RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	ERG8	P24521	451 aa		4.65	□□□□□ -1.67
EBP2	YKL172W	AXL2	P38928	823 aa		4.65	□□□□□ -1.67
EBP2	YKL172W	CNA1	P23287	553 aa		4.64	□□□□□ -1.67
EBP2	YKL172W	ADE17	P38009	592 aa	Known RBP	4.64	□□□□□ -1.67
EBP2	YKL172W	IST1	P53843	298 aa	Predicted RBP	4.64	□□□□□ -1.67
EBP2	YKL172W	CBK1	P53894	756 aa		4.64	□□□□□ -1.67
EBP2	YKL172W	YNL144C	P53907	740 aa		4.64	□□□□□ -1.67
EBP2	YKL172W	MUB1	Q03162	620 aa		4.64	□□□□□ -1.67
EBP2	YKL172W	MRPL1	Q04599	285 aa		4.64	□□□□□ -1.67
EBP2	YKL172W	SWF1	Q04629	336 aa		4.64	□□□□□ -1.67
EBP2	YKL172W	YLR455W	Q06188	304 aa		4.64	□□□□□ -1.67
EBP2	YKL172W	PIG1	Q06216	648 aa		4.64	□□□□□ -1.67
EBP2	YKL172W	PFA4	Q12006	378 aa		4.64	□□□□□ -1.67
EBP2	YKL172W	RRI1	Q12468	440 aa		4.64	□□□□□ -1.67
EBP2	YKL172W	YCR006C	P25350	157 aa		4.63	□□□□□ -1.67
EBP2	YKL172W	MRP20	P32387	263 aa		4.63	□□□□□ -1.67
EBP2	YKL172W	ECM32	P32644	1121 aa	Known RBP	4.63	□□□□□ -1.67
EBP2	YKL172W	UBP13	P38187	747 aa		4.63	□□□□□ -1.67
EBP2	YKL172W	ECM10	P39987	644 aa		4.63	□□□□□ -1.67
EBP2	YKL172W	SWP82	P43554	623 aa		4.63	□□□□□ -1.67
EBP2	YKL172W	CTK2	P46962	323 aa		4.63	□□□□□ -1.67
EBP2	YKL172W	RSM28	Q03430	361 aa		4.63	□□□□□ -1.67
EBP2	YKL172W	SNO4	Q04902	237 aa		4.63	□□□□□ -1.67
EBP2	YKL172W	PSK2	Q08217	1101 aa		4.63	□□□□□ -1.67
EBP2	YKL172W	HSP33	Q08914	237 aa	Known RBP	4.63	□□□□□ -1.67
EBP2	YKL172W	HSP32	Q08992	237 aa		4.63	□□□□□ -1.67
EBP2	YKL172W	HXK2	P04807	486 aa	Known RBP	4.62	□□□□□ -1.67
EBP2	YKL172W	FUM1	P08417	488 aa	Known RBP	4.62	□□□□□ -1.67
EBP2	YKL172W	YMR124W	P39523	943 aa	Known RBP	4.62	□□□□□ -1.67
EBP2	YKL172W	PCI8	P40512	444 aa		4.62	□□□□□ -1.67
EBP2	YKL172W	GLO1	P50107	326 aa		4.62	□□□□□ -1.67
EBP2	YKL172W	YOL087C	Q99247	1116 aa		4.62	□□□□□ -1.67
EBP2	YKL172W	YPR089W	O13585	888 aa		4.61	□□□□□ -1.67
EBP2	YKL172W	YBR085C-A	O43137	85 aa		4.61	□□□□□ -1.67
EBP2	YKL172W	GPA1	P08539	472 aa		4.61	□□□□□ -1.67
EBP2	YKL172W	SCO2	P38072	301 aa		4.61	□□□□□ -1.67
EBP2	YKL172W	PSD1	P39006	500 aa		4.61	□□□□□ -1.67
EBP2	YKL172W	SLZ1	P40167	298 aa		4.61	□□□□□ -1.67
EBP2	YKL172W	YJR061W	P40355	935 aa		4.61	□□□□□ -1.67
EBP2	YKL172W	IME4	P41833	600 aa		4.61	□□□□□ -1.67
EBP2	YKL172W	ARC1	P46672	376 aa	Known RBP	4.61	□□□□□ -1.67
EBP2	YKL172W	AAD10	P47182	288 aa		4.61	□□□□□ -1.67
EBP2	YKL172W	BSC5	P53755	489 aa		4.61	□□□□□ -1.67
EBP2	YKL172W	EAF7	P53911	425 aa	Known RBP	4.61	□□□□□ -1.67
EBP2	YKL172W	YOR019W	Q99248	730 aa		4.61	□□□□□ -1.67
EBP2	YKL172W	GAL4	P04386	881 aa		4.6	□□□□□ -1.67
EBP2	YKL172W	RAP1	P11938	827 aa		4.6	□□□□□ -1.67
EBP2	YKL172W	PRE8	P23639	250 aa		4.6	□□□□□ -1.67
EBP2	YKL172W	ESL2	P36168	1195 aa		4.6	□□□□□ -1.67
EBP2	YKL172W	KTR3	P38130	404 aa	Predicted RBP	4.6	□□□□□ -1.67
EBP2	YKL172W	PKP1	P40530	394 aa		4.6	□□□□□ -1.67
EBP2	YKL172W	VPS25	P47142	202 aa		4.6	□□□□□ -1.67
EBP2	YKL172W	PFA5	Q03289	374 aa		4.6	□□□□□ -1.67
EBP2	YKL172W	ECM22	Q05958	814 aa	Predicted RBP	4.6	□□□□□ -1.67
EBP2	YKL172W	SKG3	Q06315	1026 aa		4.6	□□□□□ -1.67
EBP2	YKL172W	GPN2	Q08726	347 aa	Predicted RBP	4.6	□□□□□ -1.67
EBP2	YKL172W	ATX2	Q12067	313 aa		4.6	□□□□□ -1.67
EBP2	YKL172W	SKM1	Q12469	655 aa		4.6	□□□□□ -1.67
EBP2	YKL172W	PET111	P08468	800 aa		4.59	□□□□□ -1.67
EBP2	YKL172W	SAC1	P32368	623 aa	Known RBP	4.59	□□□□□ -1.67
EBP2	YKL172W	ALY1	P36117	915 aa		4.59	□□□□□ -1.67
EBP2	YKL172W	YPT11	P48559	417 aa		4.59	□□□□□ -1.67
EBP2	YKL172W	SEC5	P89102	971 aa		4.59	□□□□□ -1.67
EBP2	YKL172W	RGT2	Q12300	763 aa		4.59	□□□□□ -1.67
EBP2	YKL172W	NKP1	Q12493	238 aa		4.59	□□□□□ -1.67
EBP2	YKL172W	YER190C-B	P0CX94	160 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	YEL077W-A	P0CX95	160 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	YGR296C-B	P0CX96	160 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	YPL283W-B	P0CX97	160 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	YPR204C-A	P0CX98	160 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	CDC24	P11433	854 aa	Predicted RBP	4.58	□□□□□ -1.68
EBP2	YKL172W	AIM17	P23180	465 aa	Known RBP	4.58	□□□□□ -1.68
EBP2	YKL172W	STE50	P25344	346 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	MGM1	P32266	881 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	MCM10	P32354	571 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	ASK1	P35734	292 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	PXL1	P36166	706 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	YNG2	P38806	282 aa	Known RBP	4.58	□□□□□ -1.68
EBP2	YKL172W	FLO5	P38894	1075 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	VPS41	P38959	992 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	UIP3	P39547	235 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	DPB11	P47027	764 aa	Predicted RBP	4.58	□□□□□ -1.68
EBP2	YKL172W	SMC3	P47037	1230 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	SCW4	P53334	386 aa	Known RBP	4.58	□□□□□ -1.68
EBP2	YKL172W	MEP3	P53390	489 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	YNR061C	P53747	219 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	INA17	Q02888	182 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	CAC2	Q04199	468 aa		4.58	□□□□□ -1.68
EBP2	YKL172W	KRS1	P15180	591 aa	Known RBP	4.57	□□□□□ -1.68
EBP2	YKL172W	TMT1	P32643	299 aa		4.57	□□□□□ -1.68
EBP2	YKL172W	VID27	P40157	782 aa		4.57	□□□□□ -1.68
EBP2	YKL172W	SEC24	P40482	926 aa	Known RBP	4.57	□□□□□ -1.68
EBP2	YKL172W	GAT1	P43574	510 aa		4.57	□□□□□ -1.68
EBP2	YKL172W	SIP4	P46954	829 aa		4.57	□□□□□ -1.68
EBP2	YKL172W	PIL1	P53252	339 aa	Known RBP	4.57	□□□□□ -1.68
EBP2	YKL172W	SUB1	P54000	292 aa	Known RBP	4.57	□□□□□ -1.68
EBP2	YKL172W	RPL15B	P54780	204 aa	Predicted RBP	4.57	□□□□□ -1.68
EBP2	YKL172W	HER1	Q12276	1246 aa		4.57	□□□□□ -1.68
EBP2	YKL172W	ICT1	Q12385	394 aa		4.57	□□□□□ -1.68
EBP2	YKL172W	SPE2	P21182	396 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 45 ms