RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRI1	YDL216C	YFR020W	P43600	232 aa		4.59	□□□□□ -1.67
RRI1	YDL216C	LYS20	P48570	428 aa	Known RBP	4.59	□□□□□ -1.67
RRI1	YDL216C	CIR2	Q08822	631 aa		4.59	□□□□□ -1.67
RRI1	YDL216C	FUM1	P08417	488 aa	Known RBP	4.58	□□□□□ -1.68
RRI1	YDL216C	CLB2	P24869	491 aa		4.58	□□□□□ -1.68
RRI1	YDL216C	ALY1	P36117	915 aa		4.58	□□□□□ -1.68
RRI1	YDL216C	KTR3	P38130	404 aa	Predicted RBP	4.58	□□□□□ -1.68
RRI1	YDL216C	PCL6	P40038	420 aa		4.58	□□□□□ -1.68
RRI1	YDL216C	YJR061W	P40355	935 aa		4.58	□□□□□ -1.68
RRI1	YDL216C	SEC24	P40482	926 aa	Known RBP	4.58	□□□□□ -1.68
RRI1	YDL216C	DPB11	P47027	764 aa	Predicted RBP	4.58	□□□□□ -1.68
RRI1	YDL216C	AAD10	P47182	288 aa		4.58	□□□□□ -1.68
RRI1	YDL216C	INA17	Q02888	182 aa		4.58	□□□□□ -1.68
RRI1	YDL216C	ARP10	Q04549	284 aa		4.58	□□□□□ -1.68
RRI1	YDL216C	SKG3	Q06315	1026 aa		4.58	□□□□□ -1.68
RRI1	YDL216C	MCP2	Q06567	569 aa		4.58	□□□□□ -1.68
RRI1	YDL216C	YNG2	P38806	282 aa	Known RBP	4.57	□□□□□ -1.68
RRI1	YDL216C	UIP3	P39547	235 aa		4.57	□□□□□ -1.68
RRI1	YDL216C	YIL152W	P40455	235 aa		4.57	□□□□□ -1.68
RRI1	YDL216C	ARC1	P46672	376 aa	Known RBP	4.57	□□□□□ -1.68
RRI1	YDL216C	PIL1	P53252	339 aa	Known RBP	4.57	□□□□□ -1.68
RRI1	YDL216C	NNF2	P53253	936 aa		4.57	□□□□□ -1.68
RRI1	YDL216C	YMR178W	Q03219	274 aa	Known RBP	4.57	□□□□□ -1.68
RRI1	YDL216C	UTP21	Q06078	939 aa	Predicted RBP	4.57	□□□□□ -1.68
RRI1	YDL216C	MLH2	Q07980	695 aa		4.57	□□□□□ -1.68
RRI1	YDL216C	YLR112W	Q12130	139 aa		4.57	□□□□□ -1.68
RRI1	YDL216C	PRE8	P23639	250 aa		4.56	□□□□□ -1.68
RRI1	YDL216C	YKL050C	P35736	922 aa		4.56	□□□□□ -1.68
RRI1	YDL216C	VRG4	P40107	337 aa		4.56	□□□□□ -1.68
RRI1	YDL216C	SIP4	P46954	829 aa		4.56	□□□□□ -1.68
RRI1	YDL216C	BSC5	P53755	489 aa		4.56	□□□□□ -1.68
RRI1	YDL216C	IZH1	Q03419	316 aa		4.56	□□□□□ -1.68
RRI1	YDL216C	SNA4	Q07549	140 aa		4.56	□□□□□ -1.68
RRI1	YDL216C	APL4	Q12028	832 aa		4.56	□□□□□ -1.68
RRI1	YDL216C	SKM1	Q12469	655 aa		4.56	□□□□□ -1.68
RRI1	YDL216C	SPE2	P21182	396 aa		4.55	□□□□□ -1.68
RRI1	YDL216C	PDB1	P32473	366 aa	Known RBP	4.55	□□□□□ -1.68
RRI1	YDL216C	MNN2	P38069	597 aa		4.55	□□□□□ -1.68
RRI1	YDL216C	RFC1	P38630	861 aa	Known RBP	4.55	□□□□□ -1.68
RRI1	YDL216C	DIA4	P38705	446 aa	Predicted RBP	4.55	□□□□□ -1.68
RRI1	YDL216C	FMP10	P40098	244 aa		4.55	□□□□□ -1.68
RRI1	YDL216C	SCS3	P53012	380 aa		4.55	□□□□□ -1.68
RRI1	YDL216C	YTP1	P53584	459 aa		4.55	□□□□□ -1.68
RRI1	YDL216C	YNL181W	P53878	407 aa		4.55	□□□□□ -1.68
RRI1	YDL216C	CTL1	Q03220	320 aa	Known RBP	4.55	□□□□□ -1.68
RRI1	YDL216C	NUP53	Q03790	475 aa		4.55	□□□□□ -1.68
RRI1	YDL216C	ARP9	Q05123	467 aa		4.55	□□□□□ -1.68
RRI1	YDL216C	YLR281C	Q05863	155 aa		4.55	□□□□□ -1.68
RRI1	YDL216C	SRL1	Q08673	210 aa		4.55	□□□□□ -1.68
RRI1	YDL216C	INP53	Q12271	1107 aa		4.55	□□□□□ -1.68
RRI1	YDL216C	RPL42A	P0CX27	106 aa	Known RBP	4.54	□□□□□ -1.68
RRI1	YDL216C	RPL42B	P0CX28	106 aa	Known RBP	4.54	□□□□□ -1.68
RRI1	YDL216C	CDC24	P11433	854 aa	Predicted RBP	4.54	□□□□□ -1.68
RRI1	YDL216C	SNU114	P36048	1008 aa	Known RBP	4.54	□□□□□ -1.68
RRI1	YDL216C	STV1	P37296	890 aa		4.54	□□□□□ -1.68
RRI1	YDL216C	LSC1	P53598	329 aa	Known RBP	4.54	□□□□□ -1.68
RRI1	YDL216C	INN1	P53901	409 aa		4.54	□□□□□ -1.68
RRI1	YDL216C	PSR1	Q07800	427 aa		4.54	□□□□□ -1.68
RRI1	YDL216C	BUD7	Q08754	746 aa		4.54	□□□□□ -1.68
RRI1	YDL216C	ATG9	Q12142	997 aa		4.54	□□□□□ -1.68
RRI1	YDL216C	CBP1	P07252	654 aa		4.53	□□□□□ -1.68
RRI1	YDL216C	GAC1	P28006	793 aa		4.53	□□□□□ -1.68
RRI1	YDL216C	MIA40	P36046	403 aa		4.53	□□□□□ -1.68
RRI1	YDL216C	ARC40	P38328	384 aa	Known RBP	4.53	□□□□□ -1.68
RRI1	YDL216C	LEU5	P38702	357 aa		4.53	□□□□□ -1.68
RRI1	YDL216C	DPH1	P40487	425 aa	Known RBP	4.53	□□□□□ -1.68
RRI1	YDL216C	SGF73	P53165	657 aa		4.53	□□□□□ -1.68
RRI1	YDL216C	MEP3	P53390	489 aa		4.53	□□□□□ -1.68
RRI1	YDL216C	YNL234W	P53857	426 aa		4.53	□□□□□ -1.68
RRI1	YDL216C	RIX7	Q07844	837 aa	Known RBP	4.53	□□□□□ -1.68
RRI1	YDL216C	NKP1	Q12493	238 aa		4.53	□□□□□ -1.68
RRI1	YDL216C	YFL068W	P0CX99	160 aa		4.52	□□□□□ -1.69
RRI1	YDL216C	YLL066W-A	P0CY00	160 aa		4.52	□□□□□ -1.69
RRI1	YDL216C	YLL067W-A	P0CY01	160 aa		4.52	□□□□□ -1.69
RRI1	YDL216C	RPB8	P20436	146 aa		4.52	□□□□□ -1.69
RRI1	YDL216C	MCM10	P32354	571 aa		4.52	□□□□□ -1.69
RRI1	YDL216C	AGP2	P38090	596 aa		4.52	□□□□□ -1.69
RRI1	YDL216C	BUR6	P40096	142 aa		4.52	□□□□□ -1.69
RRI1	YDL216C	YMR034C	Q05131	434 aa	Predicted RBP	4.52	□□□□□ -1.69
RRI1	YDL216C	ENT4	Q07872	247 aa		4.52	□□□□□ -1.69
RRI1	YDL216C	TCO89	Q08921	799 aa		4.52	□□□□□ -1.69
RRI1	YDL216C	VMA16	P23968	213 aa		4.51	□□□□□ -1.69
RRI1	YDL216C	LCB1	P25045	558 aa	Known RBP	4.51	□□□□□ -1.69
RRI1	YDL216C	YUR1	P26725	428 aa		4.51	□□□□□ -1.69
RRI1	YDL216C	YPK3	P38070	525 aa		4.51	□□□□□ -1.69
RRI1	YDL216C	RKM3	P38222	552 aa		4.51	□□□□□ -1.69
RRI1	YDL216C	IAH1	P41734	238 aa		4.51	□□□□□ -1.69
RRI1	YDL216C	DIA3	P52290	468 aa		4.51	□□□□□ -1.69
RRI1	YDL216C	ESBP6	P53918	673 aa		4.51	□□□□□ -1.69
RRI1	YDL216C	YOR111W	Q99210	232 aa		4.51	□□□□□ -1.69
RRI1	YDL216C	PWP1	P21304	576 aa	Known RBP	4.5	□□□□□ -1.69
RRI1	YDL216C	YCR043C	P25361	127 aa		4.5	□□□□□ -1.69
RRI1	YDL216C	ADH7	P25377	361 aa		4.5	□□□□□ -1.69
RRI1	YDL216C	RTS1	P38903	757 aa		4.5	□□□□□ -1.69
RRI1	YDL216C	YIL169C	P40442	995 aa		4.5	□□□□□ -1.69
RRI1	YDL216C	HXT9	P40885	567 aa		4.5	□□□□□ -1.69
RRI1	YDL216C	TES1	P41903	349 aa	Known RBP	4.5	□□□□□ -1.69
RRI1	YDL216C	MAK10	Q02197	733 aa		4.5	□□□□□ -1.69
RRI1	YDL216C	RAD30	Q04049	632 aa		4.5	□□□□□ -1.69
RRI1	YDL216C	YMR254C	Q04838	102 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms