RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 CCDC194A0A1B0GVG4 234 aa20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 MPHOSPH10O00566 681 aaKnown RBP20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 CCT6AP40227 531 aaKnown RBP20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 PRIMPOLQ96LW4 560 aa20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 BPIFA3Q9BQP9 254 aa20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 DDX4Q9NQI0 724 aaKnown RBP20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 SPATA31A6Q5VVP1 1343 aa20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 LETM2Q2VYF4 491 aa20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 CERS5Q8N5B7 392 aa20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 GJA10Q969M2 543 aa20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 TMEM260Q9NX78 707 aa20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 BIN2Q9UBW5 565 aaPredicted RBP20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 HOOK1Q9UJC3 728 aaKnown RBP20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 CTNND2Q9UQB3 1225 aa20.67■□□□□ 0.9
LYSMD4-201ENST00000332728 FAM237AA0A1B0GTK4 181 aa20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 PPEF1O14829 653 aaPredicted RBP20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 NAPAP54920 295 aa20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 GSTO1P78417 241 aa20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 SYT10Q6XYQ8 523 aa20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 PIGSQ96S52 555 aa20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 MTRQ99707 1265 aa20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 TTF2Q9UNY4 1162 aaKnown RBP20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 DAGLAQ9Y4D2 1042 aa20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 MORC3Q14149 939 aa20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 COA7Q96BR5 231 aa20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 MTA3Q9BTC8 594 aa20.66■□□□□ 0.9
LYSMD4-201ENST00000332728 IKBKBO14920 756 aa20.65■□□□□ 0.9
LYSMD4-201ENST00000332728 SLC16A2P36021 539 aa20.65■□□□□ 0.9
LYSMD4-201ENST00000332728 RHBDL3P58872 404 aa20.65■□□□□ 0.9
LYSMD4-201ENST00000332728 DPP8Q6V1X1 898 aaPredicted RBP20.65■□□□□ 0.9
LYSMD4-201ENST00000332728 DESI2Q9BSY9 194 aa20.65■□□□□ 0.9
LYSMD4-201ENST00000332728 GDAQ9Y2T3 454 aa20.65■□□□□ 0.9
LYSMD4-201ENST00000332728 LDHCP07864 332 aa20.65■□□□□ 0.9
LYSMD4-201ENST00000332728 ATP2B4P23634 1241 aa20.65■□□□□ 0.9
LYSMD4-201ENST00000332728 PES1O00541 588 aaKnown RBP20.64■□□□□ 0.9
LYSMD4-201ENST00000332728 RBM5P52756 815 aaKnown RBP eCLIP20.64■□□□□ 0.9
LYSMD4-201ENST00000332728 COL23A1Q86Y22 540 aaPredicted RBP20.64■□□□□ 0.9
LYSMD4-201ENST00000332728 GPIHBP1Q8IV16 184 aa20.64■□□□□ 0.9
LYSMD4-201ENST00000332728 KIAA0825Q8IV33 1275 aa20.64■□□□□ 0.9
LYSMD4-201ENST00000332728 ZFPM1Q8IX07 1006 aa20.64■□□□□ 0.9
LYSMD4-201ENST00000332728 KLHL34Q8N239 644 aa20.64■□□□□ 0.9
LYSMD4-201ENST00000332728 CCDC112Q8NEF3 446 aa20.64■□□□□ 0.9
LYSMD4-201ENST00000332728 SPDYE4A6NLX3 237 aa20.64■□□□□ 0.89
LYSMD4-201ENST00000332728 APBA3O96018 575 aa20.64■□□□□ 0.89
LYSMD4-201ENST00000332728 AKR1B1P15121 316 aa20.64■□□□□ 0.89
LYSMD4-201ENST00000332728 RCAN1P53805 252 aa20.64■□□□□ 0.89
LYSMD4-201ENST00000332728 CRY2Q49AN0 593 aa20.64■□□□□ 0.89
LYSMD4-201ENST00000332728 RRAGBQ5VZM2 374 aa20.64■□□□□ 0.89
LYSMD4-201ENST00000332728 LRRN4CLQ8ND94 238 aa20.64■□□□□ 0.89
LYSMD4-201ENST00000332728 ZC3H12CQ9C0D7 883 aaKnown RBP20.64■□□□□ 0.89
LYSMD4-201ENST00000332728 PCDHA6Q9UN73 950 aa20.64■□□□□ 0.89
LYSMD4-201ENST00000332728 PCDHA8Q9Y5H6 950 aa20.64■□□□□ 0.89
LYSMD4-201ENST00000332728 RRP9O43818 475 aaKnown RBP20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 SLFN14P0C7P3 912 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 ERCC3P19447 782 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 TERF1P54274 439 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 ATP2C1P98194 919 aaPredicted RBP20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 NFIAQ12857 509 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 PPP2R5BQ15173 497 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 MMP10P09238 476 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 ZBTB9Q96C00 473 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 PPP1R13BQ96KQ4 1090 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 OSBPL5Q9H0X9 879 aaPredicted RBP20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 SARSP49591 514 aaKnown RBP20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 GRM4Q14833 912 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 MTF1Q14872 753 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 DGKHQ86XP1 1220 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 PCDHA4Q9UN74 947 aa20.63■□□□□ 0.89
LYSMD4-201ENST00000332728 CCNT1O60563 726 aaKnown RBP20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 TAL1P17542 331 aaPredicted RBP20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 GSDMDP57764 484 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 TAF1LQ8IZX4 1826 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 CCDC88AQ3V6T2 1871 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 GPR75-ASB3A0A0A6YYF3 556 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 A0A0U1RQJ8 604 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 TRIM49BA6NDI0 452 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 PARP1P09874 1014 aaKnown RBP20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 PCP11498 1178 aaKnown RBP20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 SNAP25P60880 206 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 TTBK2Q6IQ55 1244 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 VSTM4Q8IW00 320 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 ATRIPQ8WXE1 791 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 HPS3Q969F9 1004 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 USP40Q9NVE5 1235 aa20.62■□□□□ 0.89
LYSMD4-201ENST00000332728 STXBP3O00186 592 aa20.61■□□□□ 0.89
LYSMD4-201ENST00000332728 ZNF579Q8NAF0 562 aaKnown RBP20.61■□□□□ 0.89
LYSMD4-201ENST00000332728 VPS16Q9H269 839 aa20.61■□□□□ 0.89
LYSMD4-201ENST00000332728 SMCO2A6NFE2 343 aa20.61■□□□□ 0.89
LYSMD4-201ENST00000332728 LRRC15Q8TF66 581 aa20.61■□□□□ 0.89
LYSMD4-201ENST00000332728 BBOX1O75936 387 aa20.6■□□□□ 0.89
LYSMD4-201ENST00000332728 IL1R1P14778 569 aa20.6■□□□□ 0.89
LYSMD4-201ENST00000332728 STAT6P42226 847 aa20.6■□□□□ 0.89
LYSMD4-201ENST00000332728 PPP4CP60510 307 aa20.6■□□□□ 0.89
LYSMD4-201ENST00000332728 SAMD1Q6SPF0 538 aaPredicted RBP20.6■□□□□ 0.89
LYSMD4-201ENST00000332728 KCTD1Q719H9 257 aa20.6■□□□□ 0.89
LYSMD4-201ENST00000332728 CERKQ8TCT0 537 aa20.6■□□□□ 0.89
LYSMD4-201ENST00000332728 ZNF215Q9UL58 517 aaPredicted RBP20.6■□□□□ 0.89
LYSMD4-201ENST00000332728 SYNRGQ9UMZ2 1314 aa20.6■□□□□ 0.89
LYSMD4-201ENST00000332728 SBF2Q86WG5 1849 aa20.6■□□□□ 0.89
LYSMD4-201ENST00000332728 NHSQ6T4R5 1651 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms