RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W LEU5P38702 357 aa3.74□□□□□ -1.81
UBP8YMR223W IES5P40060 125 aa3.74□□□□□ -1.81
UBP8YMR223W DJP1P40564 432 aa3.74□□□□□ -1.81
UBP8YMR223W ASK10P48361 1146 aa3.74□□□□□ -1.81
UBP8YMR223W ATG23Q06671 453 aa3.74□□□□□ -1.81
UBP8YMR223W ARP7Q12406 477 aa3.74□□□□□ -1.81
UBP8YMR223W PMS1P14242 873 aa3.73□□□□□ -1.81
UBP8YMR223W PRP16P15938 1071 aaPredicted RBP3.73□□□□□ -1.81
UBP8YMR223W URK1P27515 501 aa3.73□□□□□ -1.81
UBP8YMR223W FAF1P40546 346 aaPredicted RBP3.73□□□□□ -1.81
UBP8YMR223W ROK1P45818 564 aaPredicted RBP3.73□□□□□ -1.81
UBP8YMR223W YJR120WP47157 116 aa3.73□□□□□ -1.81
UBP8YMR223W PEX14P53112 341 aa3.73□□□□□ -1.81
UBP8YMR223W UTP21Q06078 939 aaPredicted RBP3.73□□□□□ -1.81
UBP8YMR223W YLR352WQ06479 807 aa3.73□□□□□ -1.81
UBP8YMR223W YLR049CQ12110 428 aa3.73□□□□□ -1.81
UBP8YMR223W TFC4P33339 1025 aa3.72□□□□□ -1.81
UBP8YMR223W YPK3P38070 525 aa3.72□□□□□ -1.81
UBP8YMR223W BUD16P39988 312 aa3.72□□□□□ -1.81
UBP8YMR223W FCP1Q03254 732 aa3.72□□□□□ -1.81
UBP8YMR223W ICL2Q12031 575 aa3.72□□□□□ -1.81
UBP8YMR223W PCT1P13259 424 aa3.71□□□□□ -1.82
UBP8YMR223W GUK1P15454 187 aaKnown RBP3.71□□□□□ -1.82
UBP8YMR223W CAB2P40506 365 aa3.71□□□□□ -1.82
UBP8YMR223W MDM1Q01846 1127 aa3.71□□□□□ -1.82
UBP8YMR223W MCM3P24279 971 aaKnown RBP3.7□□□□□ -1.82
UBP8YMR223W PES4P39684 611 aa3.7□□□□□ -1.82
UBP8YMR223W ATG21Q02887 496 aa3.7□□□□□ -1.82
UBP8YMR223W MTG1Q03151 367 aaPredicted RBP3.7□□□□□ -1.82
UBP8YMR223W VMS1Q04311 632 aaKnown RBP3.7□□□□□ -1.82
UBP8YMR223W SMA2Q04658 369 aa3.7□□□□□ -1.82
UBP8YMR223W RSF1Q05043 376 aa3.7□□□□□ -1.82
UBP8YMR223W YER145C-AA0A023PYF4 145 aa3.7□□□□□ -1.82
UBP8YMR223W FOB1O13329 566 aa3.7□□□□□ -1.82
UBP8YMR223W SIR1P21691 654 aa3.7□□□□□ -1.82
UBP8YMR223W STE50P25344 346 aa3.7□□□□□ -1.82
UBP8YMR223W MGR1P25573 417 aa3.7□□□□□ -1.82
UBP8YMR223W MUM2P38236 366 aa3.7□□□□□ -1.82
UBP8YMR223W ASI1P54074 624 aa3.7□□□□□ -1.82
UBP8YMR223W ADE16P54113 591 aaKnown RBP3.7□□□□□ -1.82
UBP8YMR223W ARP10Q04549 284 aa3.7□□□□□ -1.82
UBP8YMR223W MCP2Q06567 569 aa3.7□□□□□ -1.82
UBP8YMR223W YBR298C-AQ8TGK4 73 aa3.7□□□□□ -1.82
UBP8YMR223W BIK1P11709 440 aa3.69□□□□□ -1.82
UBP8YMR223W MSH1P25846 959 aa3.69□□□□□ -1.82
UBP8YMR223W SWI3P32591 825 aa3.69□□□□□ -1.82
UBP8YMR223W STT3P39007 718 aaKnown RBP3.69□□□□□ -1.82
UBP8YMR223W IAH1P41734 238 aa3.69□□□□□ -1.82
UBP8YMR223W DCP2P53550 970 aaKnown RBP3.69□□□□□ -1.82
UBP8YMR223W YNL234WP53857 426 aa3.69□□□□□ -1.82
UBP8YMR223W TGL2P54857 326 aa3.69□□□□□ -1.82
UBP8YMR223W CTL1Q03220 320 aaKnown RBP3.69□□□□□ -1.82
UBP8YMR223W TLG1Q03322 224 aa3.69□□□□□ -1.82
UBP8YMR223W NYV1Q12255 253 aa3.69□□□□□ -1.82
UBP8YMR223W TMA7Q3E764 64 aaKnown RBP3.69□□□□□ -1.82
UBP8YMR223W DPB3P27344 201 aa3.68□□□□□ -1.82
UBP8YMR223W YJR061WP40355 935 aa3.68□□□□□ -1.82
UBP8YMR223W GRX3Q03835 250 aa3.68□□□□□ -1.82
UBP8YMR223W MPD2Q99316 277 aa3.68□□□□□ -1.82
UBP8YMR223W CYB2P00175 591 aa3.67□□□□□ -1.82
UBP8YMR223W PET122P10355 254 aa3.67□□□□□ -1.82
UBP8YMR223W BAR1P12630 587 aa3.67□□□□□ -1.82
UBP8YMR223W PGI1P12709 554 aaKnown RBP3.67□□□□□ -1.82
UBP8YMR223W YEF3P16521 1044 aaKnown RBP3.67□□□□□ -1.82
UBP8YMR223W CPR3P25719 182 aa3.67□□□□□ -1.82
UBP8YMR223W PRO3P32263 286 aaKnown RBP3.67□□□□□ -1.82
UBP8YMR223W TRS65P32893 560 aa3.67□□□□□ -1.82
UBP8YMR223W RIM2P38127 377 aa3.67□□□□□ -1.82
UBP8YMR223W DED81P38707 554 aaKnown RBP3.67□□□□□ -1.82
UBP8YMR223W YIR014WP40570 242 aa3.67□□□□□ -1.82
UBP8YMR223W CEG1Q01159 459 aaPredicted RBP3.67□□□□□ -1.82
UBP8YMR223W RSA1Q08932 381 aa3.67□□□□□ -1.82
UBP8YMR223W DAP1Q12091 152 aa3.67□□□□□ -1.82
UBP8YMR223W RRI2Q12348 645 aa3.67□□□□□ -1.82
UBP8YMR223W TY1B-AO13527 1196 aaKnown RBP3.66□□□□□ -1.82
UBP8YMR223W LRE1P25579 583 aaKnown RBP3.66□□□□□ -1.82
UBP8YMR223W TFC3P34111 1160 aa3.66□□□□□ -1.82
UBP8YMR223W SMA1Q02651 245 aa3.66□□□□□ -1.82
UBP8YMR223W GRC3Q07845 632 aa3.66□□□□□ -1.82
UBP8YMR223W SUL2Q12325 893 aa3.66□□□□□ -1.82
UBP8YMR223W INH1P01097 85 aa3.65□□□□□ -1.83
UBP8YMR223W ATP4P05626 244 aa3.65□□□□□ -1.83
UBP8YMR223W HOM3P10869 527 aa3.65□□□□□ -1.83
UBP8YMR223W YSP3P25036 478 aa3.65□□□□□ -1.83
UBP8YMR223W GCD7P32502 381 aaPredicted RBP3.65□□□□□ -1.83
UBP8YMR223W PDR3P33200 976 aa3.65□□□□□ -1.83
UBP8YMR223W EXO84P38261 753 aa3.65□□□□□ -1.83
UBP8YMR223W NDE1P40215 560 aa3.65□□□□□ -1.83
UBP8YMR223W MAD3P47074 515 aa3.65□□□□□ -1.83
UBP8YMR223W BNA1P47096 177 aa3.65□□□□□ -1.83
UBP8YMR223W YMR178WQ03219 274 aaKnown RBP3.65□□□□□ -1.83
UBP8YMR223W EIS1Q05050 843 aaKnown RBP3.65□□□□□ -1.83
UBP8YMR223W PSR1Q07800 427 aa3.65□□□□□ -1.83
UBP8YMR223W YOL087CQ99247 1116 aa3.65□□□□□ -1.83
UBP8YMR223W YML003WP0CF16 290 aa3.64□□□□□ -1.83
UBP8YMR223W SST2P11972 698 aaKnown RBP3.64□□□□□ -1.83
UBP8YMR223W RFA2P26754 273 aaKnown RBP3.64□□□□□ -1.83
UBP8YMR223W ADE17P38009 592 aaKnown RBP3.64□□□□□ -1.83
UBP8YMR223W MEP1P40260 492 aa3.64□□□□□ -1.83
UBP8YMR223W IMA1P53051 589 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms