RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 MTMR4Q9NYA4 1195 aa11.13□□□□□ -0.63
DDX41-209ENST00000508279 STX8Q9UNK0 236 aa11.13□□□□□ -0.63
DDX41-209ENST00000508279 IGKV6D-41A0A0C4DH26 115 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 F5H6K3 240 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 NMT2O60551 498 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 NDUFB10O96000 172 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 KLRC3Q07444 240 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 ALX1Q15699 326 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 LBX2Q6XYB7 198 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 NCAPG2Q86XI2 1143 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 NEDD1Q8NHV4 660 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 PXYLP1Q8TE99 480 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 SOCS4Q8WXH5 440 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 GJD2Q9UKL4 321 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 CTDP1Q9Y5B0 961 aaPredicted RBP11.12□□□□□ -0.63
DDX41-209ENST00000508279 TACC3Q9Y6A5 838 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 TNRC18O15417 2968 aaPredicted RBP11.12□□□□□ -0.63
DDX41-209ENST00000508279 A0A0G2JMZ2 1700 aa11.12□□□□□ -0.63
DDX41-209ENST00000508279 HMGCRP04035 888 aa11.11□□□□□ -0.63
DDX41-209ENST00000508279 ZKSCAN1P17029 563 aaPredicted RBP11.11□□□□□ -0.63
DDX41-209ENST00000508279 RGS2P41220 211 aa11.11□□□□□ -0.63
DDX41-209ENST00000508279 TRIM32Q13049 653 aa11.11□□□□□ -0.63
DDX41-209ENST00000508279 IKQ13123 557 aaPredicted RBP11.11□□□□□ -0.63
DDX41-209ENST00000508279 SLFN13Q68D06 897 aa11.11□□□□□ -0.63
DDX41-209ENST00000508279 MFSD6Q6ZSS7 791 aa11.11□□□□□ -0.63
DDX41-209ENST00000508279 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
DDX41-209ENST00000508279 TRIB2Q92519 343 aa11.11□□□□□ -0.63
DDX41-209ENST00000508279 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
DDX41-209ENST00000508279 MOV10L1Q9BXT6 1211 aaKnown RBP11.11□□□□□ -0.63
DDX41-209ENST00000508279 SPATC1LQ9H0A9 340 aa11.11□□□□□ -0.63
DDX41-209ENST00000508279 ANAPC4Q9UJX5 808 aa11.11□□□□□ -0.63
DDX41-209ENST00000508279 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
DDX41-209ENST00000508279 LAMA4Q16363 1823 aa11.11□□□□□ -0.63
DDX41-209ENST00000508279 PDE4DIPQ5VU43 2346 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 ZNF213O14771 459 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 ERCC3P19447 782 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 PTPREP23469 700 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 MAP2K5Q13163 448 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 TMEM132BQ14DG7 1078 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 CCL14Q16627 93 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 MORN1Q5T089 497 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 DPP9Q86TI2 863 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 SKAP1Q86WV1 359 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 TBC1D10CQ8IV04 446 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 MB21D1Q8N884 522 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 DEFB118Q96PH6 123 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 SLF1Q9BQI6 1058 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 PPP1R9AQ9ULJ8 1098 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 PLIN4Q96Q06 1357 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 BRCA2P51587 3418 aa11.1□□□□□ -0.63
DDX41-209ENST00000508279 PLXNA1Q9UIW2 1896 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 SLC15A5A6NIM6 579 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 VWA5AO00534 786 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 ORC4O43929 436 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 TFRCP02786 760 aaKnown RBP11.09□□□□□ -0.63
DDX41-209ENST00000508279 BMP3P12645 472 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 MCCP23508 829 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 AKNAD1Q5T1N1 836 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 CPXCR1Q8N123 301 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 NKX2-3Q8TAU0 364 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 RUFY2Q8WXA3 655 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 MKL1Q969V6 931 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 APBA2Q99767 749 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 ZKSCAN3Q9BRR0 538 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDX41-209ENST00000508279 IL25Q9H293 177 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 HMX1Q9NP08 348 aaPredicted RBP11.09□□□□□ -0.63
DDX41-209ENST00000508279 IL17RBQ9NRM6 502 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 ZMYM6O95789 1325 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 NEDD4P46934 1319 aa11.09□□□□□ -0.63
DDX41-209ENST00000508279 TMEM232C9JQI7 657 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 ZBED4O75132 1171 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 NEFLP07196 543 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 GJB1P08034 283 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
DDX41-209ENST00000508279 ADORA2AP29274 412 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 STAT3P40763 770 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 SLC1A4P43007 532 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 GJA8P48165 433 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 GRB14Q14449 540 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 IMMTQ16891 758 aaKnown RBP11.08□□□□□ -0.64
DDX41-209ENST00000508279 PPP4R3BQ5MIZ7 849 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 KCTD1Q719H9 257 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 CENPQQ7L2Z9 268 aaPredicted RBP11.08□□□□□ -0.64
DDX41-209ENST00000508279 RASGRP2Q7LDG7 609 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 PRPF38AQ8NAV1 312 aaKnown RBP11.08□□□□□ -0.64
DDX41-209ENST00000508279 GMCL1P1Q8NEA9 526 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 NPLOC4Q8TAT6 608 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 U2AF1L4Q8WU68 220 aaKnown RBP11.08□□□□□ -0.64
DDX41-209ENST00000508279 STAG1Q8WVM7 1258 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 SHISA4Q96DD7 197 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 CCDC136Q96JN2 1154 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 DSCC1Q9BVC3 393 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 NBPF3Q9H094 633 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 RNF41Q9H4P4 317 aaPredicted RBP11.08□□□□□ -0.64
DDX41-209ENST00000508279 FEM1BQ9UK73 627 aa11.08□□□□□ -0.64
DDX41-209ENST00000508279 B4E1Z4 1266 aa11.07□□□□□ -0.64
DDX41-209ENST00000508279 SGPL1O95470 568 aa11.07□□□□□ -0.64
DDX41-209ENST00000508279 SLC25A27O95847 323 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms