RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 FAM177A1Q8N128 213 aaPredicted RBP16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 DDX4Q9NQI0 724 aaKnown RBP16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 SKILP12757 684 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 IKQ13123 557 aaPredicted RBP16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 POSTNQ15063 836 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 CRY2Q49AN0 593 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 ZFPM1Q8IX07 1006 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 SMARCE1Q969G3 411 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 PHF20Q9BVI0 1012 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 LRP5O75197 1615 aa16.66■□□□□ 0.26
TRAFD1-201ENST00000257604 DDAH1O94760 285 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 SRGNP10124 158 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 COA7Q96BR5 231 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 BIN2Q9UBW5 565 aaPredicted RBP16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 CEP131Q9UPN4 1083 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 FAM205AQ6ZU69 1335 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 A0A087X0B3 334 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 PTPREP23469 700 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 SNAP25P60880 206 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 LRRC8AQ8IWT6 810 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 LRRN4CLQ8ND94 238 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 CYTH3O43739 400 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 AKR1B1P15121 316 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 CPLX3Q8WVH0 158 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 DPF2Q92785 391 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 PIGSQ96S52 555 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 OGFRQ9NZT2 677 aa16.65■□□□□ 0.26
TRAFD1-201ENST00000257604 PARP1P09874 1014 aaKnown RBP16.64■□□□□ 0.25
TRAFD1-201ENST00000257604 EZH2Q15910 746 aaKnown RBP16.64■□□□□ 0.25
TRAFD1-201ENST00000257604 KCTD1Q719H9 257 aa16.64■□□□□ 0.25
TRAFD1-201ENST00000257604 UBASH3AP57075 661 aa16.64■□□□□ 0.25
TRAFD1-201ENST00000257604 RBM6P78332 1123 aaKnown RBP16.64■□□□□ 0.25
TRAFD1-201ENST00000257604 AOC3Q16853 763 aa16.64■□□□□ 0.25
TRAFD1-201ENST00000257604 WWC2Q6AWC2 1192 aa16.64■□□□□ 0.25
TRAFD1-201ENST00000257604 TRIM34Q9BYJ4 488 aa16.64■□□□□ 0.25
TRAFD1-201ENST00000257604 ATP6V0A2Q9Y487 856 aa16.64■□□□□ 0.25
TRAFD1-201ENST00000257604 TNRC6CQ9HCJ0 1690 aaKnown RBP16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 C21orf2O43822 256 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 KARSQ15046 597 aaKnown RBP16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 PTPN14Q15678 1187 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 BLIDQ8IZY5 108 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 CACNA1SQ13698 1873 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 KIF20AO95235 890 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 RXRBP28702 533 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 SBK1Q52WX2 424 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 SEC63Q9UGP8 760 aaKnown RBP16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 C4BP0C0L5 1744 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 H0YIN7 160 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 TULP1O00294 542 aaPredicted RBP16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 RHBDL3P58872 404 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 FANCCQ00597 558 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 FEZ1Q99689 392 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 MAD2L2Q9UI95 211 aa16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 HOOK1Q9UJC3 728 aaKnown RBP16.63■□□□□ 0.25
TRAFD1-201ENST00000257604 COL5A3P25940 1745 aaPredicted RBP16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 TMEM232C9JQI7 657 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 BMP6P22004 513 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 PFKFB3Q16875 520 aaPredicted RBP16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 KMT5BQ4FZB7 885 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 SOGA3Q5TF21 947 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 TTBK2Q6IQ55 1244 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 DEFB132Q7Z7B7 95 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 GJA10Q969M2 543 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 TMEM260Q9NX78 707 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 MAN1B1Q9UKM7 699 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 GPR75-ASB3A0A0A6YYF3 556 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 GDF11O95390 407 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 ERCC3P19447 782 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 SLC35G1Q2M3R5 365 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 SP8Q8IXZ3 490 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 PAXBP1Q9Y5B6 917 aa16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 SRPRBQ9Y5M8 271 aaKnown RBP16.62■□□□□ 0.25
TRAFD1-201ENST00000257604 ZNF287Q9HBT7 754 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 MKRN1Q9UHC7 482 aaKnown RBP16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 HPSEQ9Y251 543 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 NFE2L3Q9Y4A8 694 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 C4AP0C0L4 1744 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 IRS2Q9Y4H2 1338 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 SMCO2A6NFE2 343 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 MARCH6O60337 910 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 CCNT1O60563 726 aaKnown RBP16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 IL1R1P14778 569 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 NPR1P16066 1061 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 TAL1P17542 331 aaPredicted RBP16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 FMR1Q06787 632 aaKnown RBP eCLIP16.61■□□□□ 0.254e-6■■□□□ 13.3
TRAFD1-201ENST00000257604 SLF2Q8IX21 1173 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 SAMSN1Q9NSI8 373 aaKnown RBP16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 CLRN2A0PK11 232 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 PDE6BP35913 854 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 DGKHQ86XP1 1220 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 TBC1D22AQ8WUA7 517 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 CRAMP1Q96RY5 1269 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 EPC1Q9H2F5 836 aa16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 DDX41Q9UJV9 622 aaKnown RBP16.61■□□□□ 0.25
TRAFD1-201ENST00000257604 RAD17O75943 681 aa16.6■□□□□ 0.25
TRAFD1-201ENST00000257604 ALDH1B1P30837 517 aa16.6■□□□□ 0.25
TRAFD1-201ENST00000257604 MYL5Q02045 173 aa16.6■□□□□ 0.25
TRAFD1-201ENST00000257604 KIF18AQ8NI77 898 aa16.6■□□□□ 0.25
TRAFD1-201ENST00000257604 PLCG2P16885 1265 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms