RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C TY2A-DR3Q99303 438 aa3.04□□□□□ -1.92
SNU56YDR240C EDE1P34216 1381 aa3.04□□□□□ -1.92
SNU56YDR240C TPK1P06244 397 aa3.03□□□□□ -1.92
SNU56YDR240C YML002WP0CF17 737 aa3.03□□□□□ -1.92
SNU56YDR240C MTF2P10849 440 aa3.03□□□□□ -1.92
SNU56YDR240C BAR1P12630 587 aa3.03□□□□□ -1.92
SNU56YDR240C YEF3P16521 1044 aaKnown RBP3.03□□□□□ -1.92
SNU56YDR240C GID7P25569 745 aa3.03□□□□□ -1.92
SNU56YDR240C STV1P37296 890 aa3.03□□□□□ -1.92
SNU56YDR240C RGI2P40188 164 aa3.03□□□□□ -1.92
SNU56YDR240C PSF2P40359 213 aa3.03□□□□□ -1.92
SNU56YDR240C HXT9P40885 567 aa3.03□□□□□ -1.92
SNU56YDR240C COG1P53079 417 aa3.03□□□□□ -1.92
SNU56YDR240C ERG27Q12452 347 aaKnown RBP3.03□□□□□ -1.92
SNU56YDR240C TRS65P32893 560 aa3.03□□□□□ -1.93
SNU56YDR240C MIA40P36046 403 aa3.03□□□□□ -1.93
SNU56YDR240C RIM2P38127 377 aa3.03□□□□□ -1.93
SNU56YDR240C PKP1P40530 394 aa3.03□□□□□ -1.93
SNU56YDR240C SMC3P47037 1230 aa3.03□□□□□ -1.93
SNU56YDR240C YTP1P53584 459 aa3.03□□□□□ -1.93
SNU56YDR240C ARC35P53731 342 aaKnown RBP3.03□□□□□ -1.93
SNU56YDR240C MRPL13Q02204 264 aa3.03□□□□□ -1.93
SNU56YDR240C SMA1Q02651 245 aa3.03□□□□□ -1.93
SNU56YDR240C TMA16Q08687 178 aa3.03□□□□□ -1.93
SNU56YDR240C BSC1Q12140 328 aa3.03□□□□□ -1.93
SNU56YDR240C TIP41Q12199 356 aa3.03□□□□□ -1.93
SNU56YDR240C COX17Q12287 69 aa3.03□□□□□ -1.93
SNU56YDR240C UBC1P21734 215 aaKnown RBP3.02□□□□□ -1.93
SNU56YDR240C ESL2P36168 1195 aa3.02□□□□□ -1.93
SNU56YDR240C PHO90P39535 881 aa3.02□□□□□ -1.93
SNU56YDR240C RPT2P40327 437 aaKnown RBP3.02□□□□□ -1.93
SNU56YDR240C IST3P40565 148 aaPredicted RBP3.02□□□□□ -1.93
SNU56YDR240C FCP1Q03254 732 aa3.02□□□□□ -1.93
SNU56YDR240C YDR415CQ04033 374 aaPredicted RBP3.02□□□□□ -1.93
SNU56YDR240C CSR1Q06705 408 aaKnown RBP3.02□□□□□ -1.93
SNU56YDR240C HXK2P04807 486 aaKnown RBP3.01□□□□□ -1.93
SNU56YDR240C NUC1P08466 329 aa3.01□□□□□ -1.93
SNU56YDR240C RAD16P31244 790 aa3.01□□□□□ -1.93
SNU56YDR240C XRS2P33301 854 aa3.01□□□□□ -1.93
SNU56YDR240C MIC60P36112 540 aa3.01□□□□□ -1.93
SNU56YDR240C FET5P43561 622 aa3.01□□□□□ -1.93
SNU56YDR240C YFR020WP43600 232 aa3.01□□□□□ -1.93
SNU56YDR240C UBX4P54730 416 aa3.01□□□□□ -1.93
SNU56YDR240C CIA1Q05583 330 aa3.01□□□□□ -1.93
SNU56YDR240C BLS1Q06071 122 aa3.01□□□□□ -1.93
SNU56YDR240C PSR2Q07949 397 aa3.01□□□□□ -1.93
SNU56YDR240C DAP1Q12091 152 aa3.01□□□□□ -1.93
SNU56YDR240C VCX1Q99385 411 aa3.01□□□□□ -1.93
SNU56YDR240C DHH1P39517 506 aaKnown RBP3□□□□□ -1.93
SNU56YDR240C YJR061WP40355 935 aa3□□□□□ -1.93
SNU56YDR240C PFK26P40433 827 aaKnown RBP3□□□□□ -1.93
SNU56YDR240C DIM1P41819 318 aaKnown RBP3□□□□□ -1.93
SNU56YDR240C IMP4P53941 290 aaKnown RBP3□□□□□ -1.93
SNU56YDR240C TFC6Q06339 672 aa3□□□□□ -1.93
SNU56YDR240C YDL218WQ07629 317 aa3□□□□□ -1.93
SNU56YDR240C YBR298C-AQ8TGK4 73 aa3□□□□□ -1.93
SNU56YDR240C CTF18P49956 741 aa2.99□□□□□ -1.93
SNU56YDR240C VPS4P52917 437 aa2.99□□□□□ -1.93
SNU56YDR240C NNF2P53253 936 aa2.99□□□□□ -1.93
SNU56YDR240C CYB2P00175 591 aa2.98□□□□□ -1.93
SNU56YDR240C GLN3P18494 730 aa2.98□□□□□ -1.93
SNU56YDR240C PRO3P32263 286 aaKnown RBP2.98□□□□□ -1.93
SNU56YDR240C YKL050CP35736 922 aa2.98□□□□□ -1.93
SNU56YDR240C SPC34P36131 295 aa2.98□□□□□ -1.93
SNU56YDR240C ERG7P38604 731 aa2.98□□□□□ -1.93
SNU56YDR240C UIP3P39547 235 aa2.98□□□□□ -1.93
SNU56YDR240C AZF1P41696 914 aa2.98□□□□□ -1.93
SNU56YDR240C ROK1P45818 564 aaPredicted RBP2.98□□□□□ -1.93
SNU56YDR240C ATG26Q06321 1198 aa2.98□□□□□ -1.93
SNU56YDR240C YOL057WQ08225 711 aa2.98□□□□□ -1.93
SNU56YDR240C APL4Q12028 832 aa2.98□□□□□ -1.93
SNU56YDR240C PPT2Q12036 173 aa2.98□□□□□ -1.93
SNU56YDR240C PCD1Q12524 340 aa2.98□□□□□ -1.93
SNU56YDR240C IFA38P38286 347 aa2.97□□□□□ -1.93
SNU56YDR240C RRP3P38712 501 aaKnown RBP2.97□□□□□ -1.93
SNU56YDR240C YIL060WP40519 144 aa2.97□□□□□ -1.93
SNU56YDR240C GUF1P46943 645 aa2.97□□□□□ -1.93
SNU56YDR240C DPB11P47027 764 aaPredicted RBP2.97□□□□□ -1.93
SNU56YDR240C NUP100Q02629 959 aa2.97□□□□□ -1.93
SNU56YDR240C NUS1Q12063 375 aa2.97□□□□□ -1.93
SNU56YDR240C ATG9Q12142 997 aa2.97□□□□□ -1.93
SNU56YDR240C NKP1Q12493 238 aa2.97□□□□□ -1.93
SNU56YDR240C ARP6Q12509 438 aa2.97□□□□□ -1.93
SNU56YDR240C CSR2Q12734 1121 aa2.97□□□□□ -1.93
SNU56YDR240C PRP16P15938 1071 aaPredicted RBP2.96□□□□□ -1.93
SNU56YDR240C PDA1P16387 420 aaKnown RBP2.96□□□□□ -1.93
SNU56YDR240C ERG1P32476 496 aaKnown RBP2.96□□□□□ -1.93
SNU56YDR240C TEF4P36008 412 aaKnown RBP2.96□□□□□ -1.93
SNU56YDR240C SMK1P41808 388 aa2.96□□□□□ -1.93
SNU56YDR240C TMA64Q04600 565 aaKnown RBP2.96□□□□□ -1.93
SNU56YDR240C INP53Q12271 1107 aa2.96□□□□□ -1.93
SNU56YDR240C PFK2P16862 959 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
SNU56YDR240C SPE2P21182 396 aa2.96□□□□□ -1.94
SNU56YDR240C ERG8P24521 451 aa2.96□□□□□ -1.94
SNU56YDR240C CPR3P25719 182 aa2.96□□□□□ -1.94
SNU56YDR240C SNU114P36048 1008 aaKnown RBP2.96□□□□□ -1.94
SNU56YDR240C PHD1P36093 366 aa2.96□□□□□ -1.94
SNU56YDR240C YBR139WP38109 508 aa2.96□□□□□ -1.94
SNU56YDR240C SDS24P38314 527 aa2.96□□□□□ -1.94
SNU56YDR240C UME6P39001 836 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms