RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 ATL3Q6DD88 541 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 SAMD7Q7Z3H4 446 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 FAM151AQ8WW52 585 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 GPKOWQ92917 476 aaPredicted RBP eCLIP12.82□□□□□ -0.36
CTCFL-212ENST00000539382 CCDC17Q96LX7 622 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 UBA5Q9GZZ9 404 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 POLR3EQ9NVU0 708 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 GJA3Q9Y6H8 435 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 SNHG28P0DPA3 235 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 NASPP49321 788 aaPredicted RBP12.82□□□□□ -0.36
CTCFL-212ENST00000539382 ZNF445P59923 1031 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 ATP2B2Q01814 1243 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 TMOD2Q9NZR1 351 aa12.82□□□□□ -0.36
CTCFL-212ENST00000539382 COL2A1P02458 1487 aaPredicted RBP12.81□□□□□ -0.36
CTCFL-212ENST00000539382 PARP1P09874 1014 aaKnown RBP12.81□□□□□ -0.36
CTCFL-212ENST00000539382 EEF2P13639 858 aaKnown RBP12.81□□□□□ -0.36
CTCFL-212ENST00000539382 GNL2Q13823 731 aaKnown RBP12.81□□□□□ -0.36
CTCFL-212ENST00000539382 SF3A1Q15459 793 aaKnown RBP12.81□□□□□ -0.36
CTCFL-212ENST00000539382 ANO1Q5XXA6 986 aa12.81□□□□□ -0.36
CTCFL-212ENST00000539382 ARHGAP27Q6ZUM4 889 aa12.81□□□□□ -0.36
CTCFL-212ENST00000539382 MICALL2Q8IY33 904 aa12.81□□□□□ -0.36
CTCFL-212ENST00000539382 FOXP1Q9H334 677 aaPredicted RBP12.81□□□□□ -0.36
CTCFL-212ENST00000539382 PCDHA7Q9UN72 937 aa12.81□□□□□ -0.36
CTCFL-212ENST00000539382 WNT7AO00755 349 aa12.81□□□□□ -0.36
CTCFL-212ENST00000539382 NR1I2O75469 434 aa12.81□□□□□ -0.36
CTCFL-212ENST00000539382 PTPAQ15257 358 aa12.81□□□□□ -0.36
CTCFL-212ENST00000539382 MIGA2Q7L4E1 593 aa12.81□□□□□ -0.36
CTCFL-212ENST00000539382 FAM43AQ8N2R8 423 aa12.81□□□□□ -0.36
CTCFL-212ENST00000539382 TNFRSF25Q93038 417 aa12.81□□□□□ -0.36
CTCFL-212ENST00000539382 GOLPH3LQ9H4A5 285 aa12.81□□□□□ -0.36
CTCFL-212ENST00000539382 GH2P01242 217 aa12.8□□□□□ -0.36
CTCFL-212ENST00000539382 ME1P48163 572 aa12.8□□□□□ -0.36
CTCFL-212ENST00000539382 GNAQP50148 359 aa12.8□□□□□ -0.36
CTCFL-212ENST00000539382 SAFBQ15424 915 aaKnown RBP eCLIP12.8□□□□□ -0.36
CTCFL-212ENST00000539382 TBC1D10BQ4KMP7 808 aaPredicted RBP12.8□□□□□ -0.36
CTCFL-212ENST00000539382 FKBP1CQ5VVH2 108 aa12.8□□□□□ -0.36
CTCFL-212ENST00000539382 WWC2Q6AWC2 1192 aa12.8□□□□□ -0.36
CTCFL-212ENST00000539382 TTBK2Q6IQ55 1244 aa12.8□□□□□ -0.36
CTCFL-212ENST00000539382 SYT17Q9BSW7 474 aa12.8□□□□□ -0.36
CTCFL-212ENST00000539382 SPZ1Q9BXG8 430 aa12.8□□□□□ -0.36
CTCFL-212ENST00000539382 VAT1LQ9HCJ6 419 aa12.8□□□□□ -0.36
CTCFL-212ENST00000539382 CABP5Q9NP86 173 aa12.8□□□□□ -0.36
CTCFL-212ENST00000539382 DACT1Q9NYF0 836 aa12.8□□□□□ -0.36
CTCFL-212ENST00000539382 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.8□□□□□ -0.36
CTCFL-212ENST00000539382 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
CTCFL-212ENST00000539382 MARCKSP29966 332 aaPredicted RBP12.79□□□□□ -0.36
CTCFL-212ENST00000539382 ABCB5Q2M3G0 1257 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 TRIM34Q9BYJ4 488 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.79□□□□□ -0.36
CTCFL-212ENST00000539382 GPCPD1Q9NPB8 672 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 GOLGA6L4A6NEF3 574 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 SPTLC2O15270 562 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 YEATS4O95619 227 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 RPS12P25398 132 aaKnown RBP12.79□□□□□ -0.36
CTCFL-212ENST00000539382 ZNF543Q08ER8 600 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 SLC39A14Q15043 492 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 STK38Q15208 465 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 KCTD1Q719H9 257 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 FAM83AQ86UY5 434 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 HOMER1Q86YM7 354 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 BICD2Q8TD16 824 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 DPF2Q92785 391 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 KANSL2Q9H9L4 492 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 PCDHB6Q9Y5E3 794 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 MYH4Q9Y623 1939 aa12.79□□□□□ -0.36
CTCFL-212ENST00000539382 A0A1W2PRG0 241 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 YBX3P16989 372 aaKnown RBP eCLIP12.78□□□□□ -0.362e-8■■■□□ 15.1
CTCFL-212ENST00000539382 XBP1P17861 261 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 KRT2P35908 639 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 RASA3Q14644 834 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 AXDND1Q5T1B0 1012 aaPredicted RBP12.78□□□□□ -0.36
CTCFL-212ENST00000539382 CCDC183Q5T5S1 534 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 TMEM179Q6ZVK1 233 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 MKL1Q969V6 931 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 PIGSQ96S52 555 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 RIOX1Q9H6W3 641 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 NYAP2Q9P242 653 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 HERC5Q9UII4 1024 aaKnown RBP12.78□□□□□ -0.36
CTCFL-212ENST00000539382 MRVI1Q9Y6F6 885 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 STXBP3O00186 592 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 MYO1BO43795 1136 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 ATP2B1P20020 1258 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 SLC16A2P36021 539 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 NLRP5P59047 1200 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 ICA1Q05084 483 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 SNW1Q13573 536 aaKnown RBP12.78□□□□□ -0.36
CTCFL-212ENST00000539382 CAMK4Q16566 473 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 HEATR3Q7Z4Q2 680 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 CCAR1Q8IX12 1150 aaKnown RBP12.78□□□□□ -0.36
CTCFL-212ENST00000539382 RASGRP4Q8TDF6 673 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 TEPSINQ96N21 525 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 LZTS2Q9BRK4 669 aa12.78□□□□□ -0.36
CTCFL-212ENST00000539382 ADALQ6DHV7 355 aa12.77□□□□□ -0.36
CTCFL-212ENST00000539382 LRSAM1Q6UWE0 723 aa12.77□□□□□ -0.36
CTCFL-212ENST00000539382 BARHL2Q9NY43 387 aa12.77□□□□□ -0.36
CTCFL-212ENST00000539382 M0R2N6 131 aa12.77□□□□□ -0.37
CTCFL-212ENST00000539382 LMNB1P20700 586 aa12.77□□□□□ -0.37
CTCFL-212ENST00000539382 ECE1P42892 770 aa12.77□□□□□ -0.37
CTCFL-212ENST00000539382 ASPRV1Q53RT3 343 aa12.77□□□□□ -0.37
CTCFL-212ENST00000539382 ENGASEQ8NFI3 743 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms