RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	STB6	P36085	766 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	LRP1	P38801	184 aa	Known RBP	7.24	□□□□□ -1.25
SKP1	YDR328C	BOL2	P53082	120 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	FRE4	P53746	719 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	YNR061C	P53747	219 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	YMR178W	Q03219	274 aa	Known RBP	7.24	□□□□□ -1.25
SKP1	YDR328C	TVP15	Q03860	143 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	HPT1	Q04178	221 aa	Known RBP	7.24	□□□□□ -1.25
SKP1	YDR328C	SPO20	Q04359	397 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	YPR084W	Q06821	456 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	HBT1	Q07653	1046 aa	Known RBP	7.24	□□□□□ -1.25
SKP1	YDR328C	UBX3	Q12229	455 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	MDY2	Q12285	212 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	YPT6	Q99260	215 aa		7.24	□□□□□ -1.25
SKP1	YDR328C	CET1	O13297	549 aa	Predicted RBP	7.23	□□□□□ -1.25
SKP1	YDR328C	COX6	P00427	148 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	FUS1	P11710	512 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	APA1	P16550	321 aa	Known RBP	7.23	□□□□□ -1.25
SKP1	YDR328C	HEM3	P28789	327 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	MRE11	P32829	692 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	THI80	P35202	319 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	ASK1	P35734	292 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	7.23	□□□□□ -1.25	not detected
SKP1	YDR328C	YBR259W	P38338	688 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	YHB1	P39676	399 aa	Known RBP	7.23	□□□□□ -1.25
SKP1	YDR328C	MGS1	P40151	587 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	SER33	P40510	469 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	AXL1	P40851	1208 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	GCD14	P46959	383 aa	Predicted RBP	7.23	□□□□□ -1.25
SKP1	YDR328C	TEL2	P53038	688 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	NMA2	P53204	395 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	ARP4	P80428	489 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	CIA1	Q05583	330 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	BLS1	Q06071	122 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	ENT4	Q07872	247 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	TGL5	Q12043	749 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	UPC2	Q12151	913 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	RIB2	Q12362	591 aa	Known RBP	7.23	□□□□□ -1.25
SKP1	YDR328C	ICT1	Q12385	394 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	STB3	Q12427	513 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	YPL247C	Q12523	523 aa		7.23	□□□□□ -1.25
SKP1	YDR328C	YPR089W	O13585	888 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	RHO2	P06781	192 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	SEC53	P07283	254 aa	Known RBP	7.22	□□□□□ -1.25
SKP1	YDR328C	PRP16	P15938	1071 aa	Predicted RBP	7.22	□□□□□ -1.25
SKP1	YDR328C	VAC17	P25591	423 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	YCR090C	P25654	182 aa	Known RBP	7.22	□□□□□ -1.25
SKP1	YDR328C	PTM1	P32857	523 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	PRP18	P33411	251 aa	Predicted RBP	7.22	□□□□□ -1.25
SKP1	YDR328C	RRN3	P36070	627 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	CTP1	P38152	299 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	ARP1	P38696	384 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	DBP8	P38719	431 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	STN1	P38960	494 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	NUP84	P52891	726 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	AIF1	P52923	378 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	MTO1	P53070	669 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	COG7	P53195	279 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	YNR014W	P53719	212 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	NHP10	Q03435	203 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	CRN1	Q06440	651 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	BUD7	Q08754	746 aa		7.22	□□□□□ -1.25
SKP1	YDR328C	SMF3	Q12078	473 aa	Predicted RBP	7.22	□□□□□ -1.25
SKP1	YDR328C	HSC82	P15108	705 aa	Known RBP	7.21	□□□□□ -1.26
SKP1	YDR328C	VAN1	P23642	535 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	RPC19	P28000	142 aa	Known RBP	7.21	□□□□□ -1.26
SKP1	YDR328C	DEP1	P31385	405 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	SPT23	P35210	1082 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	7.21	□□□□□ -1.26	not detected
SKP1	YDR328C	IRR1	P40541	1150 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	SWC4	P53201	476 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	CLD1	P53264	445 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	7.21	□□□□□ -1.26	RIP-Chip
SKP1	YDR328C	OSH6	Q02201	448 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	RMI1	Q02685	241 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	YMR102C	Q03177	834 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	RPC11	Q04307	110 aa	Predicted RBP	7.21	□□□□□ -1.26
SKP1	YDR328C	RCO1	Q04779	684 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	YOL019W	Q08157	551 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	YOR012W	Q12351	137 aa		7.21	□□□□□ -1.26
SKP1	YDR328C	SBP1	P10080	294 aa	Known RBP	7.2	□□□□□ -1.26
SKP1	YDR328C	EXO70	P19658	623 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	RPB4	P20433	221 aa	Predicted RBP	7.2	□□□□□ -1.26
SKP1	YDR328C	EPT1	P22140	391 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	GUT1	P32190	709 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	TIP20	P33891	701 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	IML3	P38265	245 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	EFM1	P38732	585 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	YHR045W	P38775	560 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	PCL5	P38794	229 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	GDH3	P39708	457 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	MEP1	P40260	492 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	GAT1	P43574	510 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	RPS0B	P46654	252 aa	Known RBP	7.2	□□□□□ -1.26
SKP1	YDR328C	DAN4	P47179	1161 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	MRM2	P53123	320 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	GOT1	Q03554	138 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	FMN1	Q03778	218 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	SEC10	Q06245	871 aa		7.2	□□□□□ -1.26
SKP1	YDR328C	HDA3	Q06623	655 aa		7.2	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 87.3 ms