RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C UBP13P38187 747 aa3.67□□□□□ -1.82
YPT52YKR014C RKM3P38222 552 aa3.67□□□□□ -1.82
YPT52YKR014C ARC40P38328 384 aaKnown RBP3.67□□□□□ -1.82
YPT52YKR014C SEC31P38968 1273 aaKnown RBP3.67□□□□□ -1.82
YPT52YKR014C UME6P39001 836 aa3.67□□□□□ -1.82
YPT52YKR014C PCL6P40038 420 aa3.67□□□□□ -1.82
YPT52YKR014C YIL169CP40442 995 aa3.67□□□□□ -1.82
YPT52YKR014C YIL152WP40455 235 aa3.67□□□□□ -1.82
YPT52YKR014C SAD1P43589 448 aa3.67□□□□□ -1.82
YPT52YKR014C CSL4P53859 292 aaPredicted RBP3.67□□□□□ -1.82
YPT52YKR014C IZH1Q03419 316 aa3.67□□□□□ -1.82
YPT52YKR014C YMR034CQ05131 434 aaPredicted RBP3.67□□□□□ -1.82
YPT52YKR014C CSR1Q06705 408 aaKnown RBP3.67□□□□□ -1.82
YPT52YKR014C TMA16Q08687 178 aa3.67□□□□□ -1.82
YPT52YKR014C YLR112WQ12130 139 aa3.67□□□□□ -1.82
YPT52YKR014C YER145C-AA0A023PYF4 145 aa3.66□□□□□ -1.82
YPT52YKR014C TY2A-LR1P0C2J4 438 aa3.66□□□□□ -1.82
YPT52YKR014C RPL42AP0CX27 106 aaKnown RBP3.66□□□□□ -1.82
YPT52YKR014C RPL42BP0CX28 106 aaKnown RBP3.66□□□□□ -1.82
YPT52YKR014C TY2A-FP0CX61 438 aa3.66□□□□□ -1.82
YPT52YKR014C TY2A-GR2P0CX62 438 aa3.66□□□□□ -1.82
YPT52YKR014C MTF2P10849 440 aa3.66□□□□□ -1.82
YPT52YKR014C UBC1P21734 215 aaKnown RBP3.66□□□□□ -1.82
YPT52YKR014C TY2A-CP25383 438 aa3.66□□□□□ -1.82
YPT52YKR014C MET30P39014 640 aa3.66□□□□□ -1.82
YPT52YKR014C YAT2P40017 923 aa3.66□□□□□ -1.82
YPT52YKR014C YNL234WP53857 426 aa3.66□□□□□ -1.82
YPT52YKR014C TY2A-DR2Q03483 438 aa3.66□□□□□ -1.82
YPT52YKR014C UTP21Q06078 939 aaPredicted RBP3.66□□□□□ -1.82
YPT52YKR014C MCP2Q06567 569 aa3.66□□□□□ -1.82
YPT52YKR014C TY2A-BQ12260 438 aa3.66□□□□□ -1.82
YPT52YKR014C TY2A-OR2Q12293 438 aa3.66□□□□□ -1.82
YPT52YKR014C TY2A-DR1Q12392 438 aa3.66□□□□□ -1.82
YPT52YKR014C TY2A-OR1Q12439 438 aa3.66□□□□□ -1.82
YPT52YKR014C TY2A-DR3Q99303 438 aa3.66□□□□□ -1.82
YPT52YKR014C CBP1P07252 654 aa3.65□□□□□ -1.83
YPT52YKR014C RAP1P11938 827 aa3.65□□□□□ -1.83
YPT52YKR014C SRP54P20424 541 aaKnown RBP3.65□□□□□ -1.83
YPT52YKR014C YCR043CP25361 127 aa3.65□□□□□ -1.83
YPT52YKR014C SRB5P32585 307 aa3.65□□□□□ -1.83
YPT52YKR014C GCS1P35197 352 aa3.65□□□□□ -1.83
YPT52YKR014C TEF4P36008 412 aaKnown RBP3.65□□□□□ -1.83
YPT52YKR014C NTR2P36118 322 aaPredicted RBP3.65□□□□□ -1.83
YPT52YKR014C TES1P41903 349 aaKnown RBP3.65□□□□□ -1.83
YPT52YKR014C ARC35P53731 342 aaKnown RBP3.65□□□□□ -1.83
YPT52YKR014C VMS1Q04311 632 aaKnown RBP3.65□□□□□ -1.83
YPT52YKR014C GPN2Q08726 347 aaPredicted RBP3.65□□□□□ -1.83
YPT52YKR014C NUS1Q12063 375 aa3.65□□□□□ -1.83
YPT52YKR014C GUK1P15454 187 aaKnown RBP3.64□□□□□ -1.83
YPT52YKR014C APA1P16550 321 aaKnown RBP3.64□□□□□ -1.83
YPT52YKR014C TKL1P23254 680 aaKnown RBP3.64□□□□□ -1.83
YPT52YKR014C DBF20P32328 564 aa3.64□□□□□ -1.83
YPT52YKR014C SAC1P32368 623 aaKnown RBP3.64□□□□□ -1.83
YPT52YKR014C GEX2P36173 615 aa3.64□□□□□ -1.83
YPT52YKR014C MNN2P38069 597 aa3.64□□□□□ -1.83
YPT52YKR014C PFK26P40433 827 aaKnown RBP3.64□□□□□ -1.83
YPT52YKR014C CTK2P46962 323 aa3.64□□□□□ -1.83
YPT52YKR014C YNL181WP53878 407 aa3.64□□□□□ -1.83
YPT52YKR014C RSM28Q03430 361 aa3.64□□□□□ -1.83
YPT52YKR014C ARP10Q04549 284 aa3.64□□□□□ -1.83
YPT52YKR014C CIA1Q05583 330 aa3.64□□□□□ -1.83
YPT52YKR014C SSM4P40318 1319 aa3.64□□□□□ -1.83
YPT52YKR014C PET111P08468 800 aa3.63□□□□□ -1.83
YPT52YKR014C KRS1P15180 591 aaKnown RBP3.63□□□□□ -1.83
YPT52YKR014C STE50P25344 346 aa3.63□□□□□ -1.83
YPT52YKR014C MRS6P32864 603 aaKnown RBP3.63□□□□□ -1.83
YPT52YKR014C CNS1P33313 385 aa3.63□□□□□ -1.83
YPT52YKR014C RTT107P38850 1070 aa3.63□□□□□ -1.83
YPT52YKR014C ECM10P39987 644 aa3.63□□□□□ -1.83
YPT52YKR014C TPM2P40414 161 aa3.63□□□□□ -1.83
YPT52YKR014C SAP185P40856 1058 aa3.63□□□□□ -1.83
YPT52YKR014C RPN11P43588 306 aaKnown RBP3.63□□□□□ -1.83
YPT52YKR014C YJR008WP47085 338 aa3.63□□□□□ -1.83
YPT52YKR014C PSP1P50896 841 aaKnown RBP3.63□□□□□ -1.83
YPT52YKR014C IST1P53843 298 aaPredicted RBP3.63□□□□□ -1.83
YPT52YKR014C BET4Q00618 327 aa3.63□□□□□ -1.83
YPT52YKR014C CTL1Q03220 320 aaKnown RBP3.63□□□□□ -1.83
YPT52YKR014C PSR2Q07949 397 aa3.63□□□□□ -1.83
YPT52YKR014C TAH18Q12181 623 aa3.63□□□□□ -1.83
YPT52YKR014C YLR302CO13544 120 aa3.62□□□□□ -1.83
YPT52YKR014C HXK2P04807 486 aaKnown RBP3.62□□□□□ -1.83
YPT52YKR014C YFL068WP0CX99 160 aa3.62□□□□□ -1.83
YPT52YKR014C YLL066W-AP0CY00 160 aa3.62□□□□□ -1.83
YPT52YKR014C YLL067W-AP0CY01 160 aa3.62□□□□□ -1.83
YPT52YKR014C RPB8P20436 146 aa3.62□□□□□ -1.83
YPT52YKR014C STV1P37296 890 aa3.62□□□□□ -1.83
YPT52YKR014C IFA38P38286 347 aa3.62□□□□□ -1.83
YPT52YKR014C RIC1P40395 1056 aa3.62□□□□□ -1.83
YPT52YKR014C CTF18P49956 741 aa3.62□□□□□ -1.83
YPT52YKR014C ASI1P54074 624 aa3.62□□□□□ -1.83
YPT52YKR014C DIG1Q03063 452 aaKnown RBP3.62□□□□□ -1.83
YPT52YKR014C FMP42Q04991 504 aa3.62□□□□□ -1.83
YPT52YKR014C ARP9Q05123 467 aa3.62□□□□□ -1.83
YPT52YKR014C YOR111WQ99210 232 aa3.62□□□□□ -1.83
YPT52YKR014C ESL2P36168 1195 aa3.61□□□□□ -1.83
YPT52YKR014C BZZ1P38822 633 aa3.61□□□□□ -1.83
YPT52YKR014C SWP82P43554 623 aa3.61□□□□□ -1.83
YPT52YKR014C IML2P47031 731 aa3.61□□□□□ -1.83
YPT52YKR014C YMR254CQ04838 102 aa3.61□□□□□ -1.83
YPT52YKR014C PCD1Q12524 340 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms