RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 GPR153Q6NV75 609 aa21.4■■□□□ 1.02
SSB-206ENST00000461708 OSBP2Q969R2 916 aa21.4■■□□□ 1.02
SSB-206ENST00000461708 COL11A1P12107 1806 aaPredicted RBP21.39■■□□□ 1.02
SSB-206ENST00000461708 TTC41PQ6P2S7 1318 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 COBLO75128 1261 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 RASA1P20936 1047 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 COPB2P35606 906 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 MAGEA10P43363 369 aaPredicted RBP21.39■■□□□ 1.01
SSB-206ENST00000461708 TMEM132BQ14DG7 1078 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 LRRC26Q2I0M4 334 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 NCAPG2Q86XI2 1143 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 RIOX2Q8IUF8 465 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 ARRDC4Q8NCT1 418 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 NYAP2Q9P242 653 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 NRBP1Q9UHY1 535 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 PPP1R9AQ9ULJ8 1098 aa21.39■■□□□ 1.01
SSB-206ENST00000461708 VWA5AO00534 786 aa21.38■■□□□ 1.01
SSB-206ENST00000461708 SEPT4O43236 478 aa21.38■■□□□ 1.01
SSB-206ENST00000461708 MAML3Q96JK9 1138 aa21.38■■□□□ 1.01
SSB-206ENST00000461708 MKNK2Q9HBH9 465 aa21.38■■□□□ 1.01
SSB-206ENST00000461708 ZNF287Q9HBT7 754 aa21.38■■□□□ 1.01
SSB-206ENST00000461708 GPAA1O43292 621 aa21.37■■□□□ 1.01
SSB-206ENST00000461708 SYN1P17600 705 aa21.37■■□□□ 1.01
SSB-206ENST00000461708 LRIT3Q3SXY7 679 aa21.37■■□□□ 1.01
SSB-206ENST00000461708 FBXO28Q9NVF7 368 aa21.37■■□□□ 1.01
SSB-206ENST00000461708 SYNPO2Q9UMS6 1093 aa21.37■■□□□ 1.01
SSB-206ENST00000461708 DIS3Q9Y2L1 958 aaKnown RBP21.37■■□□□ 1.01
SSB-206ENST00000461708 SOX1O00570 391 aaPredicted RBP21.36■■□□□ 1.01
SSB-206ENST00000461708 ERC2O15083 957 aa21.36■■□□□ 1.01
SSB-206ENST00000461708 STAT3P40763 770 aa21.36■■□□□ 1.01
SSB-206ENST00000461708 REPS2Q8NFH8 660 aa21.36■■□□□ 1.01
SSB-206ENST00000461708 SENP6Q9GZR1 1112 aaPredicted RBP21.36■■□□□ 1.01
SSB-206ENST00000461708 ZNF214Q9UL59 606 aaPredicted RBP21.36■■□□□ 1.01
SSB-206ENST00000461708 IGKV6D-41A0A0C4DH26 115 aa21.35■■□□□ 1.01
SSB-206ENST00000461708 MINDY4BA8MYZ0 360 aa21.35■■□□□ 1.01
SSB-206ENST00000461708 PATL2C9JE40 543 aaKnown RBP21.35■■□□□ 1.01
SSB-206ENST00000461708 FAM83BQ5T0W9 1011 aa21.35■■□□□ 1.01
SSB-206ENST00000461708 TSHZ3Q63HK5 1081 aa21.35■■□□□ 1.01
SSB-206ENST00000461708 TDHQ8IZJ6 230 aa21.35■■□□□ 1.01
SSB-206ENST00000461708 MKL1Q969V6 931 aa21.35■■□□□ 1.01
SSB-206ENST00000461708 EPB41L4AQ9HCS5 686 aaPredicted RBP21.35■■□□□ 1.01
SSB-206ENST00000461708 PCDHB15Q9Y5E8 787 aa21.35■■□□□ 1.01
SSB-206ENST00000461708 F5H6K3 240 aa21.34■■□□□ 1.01
SSB-206ENST00000461708 TDO2P48775 406 aa21.34■■□□□ 1.01
SSB-206ENST00000461708 KLRC3Q07444 240 aa21.34■■□□□ 1.01
SSB-206ENST00000461708 KCTD2Q14681 263 aa21.34■■□□□ 1.01
SSB-206ENST00000461708 PI4K2BQ8TCG2 481 aa21.34■■□□□ 1.01
SSB-206ENST00000461708 MMP19Q99542 508 aa21.34■■□□□ 1.01
SSB-206ENST00000461708 SLF1Q9BQI6 1058 aa21.34■■□□□ 1.01
SSB-206ENST00000461708 UBE2OQ9C0C9 1292 aaKnown RBP21.34■■□□□ 1.01
SSB-206ENST00000461708 SMCHD1A6NHR9 2005 aa21.33■■□□□ 1.01
SSB-206ENST00000461708 PLXNA1Q9UIW2 1896 aa21.33■■□□□ 1.01
SSB-206ENST00000461708 PRPF38AQ8NAV1 312 aaKnown RBP21.33■■□□□ 1.01
SSB-206ENST00000461708 LRCH3Q96II8 777 aa21.33■■□□□ 1.01
SSB-206ENST00000461708 TEX13BQ9BXU2 312 aa21.33■■□□□ 1.01
SSB-206ENST00000461708 NACAP1Q9BZK3 213 aa21.33■■□□□ 1.01
SSB-206ENST00000461708 MYH4Q9Y623 1939 aa21.33■■□□□ 1
SSB-206ENST00000461708 KBTBD13C9JR72 458 aa21.32■■□□□ 1
SSB-206ENST00000461708 M0R2C6 588 aa21.32■■□□□ 1
SSB-206ENST00000461708 ATP2A1O14983 1001 aa21.32■■□□□ 1
SSB-206ENST00000461708 NDUFB10O96000 172 aa21.32■■□□□ 1
SSB-206ENST00000461708 APPP05067 770 aa21.32■■□□□ 1
SSB-206ENST00000461708 ZNF792Q3KQV3 632 aa21.32■■□□□ 1
SSB-206ENST00000461708 SAMD1Q6SPF0 538 aaPredicted RBP21.32■■□□□ 1
SSB-206ENST00000461708 IFNL3Q8IZI9 196 aa21.32■■□□□ 1
SSB-206ENST00000461708 ZNF444Q8N0Y2 327 aaPredicted RBP21.32■■□□□ 1
SSB-206ENST00000461708 COL6A3P12111 3177 aa21.31■■□□□ 1
SSB-206ENST00000461708 RAD21O60216 631 aa21.31■■□□□ 1
SSB-206ENST00000461708 SNX17Q15036 470 aa21.31■■□□□ 1
SSB-206ENST00000461708 GJC2Q5T442 439 aaPredicted RBP21.31■■□□□ 1
SSB-206ENST00000461708 MSL3Q8N5Y2 521 aaKnown RBP21.31■■□□□ 1
SSB-206ENST00000461708 TINF2Q9BSI4 451 aa21.31■■□□□ 1
SSB-206ENST00000461708 MTMR4Q9NYA4 1195 aa21.31■■□□□ 1
SSB-206ENST00000461708 LAMA2P24043 3122 aaKnown RBP21.31■■□□□ 1
SSB-206ENST00000461708 PLIN4Q96Q06 1357 aa21.31■■□□□ 1
SSB-206ENST00000461708 ZMYM1Q5SVZ6 1142 aa21.3■■□□□ 1
SSB-206ENST00000461708 PRAMEF19Q5SWL8 479 aa21.3■■□□□ 1
SSB-206ENST00000461708 C1orf53Q5VUE5 145 aa21.3■■□□□ 1
SSB-206ENST00000461708 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.3■■□□□ 1
SSB-206ENST00000461708 GMCL1P1Q8NEA9 526 aa21.3■■□□□ 1
SSB-206ENST00000461708 CLIP2Q9UDT6 1046 aa21.3■■□□□ 1
SSB-206ENST00000461708 TTLL1O95922 423 aa21.29■■□□□ 1
SSB-206ENST00000461708 PGK2P07205 417 aa21.29■■□□□ 1
SSB-206ENST00000461708 SLC3A2P08195 630 aaKnown RBP21.29■■□□□ 1
SSB-206ENST00000461708 MX1P20591 662 aa21.29■■□□□ 1
SSB-206ENST00000461708 RTP1P59025 263 aa21.29■■□□□ 1
SSB-206ENST00000461708 PDE4BQ07343 736 aa21.29■■□□□ 1
SSB-206ENST00000461708 SLC39A5Q6ZMH5 540 aa21.29■■□□□ 1
SSB-206ENST00000461708 NEDD1Q8NHV4 660 aa21.29■■□□□ 1
SSB-206ENST00000461708 NUP88Q99567 741 aaPredicted RBP21.29■■□□□ 1
SSB-206ENST00000461708 LBHD1Q9BQE6 289 aaPredicted RBP21.29■■□□□ 1
SSB-206ENST00000461708 ATN1P54259 1190 aaPredicted RBP21.28■■□□□ 1
SSB-206ENST00000461708 OAZ1P54368 228 aa21.28■■□□□ 1
SSB-206ENST00000461708 LRRC41Q15345 812 aa21.28■■□□□ 1
SSB-206ENST00000461708 TICAM2Q86XR7 235 aa21.28■■□□□ 1
SSB-206ENST00000461708 STK11IPQ8N1F8 1099 aa21.28■■□□□ 1
SSB-206ENST00000461708 OTUD7AQ8TE49 926 aaPredicted RBP21.28■■□□□ 1
SSB-206ENST00000461708 CEP95Q96GE4 821 aa21.28■■□□□ 1
SSB-206ENST00000461708 FSD1Q9BTV5 496 aa21.28■■□□□ 1
SSB-206ENST00000461708 PRKAG2Q9UGJ0 569 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms