDH6YDR379C-A SRP54P20424 541 aaKnown RBP0.72□□□□□ -2.29
SDH6YDR379C-A MCM3P24279 971 aaKnown RBP0.72□□□□□ -2.29
SDH6YDR379C-A LRE1P25579 583 aaKnown RBP0.72□□□□□ -2.29
SDH6YDR379C-A RFA2P26754 273 aaKnown RBP0.72□□□□□ -2.29
SDH6YDR379C-A FRD1P32614 470 aaKnown RBP0.72□□□□□ -2.29
SDH6YDR379C-A PAD1P33751 242 aaKnown RBP RIP-Chip data0.72□□□□□ -2.29not detected
SDH6YDR379C-A PHD1P36093 366 aa0.72□□□□□ -2.29
SDH6YDR379C-A UBP13P38187 747 aa0.72□□□□□ -2.29
SDH6YDR379C-A NDT80P38830 627 aa0.72□□□□□ -2.29
SDH6YDR379C-A SWD1P39706 426 aa0.72□□□□□ -2.29
SDH6YDR379C-A YTA12P40341 825 aa0.72□□□□□ -2.29
SDH6YDR379C-A CAB2P40506 365 aa0.72□□□□□ -2.29
SDH6YDR379C-A CTK2P46962 323 aa0.72□□□□□ -2.29
SDH6YDR379C-A YJR142WP47173 342 aa0.72□□□□□ -2.29
SDH6YDR379C-A TAM41P53230 385 aa0.72□□□□□ -2.29
SDH6YDR379C-A YTP1P53584 459 aa0.72□□□□□ -2.29
SDH6YDR379C-A MOT3P54785 490 aaKnown RBP0.72□□□□□ -2.29
SDH6YDR379C-A TRE2Q08693 809 aa0.72□□□□□ -2.29
SDH6YDR379C-A ICL2Q12031 575 aa0.72□□□□□ -2.29
SDH6YDR379C-A ARP6Q12509 438 aa0.72□□□□□ -2.29
SDH6YDR379C-A HEM2P05373 342 aa0.71□□□□□ -2.3
SDH6YDR379C-A YML003WP0CF16 290 aa0.71□□□□□ -2.3
SDH6YDR379C-A BIK1P11709 440 aa0.71□□□□□ -2.3
SDH6YDR379C-A ACH1P32316 526 aa0.71□□□□□ -2.3
SDH6YDR379C-A LHS1P36016 881 aa0.71□□□□□ -2.3
SDH6YDR379C-A MIA40P36046 403 aa0.71□□□□□ -2.3
SDH6YDR379C-A AAP1P37898 856 aaKnown RBP0.71□□□□□ -2.3
SDH6YDR379C-A MTC4P38335 694 aaKnown RBP0.71□□□□□ -2.3
SDH6YDR379C-A SAW1P39735 261 aa0.71□□□□□ -2.3
SDH6YDR379C-A MRX1P40050 688 aa0.71□□□□□ -2.3
SDH6YDR379C-A YIL060WP40519 144 aa0.71□□□□□ -2.3
SDH6YDR379C-A RPN11P43588 306 aaKnown RBP0.71□□□□□ -2.3
SDH6YDR379C-A CNM67P53865 581 aaKnown RBP0.71□□□□□ -2.3
SDH6YDR379C-A RBA50Q04418 439 aa0.71□□□□□ -2.3
SDH6YDR379C-A SWA2Q06677 668 aa0.71□□□□□ -2.3
SDH6YDR379C-A CDC45Q08032 650 aa0.71□□□□□ -2.3
SDH6YDR379C-A HNT3Q08702 217 aa0.71□□□□□ -2.3
SDH6YDR379C-A NUR1Q12066 484 aa0.71□□□□□ -2.3
SDH6YDR379C-A RFM1Q12192 310 aa0.71□□□□□ -2.3
SDH6YDR379C-A YGR161W-CQ3E744 92 aa0.71□□□□□ -2.3
SDH6YDR379C-A SUP35P05453 685 aaKnown RBP0.7□□□□□ -2.3
SDH6YDR379C-A RPL20AP0CX23 172 aaKnown RBP0.7□□□□□ -2.3
SDH6YDR379C-A RPL20BP0CX24 172 aaPredicted RBP0.7□□□□□ -2.3
SDH6YDR379C-A PET122P10355 254 aa0.7□□□□□ -2.3
SDH6YDR379C-A TYR1P20049 452 aa0.7□□□□□ -2.3
SDH6YDR379C-A SIR1P21691 654 aa0.7□□□□□ -2.3
SDH6YDR379C-A PCL1P24867 279 aa0.7□□□□□ -2.3
SDH6YDR379C-A MRC1P25588 1096 aa0.7□□□□□ -2.3
SDH6YDR379C-A MCM4P30665 933 aaKnown RBP0.7□□□□□ -2.3
SDH6YDR379C-A PTR2P32901 601 aa0.7□□□□□ -2.3
SDH6YDR379C-A SOF1P33750 489 aaKnown RBP0.7□□□□□ -2.3
SDH6YDR379C-A YNK1P36010 153 aaKnown RBP0.7□□□□□ -2.3
SDH6YDR379C-A YBR071WP38243 211 aa0.7□□□□□ -2.3
SDH6YDR379C-A ECM10P39987 644 aa0.7□□□□□ -2.3
SDH6YDR379C-A YGL082WP53155 381 aa0.7□□□□□ -2.3
SDH6YDR379C-A PKP2P53170 491 aa0.7□□□□□ -2.3
SDH6YDR379C-A SOL4P53315 255 aa0.7□□□□□ -2.3
SDH6YDR379C-A HAL1Q01766 294 aa0.7□□□□□ -2.3
SDH6YDR379C-A MSS11Q03825 758 aa0.7□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms