RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeastyeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN1YOL116W TOM1Q03280 3268 aa3.5□□□□□ -1.85
MSN1YOL116W YPR089WO13585 888 aa3.49□□□□□ -1.85
MSN1YOL116W ILV2P07342 687 aaKnown RBP3.49□□□□□ -1.85
MSN1YOL116W YMR085WP0CF18 432 aa3.49□□□□□ -1.85
MSN1YOL116W SST2P11972 698 aaKnown RBP3.49□□□□□ -1.85
MSN1YOL116W YAP1P19880 650 aaKnown RBP3.49□□□□□ -1.85
MSN1YOL116W COQ3P27680 312 aa3.49□□□□□ -1.85
MSN1YOL116W ECM32P32644 1121 aaKnown RBP3.49□□□□□ -1.85
MSN1YOL116W NUP133P36161 1157 aa3.49□□□□□ -1.85
MSN1YOL116W MPP10P47083 593 aaKnown RBP3.49□□□□□ -1.85
MSN1YOL116W THI3Q07471 609 aa3.49□□□□□ -1.85
MSN1YOL116W PRD1P25375 712 aa3.48□□□□□ -1.85
MSN1YOL116W KRE2P27809 442 aa3.48□□□□□ -1.85
MSN1YOL116W MGM1P32266 881 aa3.48□□□□□ -1.85
MSN1YOL116W RPT3P33298 428 aaKnown RBP3.48□□□□□ -1.85
MSN1YOL116W GRX7P38068 203 aa3.48□□□□□ -1.85
MSN1YOL116W IMD2P38697 523 aaKnown RBP3.48□□□□□ -1.85
MSN1YOL116W VPS8P39702 1274 aa3.48□□□□□ -1.85
MSN1YOL116W YIL024CP40543 189 aa3.48□□□□□ -1.85
MSN1YOL116W IMA5P40884 581 aa3.48□□□□□ -1.85
MSN1YOL116W IMD3P50095 523 aaKnown RBP3.48□□□□□ -1.85
MSN1YOL116W PEX8P53248 589 aa3.48□□□□□ -1.85
MSN1YOL116W COP1P53622 1201 aaKnown RBP3.48□□□□□ -1.85
MSN1YOL116W TEP1P53916 434 aa3.48□□□□□ -1.85
MSN1YOL116W ATG21Q02887 496 aa3.48□□□□□ -1.85
MSN1YOL116W ARA2Q04212 335 aa3.48□□□□□ -1.85
MSN1YOL116W RTT109Q07794 436 aa3.48□□□□□ -1.85
MSN1YOL116W GEP3Q08622 556 aa3.48□□□□□ -1.85
MSN1YOL116W LYS21Q12122 440 aaKnown RBP3.48□□□□□ -1.85
MSN1YOL116W MPD2Q99316 277 aa3.48□□□□□ -1.85
MSN1YOL116W UTP10P42945 1769 aaKnown RBP3.48□□□□□ -1.85
MSN1YOL116W SES1P07284 462 aaKnown RBP3.47□□□□□ -1.85
MSN1YOL116W MSS51P32335 436 aa3.47□□□□□ -1.85
MSN1YOL116W SPL2P38839 148 aa3.47□□□□□ -1.85
MSN1YOL116W FUN12P39730 1002 aaKnown RBP3.47□□□□□ -1.85
MSN1YOL116W CAB2P40506 365 aa3.47□□□□□ -1.85
MSN1YOL116W FAF1P40546 346 aaPredicted RBP3.47□□□□□ -1.85
MSN1YOL116W CIN1P40987 1014 aa3.47□□□□□ -1.85
MSN1YOL116W SCW4P53334 386 aaKnown RBP3.47□□□□□ -1.85
MSN1YOL116W ESF2P53743 316 aaKnown RBP3.47□□□□□ -1.85
MSN1YOL116W TGL2P54857 326 aa3.47□□□□□ -1.85
MSN1YOL116W CEG1Q01159 459 aaPredicted RBP3.47□□□□□ -1.85
MSN1YOL116W YPL068CQ02749 293 aa3.47□□□□□ -1.85
MSN1YOL116W IRC4Q03036 179 aa3.47□□□□□ -1.85
MSN1YOL116W YOL057WQ08225 711 aa3.47□□□□□ -1.85
MSN1YOL116W PTC6P25646 442 aa3.46□□□□□ -1.86
MSN1YOL116W ASK1P35734 292 aa3.46□□□□□ -1.86
MSN1YOL116W YMR124WP39523 943 aaKnown RBP3.46□□□□□ -1.86
MSN1YOL116W SKP2P42843 763 aa3.46□□□□□ -1.86
MSN1YOL116W UBX6P47049 396 aa3.46□□□□□ -1.86
MSN1YOL116W MAD3P47074 515 aa3.46□□□□□ -1.86
MSN1YOL116W ORC5P50874 479 aa3.46□□□□□ -1.86
MSN1YOL116W PRP42Q03776 544 aaKnown RBP3.46□□□□□ -1.86
MSN1YOL116W MLC2Q06580 163 aa3.46□□□□□ -1.86
MSN1YOL116W RAD34Q06665 692 aa3.46□□□□□ -1.86
MSN1YOL116W YOL114CQ12322 202 aa3.46□□□□□ -1.86
MSN1YOL116W SNU66Q12420 587 aaPredicted RBP3.46□□□□□ -1.86
MSN1YOL116W RVB2Q12464 471 aaKnown RBP3.46□□□□□ -1.86
MSN1YOL116W Q0010Q9ZZX9 128 aa3.46□□□□□ -1.86
MSN1YOL116W SWI1P09547 1314 aa3.45□□□□□ -1.86
MSN1YOL116W MIS1P09440 975 aaKnown RBP3.45□□□□□ -1.86
MSN1YOL116W MRP7P12687 371 aa3.45□□□□□ -1.86
MSN1YOL116W SIR1P21691 654 aa3.45□□□□□ -1.86
MSN1YOL116W MSH1P25846 959 aa3.45□□□□□ -1.86
MSN1YOL116W GCD7P32502 381 aaPredicted RBP3.45□□□□□ -1.86
MSN1YOL116W APE3P37302 537 aaKnown RBP3.45□□□□□ -1.86
MSN1YOL116W STT3P39007 718 aaKnown RBP3.45□□□□□ -1.86
MSN1YOL116W VPS27P40343 622 aaKnown RBP3.45□□□□□ -1.86
MSN1YOL116W YJR008WP47085 338 aa3.45□□□□□ -1.86
MSN1YOL116W VTC3Q02725 835 aa3.45□□□□□ -1.86
MSN1YOL116W LEA1Q08963 238 aaPredicted RBP3.45□□□□□ -1.86
MSN1YOL116W FLO11P08640 1367 aa3.45□□□□□ -1.86
MSN1YOL116W POL3P15436 1097 aa3.44□□□□□ -1.86
MSN1YOL116W PFK2P16862 959 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
MSN1YOL116W LCB1P25045 558 aaKnown RBP3.44□□□□□ -1.86
MSN1YOL116W LAC1P28496 418 aa3.44□□□□□ -1.86
MSN1YOL116W SCO2P38072 301 aa3.44□□□□□ -1.86
MSN1YOL116W APM3P38153 483 aa3.44□□□□□ -1.86
MSN1YOL116W TOM71P38825 639 aaKnown RBP3.44□□□□□ -1.86
MSN1YOL116W FLO5P38894 1075 aa3.44□□□□□ -1.86
MSN1YOL116W HIS6P40545 261 aa3.44□□□□□ -1.86
MSN1YOL116W IRC8P47046 822 aa3.44□□□□□ -1.86
MSN1YOL116W MET14Q02196 202 aa3.44□□□□□ -1.86
MSN1YOL116W IWR1Q07532 353 aaPredicted RBP3.44□□□□□ -1.86
MSN1YOL116W YDL144CQ07589 356 aa3.44□□□□□ -1.86
MSN1YOL116W GET3Q12154 354 aaKnown RBP3.44□□□□□ -1.86
MSN1YOL116W HER1Q12276 1246 aa3.44□□□□□ -1.86
MSN1YOL116W SSK22P25390 1331 aaPredicted RBP3.44□□□□□ -1.86
MSN1YOL116W POM152P39685 1337 aa3.44□□□□□ -1.86
MSN1YOL116W PTP2P29461 750 aa3.43□□□□□ -1.86
MSN1YOL116W RAD24P32641 659 aa3.43□□□□□ -1.86
MSN1YOL116W HES1P35843 434 aa3.43□□□□□ -1.86
MSN1YOL116W ERC1P38767 581 aa3.43□□□□□ -1.86
MSN1YOL116W YJL107CP42947 387 aa3.43□□□□□ -1.86
MSN1YOL116W NPA3P47122 385 aa3.43□□□□□ -1.86
MSN1YOL116W YRB30P53107 440 aaPredicted RBP3.43□□□□□ -1.86
MSN1YOL116W RRT6P53117 311 aaPredicted RBP3.43□□□□□ -1.86
MSN1YOL116W UBX2Q04228 584 aa3.43□□□□□ -1.86
MSN1YOL116W RBA50Q04418 439 aa3.43□□□□□ -1.86
MSN1YOL116W ICL2Q12031 575 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms