RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C STE23Q06010 1027 aa5.24□□□□□ -1.57
SCM3YDL139C RXT3Q07458 294 aa5.24□□□□□ -1.57
SCM3YDL139C ADY3Q07732 790 aa5.24□□□□□ -1.57
SCM3YDL139C GUP2Q08929 609 aa5.24□□□□□ -1.57
SCM3YDL139C DDC1Q08949 612 aa5.24□□□□□ -1.57
SCM3YDL139C SGT2Q12118 346 aaKnown RBP5.24□□□□□ -1.57
SCM3YDL139C LCB4Q12246 624 aa5.24□□□□□ -1.57
SCM3YDL139C CDC8P00572 216 aa5.23□□□□□ -1.57
SCM3YDL139C ILV2P07342 687 aaKnown RBP5.23□□□□□ -1.57
SCM3YDL139C ADK2P26364 225 aa5.23□□□□□ -1.57
SCM3YDL139C POA1P38218 177 aa5.23□□□□□ -1.57
SCM3YDL139C SPP381P38282 291 aaPredicted RBP5.23□□□□□ -1.57
SCM3YDL139C ATM1P40416 690 aa5.23□□□□□ -1.57
SCM3YDL139C CDC1P40986 491 aa5.23□□□□□ -1.57
SCM3YDL139C SMC3P47037 1230 aa5.23□□□□□ -1.57
SCM3YDL139C UBC9P50623 157 aaPredicted RBP5.23□□□□□ -1.57
SCM3YDL139C MTQ2Q03920 221 aaPredicted RBP5.23□□□□□ -1.57
SCM3YDL139C ARA2Q04212 335 aa5.23□□□□□ -1.57
SCM3YDL139C ARP9Q05123 467 aa5.23□□□□□ -1.57
SCM3YDL139C CRR1Q05790 422 aa5.23□□□□□ -1.57
SCM3YDL139C AIM39Q08223 395 aa5.23□□□□□ -1.57
SCM3YDL139C APL5Q08951 932 aaKnown RBP5.23□□□□□ -1.57
SCM3YDL139C THI21Q08975 551 aa5.23□□□□□ -1.57
SCM3YDL139C PKH2Q12236 1081 aaKnown RBP5.23□□□□□ -1.57
SCM3YDL139C UBR1P19812 1950 aa5.22□□□□□ -1.57
SCM3YDL139C PUT4P15380 627 aa5.22□□□□□ -1.57
SCM3YDL139C POL3P15436 1097 aa5.22□□□□□ -1.57
SCM3YDL139C GDA1P32621 518 aa5.22□□□□□ -1.57
SCM3YDL139C TOM20P35180 183 aa5.22□□□□□ -1.57
SCM3YDL139C RFS1P38234 210 aaKnown RBP5.22□□□□□ -1.57
SCM3YDL139C SLX1P38324 304 aa5.22□□□□□ -1.57
SCM3YDL139C SWC5P38326 303 aa5.22□□□□□ -1.57
SCM3YDL139C PCA1P38360 1216 aa5.22□□□□□ -1.57
SCM3YDL139C YJR096WP47137 282 aa5.22□□□□□ -1.57
SCM3YDL139C YML6P51998 286 aa5.22□□□□□ -1.57
SCM3YDL139C SHE10P53075 577 aa5.22□□□□□ -1.57
SCM3YDL139C YGR127WP53275 312 aa5.22□□□□□ -1.57
SCM3YDL139C PBP1P53297 722 aaKnown RBP5.22□□□□□ -1.57
SCM3YDL139C RCR2Q03446 210 aaKnown RBP5.22□□□□□ -1.57
SCM3YDL139C HRD3Q05787 833 aa5.22□□□□□ -1.57
SCM3YDL139C YOR387CQ08910 206 aa5.22□□□□□ -1.57
SCM3YDL139C HFI1Q12060 488 aa5.22□□□□□ -1.57
SCM3YDL139C IZH4Q99393 312 aa5.22□□□□□ -1.57
SCM3YDL139C GID7P25569 745 aa5.21□□□□□ -1.58
SCM3YDL139C YCR051WP25631 222 aa5.21□□□□□ -1.58
SCM3YDL139C SKG6P32900 734 aaPredicted RBP5.21□□□□□ -1.58
SCM3YDL139C BUD2P33314 1104 aa5.21□□□□□ -1.58
SCM3YDL139C CAB3P36076 571 aa5.21□□□□□ -1.58
SCM3YDL139C SMF2P38778 549 aa5.21□□□□□ -1.58
SCM3YDL139C PPE1P38796 400 aa5.21□□□□□ -1.58
SCM3YDL139C STN1P38960 494 aa5.21□□□□□ -1.58
SCM3YDL139C FHL1P39521 936 aa5.21□□□□□ -1.58
SCM3YDL139C ARG2P40360 574 aa5.21□□□□□ -1.58
SCM3YDL139C OPT1P40897 799 aa5.21□□□□□ -1.58
SCM3YDL139C GPP1P41277 250 aaKnown RBP5.21□□□□□ -1.58
SCM3YDL139C SNG1P46950 547 aa5.21□□□□□ -1.58
SCM3YDL139C TIM13P53299 105 aa5.21□□□□□ -1.58
SCM3YDL139C BIO4P53630 237 aa5.21□□□□□ -1.58
SCM3YDL139C CPR6P53691 371 aaKnown RBP5.21□□□□□ -1.58
SCM3YDL139C KTR6P54070 446 aa5.21□□□□□ -1.58
SCM3YDL139C YAP6Q03935 383 aa5.21□□□□□ -1.58
SCM3YDL139C PRM6Q04705 352 aa5.21□□□□□ -1.58
SCM3YDL139C ADE13Q05911 482 aaKnown RBP5.21□□□□□ -1.58
SCM3YDL139C THI7Q05998 598 aa5.21□□□□□ -1.58
SCM3YDL139C TMA10Q06177 86 aa5.21□□□□□ -1.58
SCM3YDL139C OSW1Q08692 278 aa5.21□□□□□ -1.58
SCM3YDL139C YPL225WQ08971 146 aaKnown RBP5.21□□□□□ -1.58
SCM3YDL139C APC9Q12107 265 aa5.21□□□□□ -1.58
SCM3YDL139C AVL9Q12500 764 aa5.21□□□□□ -1.58
SCM3YDL139C RMD5Q12508 421 aa5.21□□□□□ -1.58
SCM3YDL139C APM4Q99186 491 aa5.21□□□□□ -1.58
SCM3YDL139C Q0142Q9ZZW4 58 aa5.21□□□□□ -1.58
SCM3YDL139C TUB3P09734 445 aaKnown RBP5.2□□□□□ -1.58
SCM3YDL139C SNA3P14359 133 aa5.2□□□□□ -1.58
SCM3YDL139C HSP26P15992 214 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
SCM3YDL139C SLY1P22213 666 aa5.2□□□□□ -1.58
SCM3YDL139C SEC14P24280 304 aaKnown RBP5.2□□□□□ -1.58
SCM3YDL139C EMC1P25574 760 aa5.2□□□□□ -1.58
SCM3YDL139C LRE1P25579 583 aaKnown RBP5.2□□□□□ -1.58
SCM3YDL139C CCR4P31384 837 aaKnown RBP5.2□□□□□ -1.58
SCM3YDL139C PRP19P32523 503 aaKnown RBP5.2□□□□□ -1.58
SCM3YDL139C PAH1P32567 862 aa5.2□□□□□ -1.58
SCM3YDL139C YKR051WP36142 418 aa5.2□□□□□ -1.58
SCM3YDL139C YBR053CP38235 358 aa5.2□□□□□ -1.58
SCM3YDL139C CTF8P38877 133 aa5.2□□□□□ -1.58
SCM3YDL139C PMC1P38929 1173 aaPredicted RBP5.2□□□□□ -1.58
SCM3YDL139C ECM1P39715 212 aa5.2□□□□□ -1.58
SCM3YDL139C MRX1P40050 688 aa5.2□□□□□ -1.58
SCM3YDL139C DOT6P40059 670 aaKnown RBP5.2□□□□□ -1.58
SCM3YDL139C SDP1P40479 209 aa5.2□□□□□ -1.58
SCM3YDL139C YIR016WP40572 265 aa5.2□□□□□ -1.58
SCM3YDL139C MET12P46151 657 aa5.2□□□□□ -1.58
SCM3YDL139C YJR039WP47107 1121 aa5.2□□□□□ -1.58
SCM3YDL139C YJR054WP47114 497 aa5.2□□□□□ -1.58
SCM3YDL139C TRM112P53738 135 aaPredicted RBP5.2□□□□□ -1.58
SCM3YDL139C ADA2Q02336 434 aa5.2□□□□□ -1.58
SCM3YDL139C HOT1Q03213 719 aa5.2□□□□□ -1.58
SCM3YDL139C HER2Q03557 464 aa5.2□□□□□ -1.58
SCM3YDL139C YLR177WQ06251 628 aa5.2□□□□□ -1.58
SCM3YDL139C DNL4Q08387 944 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms