RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	CHS6	P40955	746 aa		4.8	□□□□□ -1.64
APS1	YLR170C	MIC19	P43594	170 aa		4.8	□□□□□ -1.64
APS1	YLR170C	AIM23	P47015	356 aa		4.8	□□□□□ -1.64
APS1	YLR170C	AMA1	P50082	593 aa		4.8	□□□□□ -1.64
APS1	YLR170C	NUP84	P52891	726 aa		4.8	□□□□□ -1.64
APS1	YLR170C	VEL1	P53058	206 aa		4.8	□□□□□ -1.64
APS1	YLR170C	PCL10	P53124	433 aa		4.8	□□□□□ -1.64
APS1	YLR170C	YGR127W	P53275	312 aa		4.8	□□□□□ -1.64
APS1	YLR170C	YTP1	P53584	459 aa		4.8	□□□□□ -1.64
APS1	YLR170C	LSC1	P53598	329 aa	Known RBP	4.8	□□□□□ -1.64
APS1	YLR170C	YNR063W	P53749	607 aa		4.8	□□□□□ -1.64
APS1	YLR170C	PRM1	P53835	661 aa		4.8	□□□□□ -1.64
APS1	YLR170C	RRB1	Q04225	511 aa	Known RBP	4.8	□□□□□ -1.64
APS1	YLR170C	YCS4	Q06156	1176 aa		4.8	□□□□□ -1.64
APS1	YLR170C	PGC1	Q08959	321 aa		4.8	□□□□□ -1.64
APS1	YLR170C	ACM1	Q08981	209 aa		4.8	□□□□□ -1.64
APS1	YLR170C	HOS1	Q12214	470 aa		4.8	□□□□□ -1.64
APS1	YLR170C	PEX11	Q12462	236 aa		4.8	□□□□□ -1.64
APS1	YLR170C	ILS1	P09436	1072 aa	Known RBP	4.79	□□□□□ -1.64
APS1	YLR170C	ADH4	P10127	382 aa		4.79	□□□□□ -1.64
APS1	YLR170C	GID7	P25569	745 aa		4.79	□□□□□ -1.64
APS1	YLR170C	PYC2	P32327	1180 aa	Known RBP	4.79	□□□□□ -1.64
APS1	YLR170C	HEM12	P32347	362 aa	Predicted RBP	4.79	□□□□□ -1.64
APS1	YLR170C	MRPL40	P36534	297 aa		4.79	□□□□□ -1.64
APS1	YLR170C	SMX2	P40204	77 aa	Known RBP	4.79	□□□□□ -1.64
APS1	YLR170C	INA22	P40576	216 aa		4.79	□□□□□ -1.64
APS1	YLR170C	SET2	P46995	733 aa	Known RBP	4.79	□□□□□ -1.64
APS1	YLR170C	PYK2	P52489	506 aa	Known RBP	4.79	□□□□□ -1.64
APS1	YLR170C	AIM14	P53109	570 aa		4.79	□□□□□ -1.64
APS1	YLR170C	IMP4	P53941	290 aa	Known RBP	4.79	□□□□□ -1.64
APS1	YLR170C	SHR3	Q02774	210 aa		4.79	□□□□□ -1.64
APS1	YLR170C	INA17	Q02888	182 aa		4.79	□□□□□ -1.64
APS1	YLR170C	PIR1	Q03178	341 aa		4.79	□□□□□ -1.64
APS1	YLR170C	YMR027W	Q04371	470 aa		4.79	□□□□□ -1.64
APS1	YLR170C	TDA5	Q06417	326 aa	Known RBP	4.79	□□□□□ -1.64
APS1	YLR170C	SLD7	Q08457	257 aa		4.79	□□□□□ -1.64
APS1	YLR170C	SFI1	Q12369	946 aa		4.79	□□□□□ -1.64
APS1	YLR170C	FRT1	Q99332	602 aa		4.79	□□□□□ -1.64
APS1	YLR170C	HSP60	P19882	572 aa	Known RBP	4.78	□□□□□ -1.64
APS1	YLR170C	CLN1	P20437	546 aa		4.78	□□□□□ -1.64
APS1	YLR170C	MGT1	P26188	188 aa		4.78	□□□□□ -1.64
APS1	YLR170C	SPP381	P38282	291 aa	Predicted RBP	4.78	□□□□□ -1.64
APS1	YLR170C	SEO1	P39709	593 aa		4.78	□□□□□ -1.64
APS1	YLR170C	CNN1	P43618	361 aa		4.78	□□□□□ -1.64
APS1	YLR170C	ASN2	P49090	572 aa	Known RBP	4.78	□□□□□ -1.64
APS1	YLR170C	PRP31	P49704	494 aa	Predicted RBP	4.78	□□□□□ -1.64
APS1	YLR170C	COG1	P53079	417 aa		4.78	□□□□□ -1.64
APS1	YLR170C	YNR065C	P53751	1116 aa		4.78	□□□□□ -1.64
APS1	YLR170C	SIW14	P53965	281 aa		4.78	□□□□□ -1.64
APS1	YLR170C	RLI1	Q03195	608 aa	Known RBP	4.78	□□□□□ -1.64
APS1	YLR170C	YMR160W	Q03823	816 aa		4.78	□□□□□ -1.64
APS1	YLR170C	LDB18	Q07887	179 aa		4.78	□□□□□ -1.64
APS1	YLR170C	RMD5	Q12508	421 aa		4.78	□□□□□ -1.64
APS1	YLR170C	YOR338W	Q99326	363 aa		4.78	□□□□□ -1.64
APS1	YLR170C	TY4B-P	A0A0B7P3V8	1104 aa		4.77	□□□□□ -1.65
APS1	YLR170C	ILV2	P07342	687 aa	Known RBP	4.77	□□□□□ -1.65
APS1	YLR170C	HSF1	P10961	833 aa		4.77	□□□□□ -1.65
APS1	YLR170C	SPO16	P17122	198 aa		4.77	□□□□□ -1.65
APS1	YLR170C	DAL81	P21657	970 aa		4.77	□□□□□ -1.65
APS1	YLR170C	MNE1	P24720	663 aa		4.77	□□□□□ -1.65
APS1	YLR170C	URA7	P28274	579 aa	Known RBP	4.77	□□□□□ -1.65
APS1	YLR170C	AEP1	P32493	518 aa		4.77	□□□□□ -1.65
APS1	YLR170C	PMT1	P33775	817 aa		4.77	□□□□□ -1.65
APS1	YLR170C	TGL4	P36165	910 aa		4.77	□□□□□ -1.65
APS1	YLR170C	MNN1	P39106	762 aa		4.77	□□□□□ -1.65
APS1	YLR170C	RPH1	P39956	796 aa		4.77	□□□□□ -1.65
APS1	YLR170C	UBP7	P40453	1071 aa		4.77	□□□□□ -1.65
APS1	YLR170C	ROK1	P45818	564 aa	Predicted RBP	4.77	□□□□□ -1.65
APS1	YLR170C	YNR061C	P53747	219 aa		4.77	□□□□□ -1.65
APS1	YLR170C	YNL058C	P53947	316 aa		4.77	□□□□□ -1.65
APS1	YLR170C	COG6	P53959	839 aa		4.77	□□□□□ -1.65
APS1	YLR170C	CDC14	Q00684	551 aa		4.77	□□□□□ -1.65
APS1	YLR170C	YDR131C	Q03899	556 aa		4.77	□□□□□ -1.65
APS1	YLR170C	YDR132C	Q03900	495 aa		4.77	□□□□□ -1.65
APS1	YLR170C	TY4A-H	Q6Q5P6	413 aa		4.77	□□□□□ -1.65
APS1	YLR170C	MEX67	Q99257	599 aa	Known RBP	4.77	□□□□□ -1.65
APS1	YLR170C	YLR149C	Q99296	730 aa		4.77	□□□□□ -1.65
APS1	YLR170C	MSF1	P08425	469 aa		4.76	□□□□□ -1.65
APS1	YLR170C	GPA2	P10823	449 aa		4.76	□□□□□ -1.65
APS1	YLR170C	SCH9	P11792	824 aa	Known RBP	4.76	□□□□□ -1.65
APS1	YLR170C	SST2	P11972	698 aa	Known RBP	4.76	□□□□□ -1.65
APS1	YLR170C	EMC1	P25574	760 aa		4.76	□□□□□ -1.65
APS1	YLR170C	KAR4	P25583	335 aa		4.76	□□□□□ -1.65
APS1	YLR170C	URA10	P30402	227 aa		4.76	□□□□□ -1.65
APS1	YLR170C	ECM32	P32644	1121 aa	Known RBP	4.76	□□□□□ -1.65
APS1	YLR170C	STE13	P33894	931 aa		4.76	□□□□□ -1.65
APS1	YLR170C	LRG1	P35688	1017 aa		4.76	□□□□□ -1.65
APS1	YLR170C	PHO11	P35842	467 aa		4.76	□□□□□ -1.65
APS1	YLR170C	KES1	P35844	434 aa	Known RBP	4.76	□□□□□ -1.65
APS1	YLR170C	RPC37	P36121	282 aa		4.76	□□□□□ -1.65
APS1	YLR170C	PHO12	P38693	467 aa		4.76	□□□□□ -1.65
APS1	YLR170C	SMF2	P38778	549 aa		4.76	□□□□□ -1.65
APS1	YLR170C	MED6	P38782	295 aa		4.76	□□□□□ -1.65
APS1	YLR170C	SIP4	P46954	829 aa		4.76	□□□□□ -1.65
APS1	YLR170C	GLG2	P47011	380 aa		4.76	□□□□□ -1.65
APS1	YLR170C	RIM21	P48565	533 aa		4.76	□□□□□ -1.65
APS1	YLR170C	BIO5	P53744	561 aa	Known RBP	4.76	□□□□□ -1.65
APS1	YLR170C	NOP15	P53927	220 aa	Predicted RBP	4.76	□□□□□ -1.65
APS1	YLR170C	RSC4	Q02206	625 aa		4.76	□□□□□ -1.65
APS1	YLR170C	NUP100	Q02629	959 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms