RNA–Protein interactions for RNA: YOR075W

UFE1, Transcript of t-SNARE protein required for retrograde vesicular traffic, yeast

Gene UFE1, Length 1,041 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UFE1	YOR075W	VID22	Q05934	901 aa		4.23	□□□□□ -1.73
UFE1	YOR075W	YLR455W	Q06188	304 aa		4.23	□□□□□ -1.73
UFE1	YOR075W	HER1	Q12276	1246 aa		4.23	□□□□□ -1.73
UFE1	YOR075W	VCX1	Q99385	411 aa		4.23	□□□□□ -1.73
UFE1	YOR075W	SNF1	P06782	633 aa	Known RBP	4.22	□□□□□ -1.73
UFE1	YOR075W	GPA1	P08539	472 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	YCP4	P25349	247 aa	Known RBP	4.22	□□□□□ -1.73
UFE1	YOR075W	YCR006C	P25350	157 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	DPB3	P27344	201 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	CDC15	P27636	974 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	CNS1	P33313	385 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	SOF1	P33750	489 aa	Known RBP	4.22	□□□□□ -1.73
UFE1	YOR075W	SCO2	P38072	301 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	SEC31	P38968	1273 aa	Known RBP	4.22	□□□□□ -1.73
UFE1	YOR075W	RIC1	P40395	1056 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	PFK26	P40433	827 aa	Known RBP	4.22	□□□□□ -1.73
UFE1	YOR075W	RPN11	P43588	306 aa	Known RBP	4.22	□□□□□ -1.73
UFE1	YOR075W	YPT11	P48559	417 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	REG1	Q00816	1014 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	YPL068C	Q02749	293 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	FCP1	Q03254	732 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	ECM22	Q05958	814 aa	Predicted RBP	4.22	□□□□□ -1.73
UFE1	YOR075W	YLR049C	Q12110	428 aa		4.22	□□□□□ -1.73
UFE1	YOR075W	UBP13	P38187	747 aa		4.21	□□□□□ -1.74
UFE1	YOR075W	VPS41	P38959	992 aa		4.21	□□□□□ -1.74
UFE1	YOR075W	KAP123	P40069	1113 aa	Known RBP	4.21	□□□□□ -1.74
UFE1	YOR075W	SWP82	P43554	623 aa		4.21	□□□□□ -1.74
UFE1	YOR075W	MDV1	P47025	714 aa		4.21	□□□□□ -1.74
UFE1	YOR075W	VPS4	P52917	437 aa		4.21	□□□□□ -1.74
UFE1	YOR075W	TRM8	Q12009	286 aa		4.21	□□□□□ -1.74
UFE1	YOR075W	NUS1	Q12063	375 aa		4.21	□□□□□ -1.74
UFE1	YOR075W	YLR302C	O13544	120 aa		4.2	□□□□□ -1.74
UFE1	YOR075W	YPT1	P01123	206 aa	Known RBP	4.2	□□□□□ -1.74
UFE1	YOR075W	SLC1	P33333	303 aa		4.2	□□□□□ -1.74
UFE1	YOR075W	CTK2	P46962	323 aa		4.2	□□□□□ -1.74
UFE1	YOR075W	YML131W	Q03102	365 aa		4.2	□□□□□ -1.74
UFE1	YOR075W	PET111	P08468	800 aa		4.19	□□□□□ -1.74
UFE1	YOR075W	ERG8	P24521	451 aa		4.19	□□□□□ -1.74
UFE1	YOR075W	PXL1	P36166	706 aa		4.19	□□□□□ -1.74
UFE1	YOR075W	ECM10	P39987	644 aa		4.19	□□□□□ -1.74
UFE1	YOR075W	YER010C	P40011	234 aa		4.19	□□□□□ -1.74
UFE1	YOR075W	YIR016W	P40572	265 aa		4.19	□□□□□ -1.74
UFE1	YOR075W	IRC8	P47046	822 aa		4.19	□□□□□ -1.74
UFE1	YOR075W	VPS25	P47142	202 aa		4.19	□□□□□ -1.74
UFE1	YOR075W	YGL036W	P53185	909 aa	Predicted RBP	4.19	□□□□□ -1.74
UFE1	YOR075W	RSM28	Q03430	361 aa		4.19	□□□□□ -1.74
UFE1	YOR075W	CAC2	Q04199	468 aa		4.19	□□□□□ -1.74
UFE1	YOR075W	RCO1	Q04779	684 aa		4.19	□□□□□ -1.74
UFE1	YOR075W	NEW1	Q08972	1196 aa	Known RBP	4.19	□□□□□ -1.74
UFE1	YOR075W	YER145C-A	A0A023PYF4	145 aa		4.18	□□□□□ -1.74
UFE1	YOR075W	GUK1	P15454	187 aa	Known RBP	4.18	□□□□□ -1.74
UFE1	YOR075W	TRX2	P22803	104 aa	Known RBP	4.18	□□□□□ -1.74
UFE1	YOR075W	STE50	P25344	346 aa		4.18	□□□□□ -1.74
UFE1	YOR075W	GND1	P38720	489 aa	Known RBP	4.18	□□□□□ -1.74
UFE1	YOR075W	PSD1	P39006	500 aa		4.18	□□□□□ -1.74
UFE1	YOR075W	IST1	P53843	298 aa	Predicted RBP	4.18	□□□□□ -1.74
UFE1	YOR075W	PFA5	Q03289	374 aa		4.18	□□□□□ -1.74
UFE1	YOR075W	PSK2	Q08217	1101 aa		4.18	□□□□□ -1.74
UFE1	YOR075W	GSH2	Q08220	491 aa		4.18	□□□□□ -1.74
UFE1	YOR075W	CIR2	Q08822	631 aa		4.18	□□□□□ -1.74
UFE1	YOR075W	FRE3	Q08905	711 aa		4.18	□□□□□ -1.74
UFE1	YOR075W	UBX3	Q12229	455 aa		4.18	□□□□□ -1.74
UFE1	YOR075W	RPB2	P08518	1224 aa	Known RBP	4.17	□□□□□ -1.74
UFE1	YOR075W	CBF2	P32504	956 aa		4.17	□□□□□ -1.74
UFE1	YOR075W	ATO2	P32907	282 aa		4.17	□□□□□ -1.74
UFE1	YOR075W	RRN3	P36070	627 aa		4.17	□□□□□ -1.74
UFE1	YOR075W	LYS20	P48570	428 aa	Known RBP	4.17	□□□□□ -1.74
UFE1	YOR075W	YNR061C	P53747	219 aa		4.17	□□□□□ -1.74
UFE1	YOR075W	BOP3	P53958	396 aa		4.17	□□□□□ -1.74
UFE1	YOR075W	POS5	Q06892	414 aa		4.17	□□□□□ -1.74
UFE1	YOR075W	GPN2	Q08726	347 aa	Predicted RBP	4.17	□□□□□ -1.74
UFE1	YOR075W	DSE3	Q08729	430 aa		4.17	□□□□□ -1.74
UFE1	YOR075W	NBP2	Q12163	236 aa		4.17	□□□□□ -1.74
UFE1	YOR075W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
UFE1	YOR075W	YOR019W	Q99248	730 aa		4.17	□□□□□ -1.74
UFE1	YOR075W	CHO1	P08456	276 aa		4.16	□□□□□ -1.74
UFE1	YOR075W	RAP1	P11938	827 aa		4.16	□□□□□ -1.74
UFE1	YOR075W	SAC1	P32368	623 aa	Known RBP	4.16	□□□□□ -1.74
UFE1	YOR075W	MRP20	P32387	263 aa		4.16	□□□□□ -1.74
UFE1	YOR075W	AXL2	P38928	823 aa		4.16	□□□□□ -1.74
UFE1	YOR075W	ASI1	P54074	624 aa		4.16	□□□□□ -1.74
UFE1	YOR075W	MLH2	Q07980	695 aa		4.16	□□□□□ -1.74
UFE1	YOR075W	SSP2	Q08646	371 aa		4.16	□□□□□ -1.74
UFE1	YOR075W	HXK2	P04807	486 aa	Known RBP	4.15	□□□□□ -1.75
UFE1	YOR075W	CLB2	P24869	491 aa		4.15	□□□□□ -1.75
UFE1	YOR075W	RER1	P25560	188 aa		4.15	□□□□□ -1.75
UFE1	YOR075W	ESL2	P36168	1195 aa		4.15	□□□□□ -1.75
UFE1	YOR075W	PKP1	P40530	394 aa		4.15	□□□□□ -1.75
UFE1	YOR075W	IME4	P41833	600 aa		4.15	□□□□□ -1.75
UFE1	YOR075W	YFR020W	P43600	232 aa		4.15	□□□□□ -1.75
UFE1	YOR075W	MUB1	Q03162	620 aa		4.15	□□□□□ -1.75
UFE1	YOR075W	SNO4	Q04902	237 aa		4.15	□□□□□ -1.75
UFE1	YOR075W	ECI1	Q05871	280 aa		4.15	□□□□□ -1.75
UFE1	YOR075W	HSP33	Q08914	237 aa	Known RBP	4.15	□□□□□ -1.75
UFE1	YOR075W	HSP32	Q08992	237 aa		4.15	□□□□□ -1.75
UFE1	YOR075W	YBR085C-A	O43137	85 aa		4.14	□□□□□ -1.75
UFE1	YOR075W	KRS1	P15180	591 aa	Known RBP	4.14	□□□□□ -1.75
UFE1	YOR075W	TKL1	P23254	680 aa	Known RBP	4.14	□□□□□ -1.75
UFE1	YOR075W	PCL6	P40038	420 aa		4.14	□□□□□ -1.75
UFE1	YOR075W	YIL152W	P40455	235 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms