RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	GRC3	Q07845	632 aa		4.01	□□□□□ -1.77
CAF20	YOR276W	GPN2	Q08726	347 aa	Predicted RBP	4.01	□□□□□ -1.77
CAF20	YOR276W	GET3	Q12154	354 aa	Known RBP	4.01	□□□□□ -1.77
CAF20	YOR276W	MDM20	Q12387	796 aa	Known RBP	4.01	□□□□□ -1.77
CAF20	YOR276W	ZPS1	Q12512	249 aa		4.01	□□□□□ -1.77
CAF20	YOR276W	PGA3	Q12746	312 aa	Known RBP	4.01	□□□□□ -1.77
CAF20	YOR276W	KGD2	P19262	463 aa	Predicted RBP	4	□□□□□ -1.77
CAF20	YOR276W	OCA4	P25366	362 aa		4	□□□□□ -1.77
CAF20	YOR276W	DMC1	P25453	334 aa		4	□□□□□ -1.77
CAF20	YOR276W	RPF2	P36160	344 aa	Known RBP	4	□□□□□ -1.77
CAF20	YOR276W	UBP13	P38187	747 aa		4	□□□□□ -1.77
CAF20	YOR276W	REG2	P38232	338 aa		4	□□□□□ -1.77
CAF20	YOR276W	BDH2	P39713	417 aa		4	□□□□□ -1.77
CAF20	YOR276W	CCT7	P42943	550 aa	Known RBP	4	□□□□□ -1.77
CAF20	YOR276W	YAT1	P80235	687 aa		4	□□□□□ -1.77
CAF20	YOR276W	YML037C	Q03703	340 aa		4	□□□□□ -1.77
CAF20	YOR276W	ARO10	Q06408	635 aa		4	□□□□□ -1.77
CAF20	YOR276W	TAF3	Q12297	353 aa		4	□□□□□ -1.77
CAF20	YOR276W	RTN2	Q12443	393 aa		4	□□□□□ -1.77
CAF20	YOR276W	SPE4	Q12455	300 aa		4	□□□□□ -1.77
CAF20	YOR276W	YNL162W-A	Q3E7A8	72 aa		4	□□□□□ -1.77
CAF20	YOR276W	Q0010	Q9ZZX9	128 aa		4	□□□□□ -1.77
CAF20	YOR276W	CPA2	P03965	1118 aa	Known RBP	3.99	□□□□□ -1.77
CAF20	YOR276W	CHO2	P05374	869 aa	Known RBP	3.99	□□□□□ -1.77
CAF20	YOR276W	WHI2	P12611	486 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	YSP3	P25036	478 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	RRP43	P25359	394 aa	Predicted RBP	3.99	□□□□□ -1.77
CAF20	YOR276W	RPC53	P25441	422 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	ADY2	P25613	283 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	CDC15	P27636	974 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	LAC1	P28496	418 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	MRPL9	P31334	269 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	NPL6	P32832	435 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	PXA2	P34230	853 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	YKL050C	P35736	922 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	HES1	P35843	434 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	UTP9	P38882	575 aa	Known RBP	3.99	□□□□□ -1.77
CAF20	YOR276W	AFG3	P39925	761 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	SAP1	P39955	897 aa	Known RBP	3.99	□□□□□ -1.77
CAF20	YOR276W	MIT1	P40002	666 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	LSM5	P40089	93 aa	Known RBP	3.99	□□□□□ -1.77
CAF20	YOR276W	DOT5	P40553	215 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	AXL1	P40851	1208 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	SWP82	P43554	623 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	COG2	P53271	262 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	YGR250C	P53316	781 aa	Known RBP	3.99	□□□□□ -1.77
CAF20	YOR276W	COQ6	P53318	479 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	ADE16	P54113	591 aa	Known RBP	3.99	□□□□□ -1.77
CAF20	YOR276W	PCL8	Q08966	492 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	LCB4	Q12246	624 aa		3.99	□□□□□ -1.77
CAF20	YOR276W	LCB1	P25045	558 aa	Known RBP	3.98	□□□□□ -1.77
CAF20	YOR276W	YMC2	P38087	329 aa		3.98	□□□□□ -1.77
CAF20	YOR276W	YEL057C	P39983	233 aa		3.98	□□□□□ -1.77
CAF20	YOR276W	RGI2	P40188	164 aa		3.98	□□□□□ -1.77
CAF20	YOR276W	LAS21	P40367	830 aa		3.98	□□□□□ -1.77
CAF20	YOR276W	MSY1	P48527	492 aa		3.98	□□□□□ -1.77
CAF20	YOR276W	WAR1	Q03631	944 aa		3.98	□□□□□ -1.77
CAF20	YOR276W	RAD33	Q04231	177 aa		3.98	□□□□□ -1.77
CAF20	YOR276W	PLM2	Q04383	521 aa		3.98	□□□□□ -1.77
CAF20	YOR276W	PSR1	Q07800	427 aa		3.98	□□□□□ -1.77
CAF20	YOR276W	BAG7	Q12128	409 aa		3.98	□□□□□ -1.77
CAF20	YOR276W	AHA1	Q12449	350 aa	Known RBP	3.98	□□□□□ -1.77
CAF20	YOR276W	STE12	P13574	688 aa		3.97	□□□□□ -1.77
CAF20	YOR276W	DBF4	P32325	704 aa		3.97	□□□□□ -1.77
CAF20	YOR276W	ORC2	P32833	620 aa		3.97	□□□□□ -1.77
CAF20	YOR276W	NTR2	P36118	322 aa	Predicted RBP	3.97	□□□□□ -1.77
CAF20	YOR276W	SRP72	P38688	640 aa	Known RBP	3.97	□□□□□ -1.77
CAF20	YOR276W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
CAF20	YOR276W	MAF1	P41910	395 aa		3.97	□□□□□ -1.77
CAF20	YOR276W	RPS7B	P48164	190 aa	Known RBP	3.97	□□□□□ -1.77
CAF20	YOR276W	AAT1	Q01802	451 aa		3.97	□□□□□ -1.77
CAF20	YOR276W	SXM1	Q04175	944 aa	Known RBP	3.97	□□□□□ -1.77
CAF20	YOR276W	GFD1	Q04839	188 aa	Known RBP	3.97	□□□□□ -1.77
CAF20	YOR276W	YLR352W	Q06479	807 aa		3.97	□□□□□ -1.77
CAF20	YOR276W	BUD7	Q08754	746 aa		3.97	□□□□□ -1.77
CAF20	YOR276W	SFI1	Q12369	946 aa		3.97	□□□□□ -1.77
CAF20	YOR276W	SMC6	Q12749	1114 aa		3.97	□□□□□ -1.77
CAF20	YOR276W	YPT6	Q99260	215 aa		3.97	□□□□□ -1.77
CAF20	YOR276W	SEC3	P33332	1336 aa	Known RBP	3.96	□□□□□ -1.77
CAF20	YOR276W	TPK2	P06245	380 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	ARD1	P07347	238 aa	Predicted RBP	3.96	□□□□□ -1.78
CAF20	YOR276W	PCT1	P13259	424 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	PDX1	P16451	410 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	SWI3	P32591	825 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	MNN2	P38069	597 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	AGP2	P38090	596 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	VBA2	P38358	474 aa	Known RBP	3.96	□□□□□ -1.78
CAF20	YOR276W	BUR6	P40096	142 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	YFL015C	P43578	164 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	ASN1	P49089	572 aa	Known RBP	3.96	□□□□□ -1.78
CAF20	YOR276W	YGL117W	P53133	265 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	DCP2	P53550	970 aa	Known RBP	3.96	□□□□□ -1.78
CAF20	YOR276W	APM1	Q00776	475 aa	Predicted RBP	3.96	□□□□□ -1.78
CAF20	YOR276W	YEH1	Q07804	573 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	YPL191C	Q08930	360 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	YJR112W-A	Q3E743	109 aa		3.96	□□□□□ -1.78
CAF20	YOR276W	SES1	P07284	462 aa	Known RBP	3.95	□□□□□ -1.78
CAF20	YOR276W	EST1	P17214	699 aa	Predicted RBP	3.95	□□□□□ -1.78
CAF20	YOR276W	MDM10	P18409	493 aa		3.95	□□□□□ -1.78
CAF20	YOR276W	SRP54	P20424	541 aa	Known RBP	3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms