RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 PLA2G4DQ86XP0 818 aa14.91□□□□□ -0.02
COL18A1-201ENST00000342220 RTKN2Q8IZC4 609 aa14.91□□□□□ -0.02
COL18A1-201ENST00000342220 OSBPL5Q9H0X9 879 aaPredicted RBP14.91□□□□□ -0.02
COL18A1-201ENST00000342220 IRS2Q9Y4H2 1338 aa14.91□□□□□ -0.02
COL18A1-201ENST00000342220 GH2P01242 217 aa14.91□□□□□ -0.02
COL18A1-201ENST00000342220 USH1GQ495M9 461 aa14.91□□□□□ -0.02
COL18A1-201ENST00000342220 SUPT20HQ8NEM7 779 aa14.91□□□□□ -0.02
COL18A1-201ENST00000342220 PCDHB6Q9Y5E3 794 aa14.91□□□□□ -0.02
COL18A1-201ENST00000342220 EGFRP00533 1210 aa14.9□□□□□ -0.02
COL18A1-201ENST00000342220 CHRM1P11229 460 aaPredicted RBP14.9□□□□□ -0.02
COL18A1-201ENST00000342220 PPP4CP60510 307 aa14.9□□□□□ -0.02
COL18A1-201ENST00000342220 PIGSQ96S52 555 aa14.9□□□□□ -0.02
COL18A1-201ENST00000342220 SOGA3Q5TF21 947 aa14.9□□□□□ -0.02
COL18A1-201ENST00000342220 RCSD1Q6JBY9 416 aa14.9□□□□□ -0.02
COL18A1-201ENST00000342220 MTFR1LQ9H019 292 aa14.9□□□□□ -0.02
COL18A1-201ENST00000342220 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.9□□□□□ -0.023e-7■■□□□ 13.2
COL18A1-201ENST00000342220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.9□□□□□ -0.026e-7■■■■□ 26.2
COL18A1-201ENST00000342220 LAMA4Q16363 1823 aa14.9□□□□□ -0.02
COL18A1-201ENST00000342220 DLK2Q6UY11 383 aa14.9□□□□□ -0.02
COL18A1-201ENST00000342220 FEZ1Q99689 392 aa14.9□□□□□ -0.02
COL18A1-201ENST00000342220 FAM205AQ6ZU69 1335 aa14.89□□□□□ -0.03
COL18A1-201ENST00000342220 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.89□□□□□ -0.03
COL18A1-201ENST00000342220 GOLPH3LQ9H4A5 285 aa14.89□□□□□ -0.03
COL18A1-201ENST00000342220 ANAPC4Q9UJX5 808 aa14.89□□□□□ -0.03
COL18A1-201ENST00000342220 CCDC194A0A1B0GVG4 234 aa14.89□□□□□ -0.03
COL18A1-201ENST00000342220 ADAMTS3O15072 1205 aa14.89□□□□□ -0.03
COL18A1-201ENST00000342220 MYO1BO43795 1136 aa14.89□□□□□ -0.03
COL18A1-201ENST00000342220 EARS2Q5JPH6 523 aaKnown RBP14.89□□□□□ -0.03
COL18A1-201ENST00000342220 C11orf57Q6ZUT1 292 aaPredicted RBP14.89□□□□□ -0.03
COL18A1-201ENST00000342220 TMTC3Q6ZXV5 915 aa14.89□□□□□ -0.03
COL18A1-201ENST00000342220 TICAM2Q86XR7 235 aa14.89□□□□□ -0.03
COL18A1-201ENST00000342220 NOSTRINQ8IVI9 506 aa14.89□□□□□ -0.03
COL18A1-201ENST00000342220 BIN2Q9UBW5 565 aaPredicted RBP14.89□□□□□ -0.03
COL18A1-201ENST00000342220 ASTN2O75129 1339 aaPredicted RBP14.89□□□□□ -0.03
COL18A1-201ENST00000342220 SLC1A4P43007 532 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 NDUFA8P51970 172 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 GRIN1Q05586 938 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 CIAPIN1Q6FI81 312 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 C4AP0C0L4 1744 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 VWA3AA6NCI4 1184 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 ORC4O43929 436 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 KRT2P35908 639 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 CCDC144BQ3MJ40 725 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 SBK1Q52WX2 424 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 SALL1Q9NSC2 1324 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 SCG2P13521 617 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 AFMP43652 599 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 C16orf45Q96MC5 204 aaPredicted RBP14.88□□□□□ -0.03
COL18A1-201ENST00000342220 RCOR1Q9UKL0 485 aa14.88□□□□□ -0.03
COL18A1-201ENST00000342220 CALM1P0DP23 149 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 CALM2P0DP24 149 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 CALM3P0DP25 149 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 ICA1Q05084 483 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 INF2Q27J81 1249 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 LETM2Q2VYF4 491 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 CC2D2BQ6DHV5 1058 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 ZNRF3Q9ULT6 936 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 UBR3Q6ZT12 1888 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 BECN2A8MW95 431 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 MMP1P03956 469 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 KCNA3P22001 575 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 TNNI2P48788 182 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 RSBN1LQ6PCB5 846 aaPredicted RBP14.87□□□□□ -0.03
COL18A1-201ENST00000342220 CACTINQ8WUQ7 758 aaKnown RBP14.87□□□□□ -0.03
COL18A1-201ENST00000342220 OGFRQ9NZT2 677 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 FAM198AQ9UFP1 575 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 PCNTO95613 3336 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 EEF2P13639 858 aaKnown RBP14.87□□□□□ -0.03
COL18A1-201ENST00000342220 CAPN2P17655 700 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 IQCB1Q15051 598 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 C16orf86Q6ZW13 317 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 GRAMD1CQ8IYS0 662 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 LINC00301Q8NCQ3 95 aa14.87□□□□□ -0.03
COL18A1-201ENST00000342220 ABCB5Q2M3G0 1257 aa14.86□□□□□ -0.03
COL18A1-201ENST00000342220 C15orf52Q6ZUT6 534 aaKnown RBP14.86□□□□□ -0.03
COL18A1-201ENST00000342220 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.86□□□□□ -0.03
COL18A1-201ENST00000342220 SLC16A10Q8TF71 515 aa14.86□□□□□ -0.03
COL18A1-201ENST00000342220 MRPS27Q92552 414 aaKnown RBP14.86□□□□□ -0.03
COL18A1-201ENST00000342220 RBM28Q9NW13 759 aaKnown RBP14.86□□□□□ -0.03
COL18A1-201ENST00000342220 PI4KBQ9UBF8 816 aa14.86□□□□□ -0.03
COL18A1-201ENST00000342220 MKRN1Q9UHC7 482 aaKnown RBP14.86□□□□□ -0.03
COL18A1-201ENST00000342220 GOLGA6L19H0YKK7 550 aa14.86□□□□□ -0.03
COL18A1-201ENST00000342220 EVCP57679 992 aa14.86□□□□□ -0.03
COL18A1-201ENST00000342220 SNW1Q13573 536 aaKnown RBP14.86□□□□□ -0.03
COL18A1-201ENST00000342220 C7orf43Q8WVR3 580 aa14.86□□□□□ -0.03
COL18A1-201ENST00000342220 MYH2Q9UKX2 1941 aa14.86□□□□□ -0.03
COL18A1-201ENST00000342220 USP49Q70CQ1 688 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 BRAPQ7Z569 592 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 RRP36Q96EU6 259 aaKnown RBP14.85□□□□□ -0.03
COL18A1-201ENST00000342220 TRIM75PA6NK02 468 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 TOP1P11387 765 aaKnown RBP14.85□□□□□ -0.03
COL18A1-201ENST00000342220 CASP1P29466 404 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 SYKP43405 635 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 GABPB1Q06547 395 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-201ENST00000342220 SLC20A2Q08357 652 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 ARID5BQ14865 1188 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 UPF1Q92900 1129 aaKnown RBP eCLIP14.85□□□□□ -0.031e-9■■■■□ 24.8
COL18A1-201ENST00000342220 DHX58Q96C10 678 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 SLFN14P0C7P3 912 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 ECE1P42892 770 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms