RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN4	YDL020C	CMK1	P27466	446 aa	Known RBP	4.17	□□□□□ -1.74
RPN4	YDL020C	AGP2	P38090	596 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	FLC2	P39719	783 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	PKP1	P40530	394 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	YJL107C	P42947	387 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	SNO3	P43544	222 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	RPS7B	P48164	190 aa	Known RBP	4.17	□□□□□ -1.74
RPN4	YDL020C	DSD1	P53095	428 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	RBG2	P53295	368 aa	Known RBP	4.17	□□□□□ -1.74
RPN4	YDL020C	LGE1	Q02796	332 aa	Known RBP	4.17	□□□□□ -1.74
RPN4	YDL020C	CIR2	Q08822	631 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	PFA4	Q12006	378 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	NMD4	Q12129	218 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	ATG9	Q12142	997 aa		4.17	□□□□□ -1.74
RPN4	YDL020C	YMR085W	P0CF18	432 aa		4.16	□□□□□ -1.74
RPN4	YDL020C	MRP7	P12687	371 aa		4.16	□□□□□ -1.74
RPN4	YDL020C	VMA16	P23968	213 aa		4.16	□□□□□ -1.74
RPN4	YDL020C	COQ3	P27680	312 aa		4.16	□□□□□ -1.74
RPN4	YDL020C	YBR225W	P38321	900 aa		4.16	□□□□□ -1.74
RPN4	YDL020C	DIA4	P38705	446 aa	Predicted RBP	4.16	□□□□□ -1.74
RPN4	YDL020C	UIP3	P39547	235 aa		4.16	□□□□□ -1.74
RPN4	YDL020C	TPA1	P40032	644 aa	Known RBP	4.16	□□□□□ -1.74
RPN4	YDL020C	RIM13	Q03792	727 aa		4.16	□□□□□ -1.74
RPN4	YDL020C	SEG1	Q04279	960 aa		4.16	□□□□□ -1.74
RPN4	YDL020C	PIG1	Q06216	648 aa		4.16	□□□□□ -1.74
RPN4	YDL020C	INP53	Q12271	1107 aa		4.16	□□□□□ -1.74
RPN4	YDL020C	RAP1	P11938	827 aa		4.15	□□□□□ -1.74
RPN4	YDL020C	TKL1	P23254	680 aa	Known RBP	4.15	□□□□□ -1.74
RPN4	YDL020C	PXL1	P36166	706 aa		4.15	□□□□□ -1.74
RPN4	YDL020C	MRX6	P48564	524 aa		4.15	□□□□□ -1.74
RPN4	YDL020C	LCL3	P53153	274 aa		4.15	□□□□□ -1.74
RPN4	YDL020C	TIM10	P87108	93 aa		4.15	□□□□□ -1.74
RPN4	YDL020C	YML037C	Q03703	340 aa		4.15	□□□□□ -1.74
RPN4	YDL020C	ARP9	Q05123	467 aa		4.15	□□□□□ -1.74
RPN4	YDL020C	YOL159C	Q08300	171 aa		4.15	□□□□□ -1.74
RPN4	YDL020C	SPE4	Q12455	300 aa		4.15	□□□□□ -1.74
RPN4	YDL020C	GCN4	P03069	281 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	SNU114	P36048	1008 aa	Known RBP	4.14	□□□□□ -1.75
RPN4	YDL020C	MNN2	P38069	597 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	NOC2	P39744	710 aa	Known RBP	4.14	□□□□□ -1.75
RPN4	YDL020C	DIA3	P52290	468 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	STR3	P53101	465 aa	Known RBP	4.14	□□□□□ -1.75
RPN4	YDL020C	NNF2	P53253	936 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	ARE2	P53629	642 aa	Known RBP	4.14	□□□□□ -1.75
RPN4	YDL020C	VPS75	P53853	264 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	ERG13	P54839	491 aa	Known RBP	4.14	□□□□□ -1.75
RPN4	YDL020C	MFB1	Q04922	465 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	CTI6	Q08923	506 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	YPL272C	Q08984	517 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	RCN2	Q12044	265 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	GAL4	P04386	881 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	CDC31	P06704	161 aa	Known RBP	4.14	□□□□□ -1.75
RPN4	YDL020C	ARD1	P07347	238 aa	Predicted RBP	4.14	□□□□□ -1.75
RPN4	YDL020C	STE50	P25344	346 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	ADH7	P25377	361 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	PEP3	P27801	918 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	SAC1	P32368	623 aa	Known RBP	4.14	□□□□□ -1.75
RPN4	YDL020C	NPR2	P39923	615 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	SMC3	P47037	1230 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	GLO1	P50107	326 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	EAF7	P53911	425 aa	Known RBP	4.14	□□□□□ -1.75
RPN4	YDL020C	BUD22	Q04347	519 aa	Known RBP	4.14	□□□□□ -1.75
RPN4	YDL020C	TDA9	Q04545	1251 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	FRE3	Q08905	711 aa		4.14	□□□□□ -1.75
RPN4	YDL020C	SPE2	P21182	396 aa		4.13	□□□□□ -1.75
RPN4	YDL020C	CNA1	P23287	553 aa		4.13	□□□□□ -1.75
RPN4	YDL020C	YIH1	P25637	258 aa		4.13	□□□□□ -1.75
RPN4	YDL020C	YKL050C	P35736	922 aa		4.13	□□□□□ -1.75
RPN4	YDL020C	JNM1	P36224	373 aa		4.13	□□□□□ -1.75
RPN4	YDL020C	VPS41	P38959	992 aa		4.13	□□□□□ -1.75
RPN4	YDL020C	ULP2	P40537	1034 aa	Predicted RBP	4.13	□□□□□ -1.75
RPN4	YDL020C	UBP8	P50102	471 aa		4.13	□□□□□ -1.75
RPN4	YDL020C	YTP1	P53584	459 aa		4.13	□□□□□ -1.75
RPN4	YDL020C	COP1	P53622	1201 aa	Known RBP	4.13	□□□□□ -1.75
RPN4	YDL020C	TAH18	Q12181	623 aa		4.13	□□□□□ -1.75
RPN4	YDL020C	CRC1	Q12289	327 aa		4.13	□□□□□ -1.75
RPN4	YDL020C	RRI1	Q12468	440 aa		4.13	□□□□□ -1.75
RPN4	YDL020C	CBS1	P14066	229 aa		4.12	□□□□□ -1.75
RPN4	YDL020C	AFG3	P39925	761 aa		4.12	□□□□□ -1.75
RPN4	YDL020C	RGI2	P40188	164 aa		4.12	□□□□□ -1.75
RPN4	YDL020C	XBP1	P40489	647 aa		4.12	□□□□□ -1.75
RPN4	YDL020C	ASI1	P54074	624 aa		4.12	□□□□□ -1.75
RPN4	YDL020C	ZDS2	P54786	942 aa		4.12	□□□□□ -1.75
RPN4	YDL020C	RPT6	Q01939	405 aa	Known RBP	4.12	□□□□□ -1.75
RPN4	YDL020C	MAK10	Q02197	733 aa		4.12	□□□□□ -1.75
RPN4	YDL020C	YMR178W	Q03219	274 aa	Known RBP	4.12	□□□□□ -1.75
RPN4	YDL020C	SWF1	Q04629	336 aa		4.12	□□□□□ -1.75
RPN4	YDL020C	YEH1	Q07804	573 aa		4.12	□□□□□ -1.75
RPN4	YDL020C	APL4	Q12028	832 aa		4.12	□□□□□ -1.75
RPN4	YDL020C	YAP1	P19880	650 aa	Known RBP	4.11	□□□□□ -1.75
RPN4	YDL020C	CLB2	P24869	491 aa		4.11	□□□□□ -1.75
RPN4	YDL020C	LCB1	P25045	558 aa	Known RBP	4.11	□□□□□ -1.75
RPN4	YDL020C	ELO1	P39540	310 aa		4.11	□□□□□ -1.75
RPN4	YDL020C	YIL024C	P40543	189 aa		4.11	□□□□□ -1.75
RPN4	YDL020C	IRC6	P43615	237 aa		4.11	□□□□□ -1.75
RPN4	YDL020C	SRB7	P47822	140 aa		4.11	□□□□□ -1.75
RPN4	YDL020C	LUC7	Q07508	261 aa	Predicted RBP	4.11	□□□□□ -1.75
RPN4	YDL020C	LEU9	Q12166	604 aa	Known RBP	4.11	□□□□□ -1.75
RPN4	YDL020C	KRS1	P15180	591 aa	Known RBP	4.1	□□□□□ -1.75
RPN4	YDL020C	REG2	P38232	338 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 67.4 ms