RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 GNAT2P19087 354 aa14.93□□□□□ -0.02
SOX2-OT-247ENST00000628347 CYP2C19P33261 490 aa14.93□□□□□ -0.02
SOX2-OT-247ENST00000628347 LRRFIP1Q32MZ4 808 aaKnown RBP14.93□□□□□ -0.02
SOX2-OT-247ENST00000628347 TRPV1Q8NER1 839 aa14.93□□□□□ -0.02
SOX2-OT-247ENST00000628347 SLC5A4Q9NY91 659 aa14.93□□□□□ -0.02
SOX2-OT-247ENST00000628347 COL11A1P12107 1806 aaPredicted RBP14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 GPAA1O43292 621 aa14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 COBLO75128 1261 aa14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 RASA1P20936 1047 aa14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 TMEM132BQ14DG7 1078 aa14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 TSHZ3Q63HK5 1081 aa14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 NCAPG2Q86XI2 1143 aa14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 EPB41L4AQ9HCS5 686 aaPredicted RBP14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 NYAP2Q9P242 653 aa14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 PPP1R9AQ9ULJ8 1098 aa14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 ZMYND8Q9ULU4 1186 aaPredicted RBP14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 PCDHB15Q9Y5E8 787 aa14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 ZNFX1Q9P2E3 1918 aaKnown RBP14.92□□□□□ -0.02
SOX2-OT-247ENST00000628347 ERC2O15083 957 aa14.91□□□□□ -0.02
SOX2-OT-247ENST00000628347 COPB2P35606 906 aa14.91□□□□□ -0.02
SOX2-OT-247ENST00000628347 PLS1Q14651 629 aa14.91□□□□□ -0.02
SOX2-OT-247ENST00000628347 LRRC26Q2I0M4 334 aa14.91□□□□□ -0.02
SOX2-OT-247ENST00000628347 RIOX2Q8IUF8 465 aa14.91□□□□□ -0.02
SOX2-OT-247ENST00000628347 REPS2Q8NFH8 660 aa14.91□□□□□ -0.02
SOX2-OT-247ENST00000628347 PI4K2BQ8TCG2 481 aa14.91□□□□□ -0.02
SOX2-OT-247ENST00000628347 MKNK2Q9HBH9 465 aa14.91□□□□□ -0.02
SOX2-OT-247ENST00000628347 IGKV6D-41A0A0C4DH26 115 aa14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 M0R2C6 588 aa14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 DNM1LO00429 736 aa14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 VWA5AO00534 786 aa14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 FCER1AP12319 257 aa14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 CNGA1P29973 690 aa14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 MAML3Q96JK9 1138 aa14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 ZNF287Q9HBT7 754 aa14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 FBXO28Q9NVF7 368 aa14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 NRBP1Q9UHY1 535 aa14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 ZNF214Q9UL59 606 aaPredicted RBP14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 SYNPO2Q9UMS6 1093 aa14.9□□□□□ -0.02
SOX2-OT-247ENST00000628347 DNAH12Q6ZR08 3092 aa14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 MINDY4BA8MYZ0 360 aa14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 PATL2C9JE40 543 aaKnown RBP14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 SEPT4O43236 478 aa14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 SYN1P17600 705 aa14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 MAGEA10P43363 369 aaPredicted RBP14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 TDO2P48775 406 aa14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 FAM83BQ5T0W9 1011 aa14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 IFNL3Q8IZI9 196 aa14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 MKL1Q969V6 931 aa14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 DIS3Q9Y2L1 958 aaKnown RBP14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 SALL3Q9BXA9 1300 aa14.89□□□□□ -0.03
SOX2-OT-247ENST00000628347 PLIN4Q96Q06 1357 aa14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 MYH4Q9Y623 1939 aa14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 F5H6K3 240 aa14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 SOX1O00570 391 aaPredicted RBP14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 STAT3P40763 770 aa14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 RRP1P56182 461 aaKnown RBP14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 KLRC3Q07444 240 aa14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 ZMYM1Q5SVZ6 1142 aa14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 GPR153Q6NV75 609 aa14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 ARRDC4Q8NCT1 418 aa14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 MMP19Q99542 508 aa14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 SLF1Q9BQI6 1058 aa14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 SENP6Q9GZR1 1112 aaPredicted RBP14.88□□□□□ -0.03
SOX2-OT-247ENST00000628347 PLXNA1Q9UIW2 1896 aa14.87□□□□□ -0.03
SOX2-OT-247ENST00000628347 NDUFB10O96000 172 aa14.87□□□□□ -0.03
SOX2-OT-247ENST00000628347 ZNF792Q3KQV3 632 aa14.87□□□□□ -0.03
SOX2-OT-247ENST00000628347 LRIT3Q3SXY7 679 aa14.87□□□□□ -0.03
SOX2-OT-247ENST00000628347 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
SOX2-OT-247ENST00000628347 ZNF444Q8N0Y2 327 aaPredicted RBP14.87□□□□□ -0.03
SOX2-OT-247ENST00000628347 OTUD7AQ8TE49 926 aaPredicted RBP14.87□□□□□ -0.03
SOX2-OT-247ENST00000628347 NACAP1Q9BZK3 213 aa14.87□□□□□ -0.03
SOX2-OT-247ENST00000628347 ATP2A1O14983 1001 aa14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 APPP05067 770 aa14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 MX1P20591 662 aa14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 KCTD2Q14681 263 aa14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 TDHQ8IZJ6 230 aa14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 PRPF38AQ8NAV1 312 aaKnown RBP14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 NEDD1Q8NHV4 660 aa14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 SEC62Q99442 399 aaKnown RBP14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 TINF2Q9BSI4 451 aa14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 FSD1Q9BTV5 496 aa14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 TEX13BQ9BXU2 312 aa14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 MTMR4Q9NYA4 1195 aa14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 CLIP2Q9UDT6 1046 aa14.86□□□□□ -0.03
SOX2-OT-247ENST00000628347 KBTBD13C9JR72 458 aa14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 RAD21O60216 631 aa14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 TTLL1O95922 423 aa14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 PDE4BQ07343 736 aa14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 PRAMEF19Q5SWL8 479 aa14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 GJC2Q5T442 439 aaPredicted RBP14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 STK11IPQ8N1F8 1099 aa14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 MSL3Q8N5Y2 521 aaKnown RBP14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 GMCL1P1Q8NEA9 526 aa14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 CEP95Q96GE4 821 aa14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 LRCH3Q96II8 777 aa14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 NUP88Q99567 741 aaPredicted RBP14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 UBE2OQ9C0C9 1292 aaKnown RBP14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 SMCHD1A6NHR9 2005 aa14.85□□□□□ -0.03
SOX2-OT-247ENST00000628347 PRDM1O75626 825 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms