RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 ZKSCAN5Q9Y2L8 839 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 TNKSO95271 1327 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 GOLGA6L6A8MZA4 724 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 RAD17O75943 681 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 DDAH1O94760 285 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 LDHBP07195 334 aaKnown RBP8.62□□□□□ -1.03
TRIM42-201ENST00000286349 RBM5P52756 815 aaKnown RBP eCLIP8.62□□□□□ -1.03
TRIM42-201ENST00000286349 GTF2IP78347 998 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 AKAP17AQ02040 695 aaKnown RBP8.62□□□□□ -1.03
TRIM42-201ENST00000286349 CXCL9Q07325 125 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 ZSCAN26Q16670 478 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 ZNF654Q8IZM8 581 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 FANCBQ8NB91 859 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 SLC26A6Q9BXS9 759 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 RNF26Q9BY78 433 aaPredicted RBP8.62□□□□□ -1.03
TRIM42-201ENST00000286349 FAM217BQ9NTX9 383 aaPredicted RBP8.62□□□□□ -1.03
TRIM42-201ENST00000286349 ZNRF3Q9ULT6 936 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 PCDHA7Q9UN72 937 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 CCDC88AQ3V6T2 1871 aa8.62□□□□□ -1.03
TRIM42-201ENST00000286349 FAM205AQ6ZU69 1335 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 POLR3DP05423 398 aaPredicted RBP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 SLFN14P0C7P3 912 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 SLC39A14Q15043 492 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 SEC23AQ15436 765 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 STX1AQ16623 288 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 DACT2Q5SW24 774 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 IFIT1BQ5T764 474 aaKnown RBP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 SLF2Q8IX21 1173 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 FSIP1Q8NA03 581 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 ENGASEQ8NFI3 743 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 FOXP1Q9H334 677 aaPredicted RBP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 CCP110O43303 1012 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 RANBP6O60518 1105 aaKnown RBP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 ADCY5O95622 1261 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 SETSIPP0DME0 302 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 CMA1P23946 247 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 GTF2F1P35269 517 aaKnown RBP eCLIP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 DYNLL1P63167 89 aaKnown RBP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 CHAF1AQ13111 956 aaPredicted RBP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 SNW1Q13573 536 aaKnown RBP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 RAB11FIP4Q86YS3 637 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 NIM1KQ8IY84 436 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 CRACR2BQ8N4Y2 399 aaPredicted RBP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 ZNF384Q8TF68 577 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 PHKBQ93100 1093 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 ARPC5LQ9BPX5 153 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 UBA5Q9GZZ9 404 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 NAT10Q9H0A0 1025 aaKnown RBP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 DCP1AQ9NPI6 582 aaPredicted RBP8.61□□□□□ -1.03
TRIM42-201ENST00000286349 OGFRQ9NZT2 677 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 RNF181Q9P0P0 153 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 TACC3Q9Y6A5 838 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 ZNF541Q9H0D2 1346 aa8.61□□□□□ -1.03
TRIM42-201ENST00000286349 HMGB1P1B2RPK0 211 aaPredicted RBP8.6□□□□□ -1.03
TRIM42-201ENST00000286349 SMAPO00193 183 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 PSMD14O00487 310 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 PPFIA4O75335 1185 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 MMP1P03956 469 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 VIL1P09327 827 aaKnown RBP8.6□□□□□ -1.03
TRIM42-201ENST00000286349 RXRAP19793 462 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 MAGEA8P43361 318 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 ZRSR1Q15695 479 aaKnown RBP8.6□□□□□ -1.03
TRIM42-201ENST00000286349 MAP9Q49MG5 647 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 ANO6Q4KMQ2 910 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 RILPL1Q5EBL4 403 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 JAKMIP3Q5VZ66 844 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 OTUD7BQ6GQQ9 843 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 CKAP2LQ8IYA6 745 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 GMLQ99445 158 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM42-201ENST00000286349 ZNF287Q9HBT7 754 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 SENP2Q9HC62 589 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 INCENPQ9NQS7 918 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.6□□□□□ -1.03
TRIM42-201ENST00000286349 ANO10Q9NW15 660 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 AATFQ9NY61 560 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM42-201ENST00000286349 CEP131Q9UPN4 1083 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM42-201ENST00000286349 CLIC4Q9Y696 253 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 LAMB1P07942 1786 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 KIF28PB7ZC32 967 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 USP17L12C9JPN9 530 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 USP17L21D6R901 530 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 PLCG2P16885 1265 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 PAX3P23760 479 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 PRDX5P30044 214 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 NAP1L1P55209 391 aaKnown RBP8.6□□□□□ -1.03
TRIM42-201ENST00000286349 PPP4CP60510 307 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 NOSTRINQ8IVI9 506 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 CCDC144CPQ8IYA2 1237 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 FMR1NBQ8N0W7 255 aaPredicted RBP8.6□□□□□ -1.03
TRIM42-201ENST00000286349 MYRIPQ8NFW9 859 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 NKX2-3Q8TAU0 364 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 JDP2Q8WYK2 163 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 FTOQ9C0B1 505 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM42-201ENST00000286349 GOLPH3LQ9H4A5 285 aa8.6□□□□□ -1.03
TRIM42-201ENST00000286349 MORC2Q9Y6X9 1032 aaPredicted RBP8.6□□□□□ -1.03
TRIM42-201ENST00000286349 USP17L3A6NCW0 530 aa8.59□□□□□ -1.03
TRIM42-201ENST00000286349 USP17L4A6NCW7 530 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms