RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	UBP13	P38187	747 aa		2.53	□□□□□ -2
NUP82	YJL061W	SPC97	P38863	823 aa		2.53	□□□□□ -2
NUP82	YJL061W	RPN11	P43588	306 aa	Known RBP	2.53	□□□□□ -2
NUP82	YJL061W	YNL144C	P53907	740 aa		2.53	□□□□□ -2
NUP82	YJL061W	SNO4	Q04902	237 aa		2.53	□□□□□ -2
NUP82	YJL061W	HSP33	Q08914	237 aa	Known RBP	2.53	□□□□□ -2
NUP82	YJL061W	HSP32	Q08992	237 aa		2.53	□□□□□ -2
NUP82	YJL061W	RPB2	P08518	1224 aa	Known RBP	2.53	□□□□□ -2.01
NUP82	YJL061W	CNA1	P23287	553 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	YCR006C	P25350	157 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	MRP20	P32387	263 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	CBF2	P32504	956 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	ECM32	P32644	1121 aa	Known RBP	2.53	□□□□□ -2.01
NUP82	YJL061W	YMR124W	P39523	943 aa	Known RBP	2.53	□□□□□ -2.01
NUP82	YJL061W	PCI8	P40512	444 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	SWP82	P43554	623 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	GLO1	P50107	326 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	IST1	P53843	298 aa	Predicted RBP	2.53	□□□□□ -2.01
NUP82	YJL061W	CBK1	P53894	756 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	RSM28	Q03430	361 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	SWF1	Q04629	336 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	ECM22	Q05958	814 aa	Predicted RBP	2.53	□□□□□ -2.01
NUP82	YJL061W	YLR455W	Q06188	304 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	PIG1	Q06216	648 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	PSK2	Q08217	1101 aa		2.53	□□□□□ -2.01
NUP82	YJL061W	GAL4	P04386	881 aa		2.52	□□□□□ -2.01
NUP82	YJL061W	TOP1	P04786	769 aa		2.52	□□□□□ -2.01
NUP82	YJL061W	SCO2	P38072	301 aa		2.52	□□□□□ -2.01
NUP82	YJL061W	PSD1	P39006	500 aa		2.52	□□□□□ -2.01
NUP82	YJL061W	ECM10	P39987	644 aa		2.52	□□□□□ -2.01
NUP82	YJL061W	CTK2	P46962	323 aa		2.52	□□□□□ -2.01
NUP82	YJL061W	MUB1	Q03162	620 aa		2.52	□□□□□ -2.01
NUP82	YJL061W	PFA5	Q03289	374 aa		2.52	□□□□□ -2.01
NUP82	YJL061W	MRPL1	Q04599	285 aa		2.52	□□□□□ -2.01
NUP82	YJL061W	YOL087C	Q99247	1116 aa		2.52	□□□□□ -2.01
NUP82	YJL061W	YOR019W	Q99248	730 aa		2.52	□□□□□ -2.01
NUP82	YJL061W	YPR089W	O13585	888 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	YBR085C-A	O43137	85 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	HXK2	P04807	486 aa	Known RBP	2.51	□□□□□ -2.01
NUP82	YJL061W	FUM1	P08417	488 aa	Known RBP	2.51	□□□□□ -2.01
NUP82	YJL061W	GPA1	P08539	472 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	KTR3	P38130	404 aa	Predicted RBP	2.51	□□□□□ -2.01
NUP82	YJL061W	FLO5	P38894	1075 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	YJR061W	P40355	935 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	IME4	P41833	600 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	RGT2	Q12300	763 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	PRE8	P23639	250 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	ALY1	P36117	915 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	ESL2	P36168	1195 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	SLZ1	P40167	298 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	ARC1	P46672	376 aa	Known RBP	2.51	□□□□□ -2.01
NUP82	YJL061W	VPS25	P47142	202 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	YPT11	P48559	417 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	BSC5	P53755	489 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	EAF7	P53911	425 aa	Known RBP	2.51	□□□□□ -2.01
NUP82	YJL061W	SEC5	P89102	971 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	GPN2	Q08726	347 aa	Predicted RBP	2.51	□□□□□ -2.01
NUP82	YJL061W	ATX2	Q12067	313 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	SKM1	Q12469	655 aa		2.51	□□□□□ -2.01
NUP82	YJL061W	PET111	P08468	800 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	YER190C-B	P0CX94	160 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	YEL077W-A	P0CX95	160 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	YGR296C-B	P0CX96	160 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	YPL283W-B	P0CX97	160 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	YPR204C-A	P0CX98	160 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	RAP1	P11938	827 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	MCM10	P32354	571 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	ASK1	P35734	292 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	PXL1	P36166	706 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	PKP1	P40530	394 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	AAD10	P47182	288 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	MEP3	P53390	489 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	SKG3	Q06315	1026 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	HER1	Q12276	1246 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	YER145C-A	A0A023PYF4	145 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	CDC24	P11433	854 aa	Predicted RBP	2.5	□□□□□ -2.01
NUP82	YJL061W	AIM17	P23180	465 aa	Known RBP	2.5	□□□□□ -2.01
NUP82	YJL061W	STE50	P25344	346 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	MGM1	P32266	881 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	SAC1	P32368	623 aa	Known RBP	2.5	□□□□□ -2.01
NUP82	YJL061W	TMT1	P32643	299 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	VPS41	P38959	992 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	SEC24	P40482	926 aa	Known RBP	2.5	□□□□□ -2.01
NUP82	YJL061W	DPH1	P40487	425 aa	Known RBP	2.5	□□□□□ -2.01
NUP82	YJL061W	GAT1	P43574	510 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	SMC3	P47037	1230 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	SCW4	P53334	386 aa	Known RBP	2.5	□□□□□ -2.01
NUP82	YJL061W	YNR061C	P53747	219 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	FRE3	Q08905	711 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	ICT1	Q12385	394 aa		2.5	□□□□□ -2.01
NUP82	YJL061W	TKL1	P23254	680 aa	Known RBP	2.49	□□□□□ -2.01
NUP82	YJL061W	VID27	P40157	782 aa		2.49	□□□□□ -2.01
NUP82	YJL061W	YIR016W	P40572	265 aa		2.49	□□□□□ -2.01
NUP82	YJL061W	YFR020W	P43600	232 aa		2.49	□□□□□ -2.01
NUP82	YJL061W	SIP4	P46954	829 aa		2.49	□□□□□ -2.01
NUP82	YJL061W	MDV1	P47025	714 aa		2.49	□□□□□ -2.01
NUP82	YJL061W	DPB11	P47027	764 aa	Predicted RBP	2.49	□□□□□ -2.01
NUP82	YJL061W	YGL036W	P53185	909 aa	Predicted RBP	2.49	□□□□□ -2.01
NUP82	YJL061W	PIL1	P53252	339 aa	Known RBP	2.49	□□□□□ -2.01
NUP82	YJL061W	NNF2	P53253	936 aa		2.49	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms