RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 CTNND2Q9UQB3 1225 aa15.59■□□□□ 0.09
CIITA-213ENST00000618327 MMP1P03956 469 aa15.58■□□□□ 0.09
CIITA-213ENST00000618327 UBXN1Q04323 297 aa15.58■□□□□ 0.09
CIITA-213ENST00000618327 PTGDRQ13258 359 aa15.58■□□□□ 0.09
CIITA-213ENST00000618327 SPICE1Q8N0Z3 855 aa15.58■□□□□ 0.09
CIITA-213ENST00000618327 STK24Q9Y6E0 443 aa15.58■□□□□ 0.09
CIITA-213ENST00000618327 HS1BP3Q53T59 392 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 EAPPQ56P03 285 aaPredicted RBP15.58■□□□□ 0.08
CIITA-213ENST00000618327 USP17L2Q6R6M4 530 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 AIFM3Q96NN9 605 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 CACNB3P54284 484 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 FAM193AP78312 1265 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 CTR9Q6PD62 1173 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 KCTD1Q719H9 257 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 SULF1Q8IWU6 871 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 CAMTA1Q9Y6Y1 1673 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 A0A1W2PQ27 194 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 A0A1W2PQ64 194 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 A0A1W2PQD8 194 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 PTGS1P23219 599 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 PNOCQ13519 176 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 MTA3Q9BTC8 594 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 MRPL11Q9Y3B7 192 aaKnown RBP15.58■□□□□ 0.08
CIITA-213ENST00000618327 ATP6V0A2Q9Y487 856 aa15.58■□□□□ 0.08
CIITA-213ENST00000618327 CHRNA5P30532 468 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 AMNQ9BXJ7 453 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 PCDHA4Q9UN74 947 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 OR52Z1P0C646 297 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 TRAPPC10P48553 1259 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 RESTQ13127 1097 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 NWD1Q149M9 1564 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 NDUFA8P51970 172 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 NR5A1Q13285 461 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 STOX1Q6ZVD7 989 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 DCPSQ96C86 337 aaKnown RBP15.57■□□□□ 0.08
CIITA-213ENST00000618327 ALDH8A1Q9H2A2 487 aaPredicted RBP15.57■□□□□ 0.08
CIITA-213ENST00000618327 DNM3Q9UQ16 869 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 MYO3BQ8WXR4 1341 aa15.57■□□□□ 0.08
CIITA-213ENST00000618327 IRX3P78415 501 aaPredicted RBP15.56■□□□□ 0.08
CIITA-213ENST00000618327 RCOR1Q9UKL0 485 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 TRAF5O00463 557 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 ALAS1P13196 640 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 PIGSQ96S52 555 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 FTOQ9C0B1 505 aaKnown RBP eCLIP15.56■□□□□ 0.08
CIITA-213ENST00000618327 TMX1Q9H3N1 280 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.56■□□□□ 0.08
CIITA-213ENST00000618327 CALCOCO1Q9P1Z2 691 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 CASP7P55210 303 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 NOLC1Q14978 699 aaKnown RBP eCLIP15.56■□□□□ 0.08
CIITA-213ENST00000618327 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
CIITA-213ENST00000618327 RASGRP4Q8TDF6 673 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 GBP3Q9H0R5 595 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 IL25Q9H293 177 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 BLZF1Q9H2G9 400 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 PIK3C2AO00443 1686 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 GCOM1H8Y6P7 765 aaPredicted RBP15.56■□□□□ 0.08
CIITA-213ENST00000618327 DDX39AO00148 427 aaKnown RBP15.56■□□□□ 0.08
CIITA-213ENST00000618327 PPP6R2O75170 966 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 POLR2MP0CAP2 368 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 RPL13P26373 211 aaKnown RBP15.56■□□□□ 0.08
CIITA-213ENST00000618327 CYLC1P35663 651 aaPredicted RBP15.56■□□□□ 0.08
CIITA-213ENST00000618327 SLC16A2P36021 539 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 TECP42680 631 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 PAK1Q13153 545 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 DYMQ7RTS9 669 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 FBXO33Q7Z6M2 555 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 ENAHQ8N8S7 591 aaPredicted RBP15.56■□□□□ 0.08
CIITA-213ENST00000618327 CRACR2AQ9BSW2 395 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 LY9Q9HBG7 655 aa15.56■□□□□ 0.08
CIITA-213ENST00000618327 SYNRGQ9UMZ2 1314 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 FLOT1O75955 427 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 SLC10A5Q5PT55 438 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 LINC00301Q8NCQ3 95 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 SLC44A5Q8NCS7 719 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 TCHPQ9BT92 498 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 NT5C3AQ9H0P0 336 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 PCDHA12Q9UN75 941 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 NFE2L3Q9Y4A8 694 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 ECM2O94769 699 aaPredicted RBP15.55■□□□□ 0.08
CIITA-213ENST00000618327 PLEKHA8P1O95397 391 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 PRR16Q569H4 304 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 TAX1BP1Q86VP1 789 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 TDRD3Q9H7E2 651 aaKnown RBP15.55■□□□□ 0.08
CIITA-213ENST00000618327 CGNQ9P2M7 1197 aaKnown RBP15.55■□□□□ 0.08
CIITA-213ENST00000618327 SSR1P43307 286 aaKnown RBP15.55■□□□□ 0.08
CIITA-213ENST00000618327 GNG11P61952 73 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 KRBA2Q6ZNG9 492 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 ARHGEF35A5YM69 484 aa15.55■□□□□ 0.08
CIITA-213ENST00000618327 HERC4Q5GLZ8 1057 aaPredicted RBP15.55■□□□□ 0.08
CIITA-213ENST00000618327 CCDC172P0C7W6 258 aa15.54■□□□□ 0.08
CIITA-213ENST00000618327 BMP3P12645 472 aa15.54■□□□□ 0.08
CIITA-213ENST00000618327 GYS1P13807 737 aa15.54■□□□□ 0.08
CIITA-213ENST00000618327 FANCCQ00597 558 aa15.54■□□□□ 0.08
CIITA-213ENST00000618327 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.54■□□□□ 0.08
CIITA-213ENST00000618327 CSGALNACT2Q8N6G5 542 aa15.54■□□□□ 0.08
CIITA-213ENST00000618327 SUGT1Q9Y2Z0 365 aa15.54■□□□□ 0.08
CIITA-213ENST00000618327 TMTC3Q6ZXV5 915 aa15.54■□□□□ 0.08
CIITA-213ENST00000618327 ZNF277Q9NRM2 450 aaPredicted RBP15.54■□□□□ 0.08
CIITA-213ENST00000618327 hCG_1984214I3L0E3 225 aa15.54■□□□□ 0.08
CIITA-213ENST00000618327 FOSP01100 380 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms