RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 KARSQ15046 597 aaKnown RBP11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 DHX40Q8IX18 779 aaKnown RBP11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 GJA10Q969M2 543 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 KCNF1Q9H3M0 494 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 GPIHBP1Q8IV16 184 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 LARGE2Q8N3Y3 721 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 SERPINB13Q9UIV8 391 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 GPR75-ASB3A0A0A6YYF3 556 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 SMCO2A6NFE2 343 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 RHBDL3P58872 404 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 UBE2SQ16763 222 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 USH1GQ495M9 461 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 RESP18Q5W5W9 173 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 CDC42EP5Q6NZY7 148 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 TRMT1LQ7Z2T5 733 aaKnown RBP11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 RRP36Q96EU6 259 aaKnown RBP11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 PHF20Q9BVI0 1012 aa11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 FBXO2Q9UK22 296 aaPredicted RBP11.59□□□□□ -0.55
RBFOX1-202ENST00000340209 NLRP12P59046 1061 aa11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 IQCB1Q15051 598 aa11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 FANCLQ9NW38 375 aa11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 C4AP0C0L4 1744 aa11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 CYTH3O43739 400 aa11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 IL1R1P14778 569 aa11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 SBK1Q52WX2 424 aa11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 UQCRHLA0A096LP55 91 aa11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 PPP6R2O75170 966 aa11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 UQCRHP07919 91 aa11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 CACTINQ8WUQ7 758 aaKnown RBP11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 ZFP91Q96JP5 570 aaPredicted RBP11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 MAD2L2Q9UI95 211 aa11.58□□□□□ -0.56
RBFOX1-202ENST00000340209 PFKFB3Q16875 520 aaPredicted RBP11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 PTPREP23469 700 aa11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 UBA7P41226 1012 aa11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 TXKP42681 527 aa11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 UBASH3AP57075 661 aa11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 MIGA2Q7L4E1 593 aa11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 A0A087X0B3 334 aa11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 TXLNAP40222 546 aa11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 STAT6P42226 847 aa11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 FUT2Q10981 343 aa11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 FOXP4Q8IVH2 680 aaPredicted RBP11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 CCDC34Q96HJ3 373 aa11.57□□□□□ -0.56
RBFOX1-202ENST00000340209 HOXA10P31260 410 aaPredicted RBP11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 DGKHQ86XP1 1220 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 SKILP12757 684 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 SLC15A2Q16348 729 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 AKT1S1Q96B36 256 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 NFE2L3Q9Y4A8 694 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 SCN7AQ01118 1682 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 FANCCQ00597 558 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 DPF2Q92785 391 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 ZHX3Q9H4I2 956 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 MAN1B1Q9UKM7 699 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 BCORQ6W2J9 1755 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 NHSQ6T4R5 1651 aa11.56□□□□□ -0.56
RBFOX1-202ENST00000340209 DDTLA6NHG4 134 aaPredicted RBP11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 TOP1P11387 765 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 CALML3P27482 149 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 GNAQP50148 359 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 RRAGBQ5VZM2 374 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 TMEM60Q9H2L4 133 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 CHD4Q14839 1912 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 SMTNL1A8MU46 457 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 TMEM232C9JQI7 657 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 PCP11498 1178 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 CCT6AP40227 531 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 TECP42680 631 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 PPP4CP60510 307 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 MYL5Q02045 173 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 RAD51AP2Q09MP3 1159 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 GRM4Q14833 912 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 SEPT2Q15019 361 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 SLC35G1Q2M3R5 365 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 RBM43Q6ZSC3 357 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 C16orf86Q6ZW13 317 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 CTNND2Q9UQB3 1225 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 SRPRBQ9Y5M8 271 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 SLC1A4P43007 532 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 DTHD1Q6ZMT9 781 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 CCDC148Q8NFR7 591 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 PCDHA4Q9UN74 947 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 LAMB2P55268 1798 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 IRS2Q9Y4H2 1338 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 CCDC178Q5BJE1 867 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 CSRNP1Q96S65 589 aa11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 SAMSN1Q9NSI8 373 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 MKRN1Q9UHC7 482 aaKnown RBP11.55□□□□□ -0.56
RBFOX1-202ENST00000340209 USP17L10C9JJH3 530 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 PPP2R5BQ15173 497 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 CERKLQ49MI3 558 aaPredicted RBP11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 HS1BP3Q53T59 392 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 FLAD1Q8NFF5 587 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 NEDD1Q8NHV4 660 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 C6orf50Q9HD87 102 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 DUOX1Q9NRD9 1551 aa11.54□□□□□ -0.56
RBFOX1-202ENST00000340209 TMOD2Q9NZR1 351 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms