RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C THI22Q06490 572 aa3.49□□□□□ -1.85
HRD1YOL013C TMA16Q08687 178 aa3.49□□□□□ -1.85
HRD1YOL013C RCN2Q12044 265 aa3.49□□□□□ -1.85
HRD1YOL013C USV1Q12132 391 aa3.49□□□□□ -1.85
HRD1YOL013C TUP1P16649 713 aa3.49□□□□□ -1.85
HRD1YOL013C URA7P28274 579 aaKnown RBP3.49□□□□□ -1.85
HRD1YOL013C PRE2P30656 287 aaKnown RBP3.49□□□□□ -1.85
HRD1YOL013C SMI1P32566 505 aa3.49□□□□□ -1.85
HRD1YOL013C TFB1P32776 642 aa3.49□□□□□ -1.85
HRD1YOL013C BCS1P32839 456 aa3.49□□□□□ -1.85
HRD1YOL013C PPQ1P32945 549 aa3.49□□□□□ -1.85
HRD1YOL013C APE3P37302 537 aaKnown RBP3.49□□□□□ -1.85
HRD1YOL013C YBL029WP38201 376 aa3.49□□□□□ -1.85
HRD1YOL013C CRG1P38892 291 aaRIP-Chip data3.49□□□□□ -1.85not detected
HRD1YOL013C VFA1P40080 203 aa3.49□□□□□ -1.85
HRD1YOL013C PCL7P40186 285 aa3.49□□□□□ -1.85
HRD1YOL013C DOT5P40553 215 aa3.49□□□□□ -1.85
HRD1YOL013C THI6P41835 540 aa3.49□□□□□ -1.85
HRD1YOL013C BIT61P47041 543 aa3.49□□□□□ -1.85
HRD1YOL013C TCB2P48231 1178 aa3.49□□□□□ -1.85
HRD1YOL013C JJJ1P53863 590 aa3.49□□□□□ -1.85
HRD1YOL013C INN1P53901 409 aa3.49□□□□□ -1.85
HRD1YOL013C VPS9P54787 451 aa3.49□□□□□ -1.85
HRD1YOL013C ARX1Q03862 593 aaKnown RBP3.49□□□□□ -1.85
HRD1YOL013C RIX7Q07844 837 aaKnown RBP3.49□□□□□ -1.85
HRD1YOL013C GPM3Q12326 303 aa3.49□□□□□ -1.85
HRD1YOL013C CEX1Q12453 761 aa3.49□□□□□ -1.85
HRD1YOL013C SPE4Q12455 300 aa3.49□□□□□ -1.85
HRD1YOL013C BNR1P40450 1375 aa3.48□□□□□ -1.85
HRD1YOL013C CET1O13297 549 aaPredicted RBP3.48□□□□□ -1.85
HRD1YOL013C ATP2P00830 511 aaKnown RBP3.48□□□□□ -1.85
HRD1YOL013C RPC40P07703 335 aaKnown RBP3.48□□□□□ -1.85
HRD1YOL013C ERG20P08524 352 aaKnown RBP3.48□□□□□ -1.85
HRD1YOL013C PET122P10355 254 aa3.48□□□□□ -1.85
HRD1YOL013C SEC15P22224 910 aa3.48□□□□□ -1.85
HRD1YOL013C ADY2P25613 283 aa3.48□□□□□ -1.85
HRD1YOL013C RIB7P33312 244 aa3.48□□□□□ -1.85
HRD1YOL013C GMH1P36125 273 aa3.48□□□□□ -1.85
HRD1YOL013C SIF2P38262 535 aa3.48□□□□□ -1.85
HRD1YOL013C FTR1P40088 404 aa3.48□□□□□ -1.85
HRD1YOL013C RGI2P40188 164 aa3.48□□□□□ -1.85
HRD1YOL013C PFK26P40433 827 aaKnown RBP3.48□□□□□ -1.85
HRD1YOL013C DJP1P40564 432 aa3.48□□□□□ -1.85
HRD1YOL013C SSU1P41930 458 aa3.48□□□□□ -1.85
HRD1YOL013C FET5P43561 622 aa3.48□□□□□ -1.85
HRD1YOL013C FYV8P46949 817 aaKnown RBP3.48□□□□□ -1.85
HRD1YOL013C LYS4P49367 693 aaPredicted RBP3.48□□□□□ -1.85
HRD1YOL013C GLO1P50107 326 aa3.48□□□□□ -1.85
HRD1YOL013C NNF2P53253 936 aa3.48□□□□□ -1.85
HRD1YOL013C YNR068CP53754 272 aa3.48□□□□□ -1.85
HRD1YOL013C NGL2Q03264 515 aaKnown RBP3.48□□□□□ -1.85
HRD1YOL013C RPC11Q04307 110 aaPredicted RBP3.48□□□□□ -1.85
HRD1YOL013C MMR1Q06324 491 aa3.48□□□□□ -1.85
HRD1YOL013C ARO10Q06408 635 aa3.48□□□□□ -1.85
HRD1YOL013C AIM6Q07716 390 aa3.48□□□□□ -1.85
HRD1YOL013C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
HRD1YOL013C CHS5Q12114 671 aaKnown RBP3.48□□□□□ -1.85
HRD1YOL013C NBP2Q12163 236 aa3.48□□□□□ -1.85
HRD1YOL013C POM34Q12445 299 aa3.48□□□□□ -1.85
HRD1YOL013C NOP58Q12499 511 aaKnown RBP3.48□□□□□ -1.85
HRD1YOL013C VCX1Q99385 411 aa3.48□□□□□ -1.85
HRD1YOL013C FUB1P25659 250 aa3.47□□□□□ -1.85
HRD1YOL013C RPN2P32565 945 aaKnown RBP3.47□□□□□ -1.85
HRD1YOL013C PEX2P32800 271 aa3.47□□□□□ -1.85
HRD1YOL013C KTR3P38130 404 aaPredicted RBP3.47□□□□□ -1.85
HRD1YOL013C YHR097CP38809 366 aaKnown RBP3.47□□□□□ -1.85
HRD1YOL013C VPS41P38959 992 aa3.47□□□□□ -1.85
HRD1YOL013C TIF4631P39935 952 aaKnown RBP3.47□□□□□ -1.85
HRD1YOL013C YEL020CP39994 560 aa3.47□□□□□ -1.85
HRD1YOL013C RTT105P40063 208 aa3.47□□□□□ -1.85
HRD1YOL013C VPS4P52917 437 aa3.47□□□□□ -1.85
HRD1YOL013C TOF1P53840 1238 aa3.47□□□□□ -1.85
HRD1YOL013C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
HRD1YOL013C VPS64Q03944 604 aa3.47□□□□□ -1.85
HRD1YOL013C GTB1Q04924 702 aa3.47□□□□□ -1.85
HRD1YOL013C PML1Q07930 204 aaPredicted RBP3.47□□□□□ -1.85
HRD1YOL013C PWP1P21304 576 aaKnown RBP3.46□□□□□ -1.85
HRD1YOL013C EMP70P32802 667 aa3.46□□□□□ -1.85
HRD1YOL013C ADH5P38113 351 aaKnown RBP3.46□□□□□ -1.85
HRD1YOL013C REG2P38232 338 aa3.46□□□□□ -1.85
HRD1YOL013C MUP3P38734 546 aa3.46□□□□□ -1.85
HRD1YOL013C ARB1P40024 610 aaKnown RBP3.46□□□□□ -1.85
HRD1YOL013C AAD10P47182 288 aa3.46□□□□□ -1.85
HRD1YOL013C YGR151CP53287 111 aa3.46□□□□□ -1.85
HRD1YOL013C OGG1P53397 376 aaPredicted RBP3.46□□□□□ -1.85
HRD1YOL013C ALF1P53904 254 aa3.46□□□□□ -1.85
HRD1YOL013C VBA4Q04602 768 aaKnown RBP3.46□□□□□ -1.85
HRD1YOL013C DPB4Q04603 196 aaKnown RBP3.46□□□□□ -1.85
HRD1YOL013C COQ11Q05892 277 aa3.46□□□□□ -1.85
HRD1YOL013C SPE3Q12074 293 aaKnown RBP3.46□□□□□ -1.85
HRD1YOL013C PSY3Q12318 242 aa3.46□□□□□ -1.85
HRD1YOL013C PNO1Q99216 274 aaKnown RBP3.46□□□□□ -1.85
HRD1YOL013C MDH1P17505 334 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
HRD1YOL013C KIN82P25341 720 aa3.46□□□□□ -1.86
HRD1YOL013C FEN2P25621 512 aaKnown RBP3.46□□□□□ -1.86
HRD1YOL013C YCR051WP25631 222 aa3.46□□□□□ -1.86
HRD1YOL013C HEL1P36113 551 aa3.46□□□□□ -1.86
HRD1YOL013C UIP5P36137 443 aa3.46□□□□□ -1.86
HRD1YOL013C GEX2P36173 615 aa3.46□□□□□ -1.86
HRD1YOL013C MAL33P38157 468 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms