RNA–Protein interactions for RNA: YMR287C

DSS1, Transcript of 3'-5' exoribonuclease, yeast

Gene DSS1, Length 2,910 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSS1	YMR287C	SAP1	P39955	897 aa	Known RBP	4.06	□□□□□ -1.76
DSS1	YMR287C	IMD3	P50095	523 aa	Known RBP	4.06	□□□□□ -1.76
DSS1	YMR287C	MRK1	P50873	501 aa		4.06	□□□□□ -1.76
DSS1	YMR287C	YRB30	P53107	440 aa	Predicted RBP	4.06	□□□□□ -1.76
DSS1	YMR287C	YLR345W	Q06137	509 aa		4.06	□□□□□ -1.76
DSS1	YMR287C	CRN1	Q06440	651 aa		4.06	□□□□□ -1.76
DSS1	YMR287C	SWA2	Q06677	668 aa		4.06	□□□□□ -1.76
DSS1	YMR287C	CRT10	Q08226	957 aa		4.06	□□□□□ -1.76
DSS1	YMR287C	YPT6	Q99260	215 aa		4.06	□□□□□ -1.76
DSS1	YMR287C	AUR1	P36107	401 aa	Predicted RBP	4.06	□□□□□ -1.76
DSS1	YMR287C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
DSS1	YMR287C	APT1	P49435	187 aa	Known RBP	4.06	□□□□□ -1.76
DSS1	YMR287C	MSC1	Q03104	513 aa		4.06	□□□□□ -1.76
DSS1	YMR287C	WAR1	Q03631	944 aa		4.06	□□□□□ -1.76
DSS1	YMR287C	NOP58	Q12499	511 aa	Known RBP	4.06	□□□□□ -1.76
DSS1	YMR287C	YLR111W	Q12528	110 aa		4.06	□□□□□ -1.76
DSS1	YMR287C	CKA1	P15790	372 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	AAD3	P25612	363 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	SRO77	P38163	1010 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	CBR1	P38626	284 aa	Known RBP	4.05	□□□□□ -1.76
DSS1	YMR287C	QRI1	P43123	477 aa	Known RBP	4.05	□□□□□ -1.76
DSS1	YMR287C	SKG3	Q06315	1026 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	SPN1	Q06505	410 aa	Predicted RBP	4.05	□□□□□ -1.76
DSS1	YMR287C	YEH1	Q07804	573 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	ARG3	P05150	338 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	MET17	P06106	444 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	TPK2	P06245	380 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	LAC1	P28496	418 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	MRPL19	P53875	158 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	YNL144C	P53907	740 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	RSM28	Q03430	361 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	YML053C	Q04978	212 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	LYS21	Q12122	440 aa	Known RBP	4.05	□□□□□ -1.76
DSS1	YMR287C	SNU66	Q12420	587 aa	Predicted RBP	4.05	□□□□□ -1.76
DSS1	YMR287C	RPC53	P25441	422 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	SNU114	P36048	1008 aa	Known RBP	4.05	□□□□□ -1.76
DSS1	YMR287C	RPS10B	P46784	105 aa	Known RBP	4.05	□□□□□ -1.76
DSS1	YMR287C	TAH18	Q12181	623 aa		4.05	□□□□□ -1.76
DSS1	YMR287C	TIF3	P34167	436 aa	Known RBP	4.04	□□□□□ -1.76
DSS1	YMR287C	CST26	P38226	397 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	SEC31	P38968	1273 aa	Known RBP	4.04	□□□□□ -1.76
DSS1	YMR287C	ECM10	P39987	644 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	MET18	P40469	1032 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	IRC24	P40580	263 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	ROK1	P45818	564 aa	Predicted RBP	4.04	□□□□□ -1.76
DSS1	YMR287C	TAP42	Q04372	366 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	NCE102	Q12207	173 aa	RIP-Chip data	4.04	□□□□□ -1.76	not detected
DSS1	YMR287C	INH1	P01097	85 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	AQY1	P0CD91	305 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	PTC6	P25646	442 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	VPS41	P38959	992 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	YJL107C	P42947	387 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	DRN1	P53255	507 aa	Known RBP	4.04	□□□□□ -1.76
DSS1	YMR287C	NBP2	Q12163	236 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	SKM1	Q12469	655 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	YOR111W	Q99210	232 aa		4.04	□□□□□ -1.76
DSS1	YMR287C	STE12	P13574	688 aa		4.03	□□□□□ -1.76
DSS1	YMR287C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
DSS1	YMR287C	ELO2	P25358	347 aa		4.03	□□□□□ -1.76
DSS1	YMR287C	WBP1	P33767	430 aa	Known RBP	4.03	□□□□□ -1.76
DSS1	YMR287C	RPF2	P36160	344 aa	Known RBP	4.03	□□□□□ -1.76
DSS1	YMR287C	MUM2	P38236	366 aa		4.03	□□□□□ -1.76
DSS1	YMR287C	LEU5	P38702	357 aa		4.03	□□□□□ -1.76
DSS1	YMR287C	YEL020C	P39994	560 aa		4.03	□□□□□ -1.76
DSS1	YMR287C	YIL161W	P40449	235 aa	Known RBP	4.03	□□□□□ -1.76
DSS1	YMR287C	AXL1	P40851	1208 aa		4.03	□□□□□ -1.76
DSS1	YMR287C	GLO1	P50107	326 aa		4.03	□□□□□ -1.76
DSS1	YMR287C	YBR126W-A	Q8TGU7	68 aa		4.03	□□□□□ -1.76
DSS1	YMR287C	GCN4	P03069	281 aa		4.03	□□□□□ -1.76
DSS1	YMR287C	ARD1	P07347	238 aa	Predicted RBP	4.03	□□□□□ -1.76
DSS1	YMR287C	PIH1	P38768	344 aa		4.03	□□□□□ -1.76
DSS1	YMR287C	FAF1	P40546	346 aa	Predicted RBP	4.03	□□□□□ -1.76
DSS1	YMR287C	HBT1	Q07653	1046 aa	Known RBP	4.03	□□□□□ -1.76
DSS1	YMR287C	MDM20	Q12387	796 aa	Known RBP	4.03	□□□□□ -1.76
DSS1	YMR287C	RTC1	Q08281	1341 aa		4.03	□□□□□ -1.76
DSS1	YMR287C	CBS1	P14066	229 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	LCB1	P25045	558 aa	Known RBP	4.02	□□□□□ -1.77
DSS1	YMR287C	POL4	P25615	582 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	UGP1	P32861	499 aa	Known RBP	4.02	□□□□□ -1.77
DSS1	YMR287C	SEC66	P33754	206 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	LAS21	P40367	830 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	CTK2	P46962	323 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	LEA1	Q08963	238 aa	Predicted RBP	4.02	□□□□□ -1.77
DSS1	YMR287C	RTN2	Q12443	393 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	STE50	P25344	346 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	CIN1	P40987	1014 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	SKP2	P42843	763 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	VTC2	P43585	828 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	COG2	P53271	262 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	MDG1	P53885	366 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	YLR287C	Q05881	355 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	MRD1	Q06106	887 aa	Known RBP	4.02	□□□□□ -1.77
DSS1	YMR287C	RPS10A	Q08745	105 aa	Predicted RBP	4.02	□□□□□ -1.77
DSS1	YMR287C	BUD7	Q08754	746 aa		4.02	□□□□□ -1.77
DSS1	YMR287C	HOM3	P10869	527 aa		4.01	□□□□□ -1.77
DSS1	YMR287C	SGV1	P23293	657 aa	Known RBP	4.01	□□□□□ -1.77
DSS1	YMR287C	YFR020W	P43600	232 aa		4.01	□□□□□ -1.77
DSS1	YMR287C	HOS2	P53096	452 aa	Predicted RBP	4.01	□□□□□ -1.77
DSS1	YMR287C	YDR109C	Q04585	715 aa		4.01	□□□□□ -1.77
DSS1	YMR287C	IRC10	Q08118	586 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms