RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W AAP1P37898 856 aaKnown RBP5.26□□□□□ -1.57
VPS36YLR417W MAL33P38157 468 aa5.26□□□□□ -1.57
VPS36YLR417W MOH1P38191 138 aa5.26□□□□□ -1.57
VPS36YLR417W YNG2P38806 282 aaKnown RBP5.26□□□□□ -1.57
VPS36YLR417W SEC24P40482 926 aaKnown RBP5.26□□□□□ -1.57
VPS36YLR417W SWP82P43554 623 aa5.26□□□□□ -1.57
VPS36YLR417W HRD3Q05787 833 aa5.26□□□□□ -1.57
VPS36YLR417W GPN2Q08726 347 aaPredicted RBP5.26□□□□□ -1.57
VPS36YLR417W OCA4P25366 362 aa5.26□□□□□ -1.57
VPS36YLR417W PEP3P27801 918 aa5.26□□□□□ -1.57
VPS36YLR417W NTR2P36118 322 aaPredicted RBP5.26□□□□□ -1.57
VPS36YLR417W SEC31P38968 1273 aaKnown RBP5.26□□□□□ -1.57
VPS36YLR417W TDA10P42938 290 aa5.26□□□□□ -1.57
VPS36YLR417W YGL036WP53185 909 aaPredicted RBP5.26□□□□□ -1.57
VPS36YLR417W ADE16P54113 591 aaKnown RBP5.26□□□□□ -1.57
VPS36YLR417W ARG7Q04728 441 aa5.26□□□□□ -1.57
VPS36YLR417W MRH1Q12117 320 aaPredicted RBP5.26□□□□□ -1.57
VPS36YLR417W STE12P13574 688 aa5.25□□□□□ -1.57
VPS36YLR417W PDB1P32473 366 aaKnown RBP5.25□□□□□ -1.57
VPS36YLR417W KES1P35844 434 aaKnown RBP5.25□□□□□ -1.57
VPS36YLR417W RKM3P38222 552 aa5.25□□□□□ -1.57
VPS36YLR417W RGI2P40188 164 aa5.25□□□□□ -1.57
VPS36YLR417W RPN11P43588 306 aaKnown RBP5.25□□□□□ -1.57
VPS36YLR417W GLO1P50107 326 aa5.25□□□□□ -1.57
VPS36YLR417W GND2P53319 492 aa5.25□□□□□ -1.57
VPS36YLR417W YNL058CP53947 316 aa5.25□□□□□ -1.57
VPS36YLR417W YPL071CQ02864 156 aa5.25□□□□□ -1.57
VPS36YLR417W GIS1Q03833 894 aa5.25□□□□□ -1.57
VPS36YLR417W RRG1Q12167 365 aaPredicted RBP5.25□□□□□ -1.57
VPS36YLR417W SFI1Q12369 946 aa5.25□□□□□ -1.57
VPS36YLR417W PCT1P13259 424 aa5.24□□□□□ -1.57
VPS36YLR417W CBS1P14066 229 aa5.24□□□□□ -1.57
VPS36YLR417W RED1P14291 827 aa5.24□□□□□ -1.57
VPS36YLR417W YJU2P28320 278 aaPredicted RBP5.24□□□□□ -1.57
VPS36YLR417W AGP2P38090 596 aa5.24□□□□□ -1.57
VPS36YLR417W ASG1P40467 964 aa5.24□□□□□ -1.57
VPS36YLR417W SPO22P40511 975 aa5.24□□□□□ -1.57
VPS36YLR417W TMN2Q04562 672 aa5.24□□□□□ -1.57
VPS36YLR417W PSR1Q07800 427 aa5.24□□□□□ -1.57
VPS36YLR417W POL4P25615 582 aa5.23□□□□□ -1.57
VPS36YLR417W UGP1P32861 499 aaKnown RBP5.23□□□□□ -1.57
VPS36YLR417W MTH1P35198 433 aa5.23□□□□□ -1.57
VPS36YLR417W UBP13P38187 747 aa5.23□□□□□ -1.57
VPS36YLR417W MRX1P40050 688 aa5.23□□□□□ -1.57
VPS36YLR417W SLI1P53304 468 aa5.23□□□□□ -1.57
VPS36YLR417W RSM28Q03430 361 aa5.23□□□□□ -1.57
VPS36YLR417W SPN1Q06505 410 aaPredicted RBP5.23□□□□□ -1.57
VPS36YLR417W YEH1Q07804 573 aa5.23□□□□□ -1.57
VPS36YLR417W INO80P53115 1489 aa5.23□□□□□ -1.57
VPS36YLR417W RPN13O13563 156 aa5.23□□□□□ -1.57
VPS36YLR417W MET17P06106 444 aa5.23□□□□□ -1.57
VPS36YLR417W LCB1P25045 558 aaKnown RBP5.23□□□□□ -1.57
VPS36YLR417W SAT4P25333 603 aaKnown RBP5.23□□□□□ -1.57
VPS36YLR417W PTC6P25646 442 aa5.23□□□□□ -1.57
VPS36YLR417W SOF1P33750 489 aaKnown RBP5.23□□□□□ -1.57
VPS36YLR417W EXO1P39875 702 aa5.23□□□□□ -1.57
VPS36YLR417W LYS4P49367 693 aaPredicted RBP5.23□□□□□ -1.57
VPS36YLR417W VPS73P53142 486 aaKnown RBP5.23□□□□□ -1.57
VPS36YLR417W LEA1Q08963 238 aaPredicted RBP5.23□□□□□ -1.57
VPS36YLR417W YPL272CQ08984 517 aa5.23□□□□□ -1.57
VPS36YLR417W SPE4Q12455 300 aa5.23□□□□□ -1.57
VPS36YLR417W ILV2P07342 687 aaKnown RBP5.22□□□□□ -1.57
VPS36YLR417W ROX1P25042 368 aa5.22□□□□□ -1.57
VPS36YLR417W AAD3P25612 363 aa5.22□□□□□ -1.57
VPS36YLR417W ERG3P32353 365 aa5.22□□□□□ -1.57
VPS36YLR417W EMP70P32802 667 aa5.22□□□□□ -1.57
VPS36YLR417W LHS1P36016 881 aa5.22□□□□□ -1.57
VPS36YLR417W STR3P53101 465 aaKnown RBP5.22□□□□□ -1.57
VPS36YLR417W IST1P53843 298 aaPredicted RBP5.22□□□□□ -1.57
VPS36YLR417W YJR112W-AQ3E743 109 aa5.22□□□□□ -1.57
VPS36YLR417W YGR066CP53242 292 aa5.21□□□□□ -1.58
VPS36YLR417W YML037CQ03703 340 aa5.21□□□□□ -1.58
VPS36YLR417W ULA1Q12059 462 aa5.21□□□□□ -1.58
VPS36YLR417W PGA3Q12746 312 aaKnown RBP5.21□□□□□ -1.58
VPS36YLR417W HEM1P09950 548 aaPredicted RBP5.2□□□□□ -1.58
VPS36YLR417W VMA16P23968 213 aa5.2□□□□□ -1.58
VPS36YLR417W YIH1P25637 258 aa5.2□□□□□ -1.58
VPS36YLR417W RPC34P32910 317 aa5.2□□□□□ -1.58
VPS36YLR417W REG2P38232 338 aa5.2□□□□□ -1.58
VPS36YLR417W DIA4P38705 446 aaPredicted RBP5.2□□□□□ -1.58
VPS36YLR417W YEL020CP39994 560 aa5.2□□□□□ -1.58
VPS36YLR417W MRK1P50873 501 aa5.2□□□□□ -1.58
VPS36YLR417W BUD22Q04347 519 aaKnown RBP5.2□□□□□ -1.58
VPS36YLR417W CYK3Q07533 885 aa5.2□□□□□ -1.58
VPS36YLR417W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
VPS36YLR417W HXK2P04807 486 aaKnown RBP5.2□□□□□ -1.58
VPS36YLR417W DFR1P07807 211 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
VPS36YLR417W PWP1P21304 576 aaKnown RBP5.2□□□□□ -1.58
VPS36YLR417W YMC1P32331 307 aa5.2□□□□□ -1.58
VPS36YLR417W ORC2P32833 620 aa5.2□□□□□ -1.58
VPS36YLR417W YKL050CP35736 922 aa5.2□□□□□ -1.58
VPS36YLR417W BYE1P36106 594 aa5.2□□□□□ -1.58
VPS36YLR417W ECM10P39987 644 aa5.2□□□□□ -1.58
VPS36YLR417W BUR6P40096 142 aa5.2□□□□□ -1.58
VPS36YLR417W MET28P40573 187 aa5.2□□□□□ -1.58
VPS36YLR417W ROK1P45818 564 aaPredicted RBP5.2□□□□□ -1.58
VPS36YLR417W RAD34Q06665 692 aa5.2□□□□□ -1.58
VPS36YLR417W IRC10Q08118 586 aa5.2□□□□□ -1.58
VPS36YLR417W PNS1Q12412 539 aa5.2□□□□□ -1.58
VPS36YLR417W YPT6Q99260 215 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms