RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	CPR8	P53728	308 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	ADE16	P54113	591 aa	Known RBP	4.04	□□□□□ -1.76
YPT35	YHR105W	ATG23	Q06671	453 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	YDL073W	Q07454	984 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	CRT10	Q08226	957 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	NUS1	Q12063	375 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	TAH18	Q12181	623 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	HSH49	Q99181	213 aa	Predicted RBP	4.04	□□□□□ -1.76
YPT35	YHR105W	ATG2	P53855	1592 aa		4.04	□□□□□ -1.76
YPT35	YHR105W	PDR15	Q04182	1529 aa	Known RBP	4.04	□□□□□ -1.76
YPT35	YHR105W	GEA1	P47102	1408 aa	Predicted RBP	4.04	□□□□□ -1.76
YPT35	YHR105W	MET17	P06106	444 aa		4.03	□□□□□ -1.76
YPT35	YHR105W	SES1	P07284	462 aa	Known RBP	4.03	□□□□□ -1.76
YPT35	YHR105W	STE12	P13574	688 aa		4.03	□□□□□ -1.76
YPT35	YHR105W	UBP13	P38187	747 aa		4.03	□□□□□ -1.76
YPT35	YHR105W	FLC2	P39719	783 aa		4.03	□□□□□ -1.76
YPT35	YHR105W	SPO22	P40511	975 aa		4.03	□□□□□ -1.76
YPT35	YHR105W	LCL3	P53153	274 aa		4.03	□□□□□ -1.76
YPT35	YHR105W	YPL071C	Q02864	156 aa		4.03	□□□□□ -1.76
YPT35	YHR105W	ARG7	Q04728	441 aa		4.03	□□□□□ -1.76
YPT35	YHR105W	CRN1	Q06440	651 aa		4.03	□□□□□ -1.76
YPT35	YHR105W	YPL272C	Q08984	517 aa		4.03	□□□□□ -1.76
YPT35	YHR105W	NMD4	Q12129	218 aa		4.03	□□□□□ -1.76
YPT35	YHR105W	MDM20	Q12387	796 aa	Known RBP	4.03	□□□□□ -1.76
YPT35	YHR105W	ERG27	Q12452	347 aa	Known RBP	4.03	□□□□□ -1.76
YPT35	YHR105W	YCF1	P39109	1515 aa	Known RBP	4.03	□□□□□ -1.76
YPT35	YHR105W	PEP1	P32319	1579 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	KOG1	P38873	1557 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	POL4	P25615	582 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	ERG3	P32353	365 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	NTR2	P36118	322 aa	Predicted RBP	4.02	□□□□□ -1.77
YPT35	YHR105W	RPF2	P36160	344 aa	Known RBP	4.02	□□□□□ -1.77
YPT35	YHR105W	CCT6	P39079	546 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	ATF1	P40353	525 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	DJP1	P40564	432 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	MDG1	P53885	366 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	WAR1	Q03631	944 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	CTI6	Q08923	506 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	BAG7	Q12128	409 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	HUA2	Q12134	243 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	SCM3	Q12334	223 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	NOP58	Q12499	511 aa	Known RBP	4.02	□□□□□ -1.77
YPT35	YHR105W	TSC11	P40061	1430 aa		4.02	□□□□□ -1.77
YPT35	YHR105W	GCN4	P03069	281 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	RPL7A	P05737	244 aa	Known RBP	4.01	□□□□□ -1.77
YPT35	YHR105W	SEC53	P07283	254 aa	Known RBP	4.01	□□□□□ -1.77
YPT35	YHR105W	CKA1	P15790	372 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	PMA2	P19657	947 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	PGS1	P25578	521 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	LAC1	P28496	418 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	SIP1	P32578	815 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	PRS1	P32895	427 aa	Known RBP	4.01	□□□□□ -1.77
YPT35	YHR105W	TFC3	P34111	1160 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	NOP4	P37838	685 aa	Known RBP	4.01	□□□□□ -1.77
YPT35	YHR105W	MAL33	P38157	468 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	SRO77	P38163	1010 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	VBA2	P38358	474 aa	Known RBP	4.01	□□□□□ -1.77
YPT35	YHR105W	RTS1	P38903	757 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	FUN12	P39730	1002 aa	Known RBP	4.01	□□□□□ -1.77
YPT35	YHR105W	YEL057C	P39983	233 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	COG2	P53271	262 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	YAT1	P80235	687 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	SYF1	Q04048	859 aa	Predicted RBP	4.01	□□□□□ -1.77
YPT35	YHR105W	RPC11	Q04307	110 aa	Predicted RBP	4.01	□□□□□ -1.77
YPT35	YHR105W	PLM2	Q04383	521 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	YDR109C	Q04585	715 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	YLR287C	Q05881	355 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	SKG3	Q06315	1026 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	SWA2	Q06677	668 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	YOL159C	Q08300	171 aa		4.01	□□□□□ -1.77
YPT35	YHR105W	GET3	Q12154	354 aa	Known RBP	4.01	□□□□□ -1.77
YPT35	YHR105W	RPL7B	Q12213	244 aa	Known RBP	4.01	□□□□□ -1.77
YPT35	YHR105W	TOP2	P06786	1428 aa	Known RBP	4.01	□□□□□ -1.77
YPT35	YHR105W	RTC1	Q08281	1341 aa		4	□□□□□ -1.77
YPT35	YHR105W	ROX1	P25042	368 aa		4	□□□□□ -1.77
YPT35	YHR105W	NPL6	P32832	435 aa		4	□□□□□ -1.77
YPT35	YHR105W	CUE2	P36075	443 aa	Known RBP	4	□□□□□ -1.77
YPT35	YHR105W	MNN2	P38069	597 aa		4	□□□□□ -1.77
YPT35	YHR105W	MUP3	P38734	546 aa		4	□□□□□ -1.77
YPT35	YHR105W	YEL020C	P39994	560 aa		4	□□□□□ -1.77
YPT35	YHR105W	LSM5	P40089	93 aa	Known RBP	4	□□□□□ -1.77
YPT35	YHR105W	LAS21	P40367	830 aa		4	□□□□□ -1.77
YPT35	YHR105W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
YPT35	YHR105W	TDA10	P42938	290 aa		4	□□□□□ -1.77
YPT35	YHR105W	LGE1	Q02796	332 aa	Known RBP	4	□□□□□ -1.77
YPT35	YHR105W	INA17	Q02888	182 aa		4	□□□□□ -1.77
YPT35	YHR105W	ARP9	Q05123	467 aa		4	□□□□□ -1.77
YPT35	YHR105W	SPN1	Q06505	410 aa	Predicted RBP	4	□□□□□ -1.77
YPT35	YHR105W	RAD34	Q06665	692 aa		4	□□□□□ -1.77
YPT35	YHR105W	RRG1	Q12167	365 aa	Predicted RBP	4	□□□□□ -1.77
YPT35	YHR105W	AHA1	Q12449	350 aa	Known RBP	4	□□□□□ -1.77
YPT35	YHR105W	SRB8	P25648	1427 aa		4	□□□□□ -1.77
YPT35	YHR105W	BNR1	P40450	1375 aa		4	□□□□□ -1.77
YPT35	YHR105W	ULS1	Q08562	1619 aa		3.99	□□□□□ -1.77
YPT35	YHR105W	RPO31	P04051	1460 aa		3.99	□□□□□ -1.77
YPT35	YHR105W	NUP159	P40477	1460 aa		3.99	□□□□□ -1.77
YPT35	YHR105W	YBR085C-A	O43137	85 aa		3.99	□□□□□ -1.77
YPT35	YHR105W	CBS1	P14066	229 aa		3.99	□□□□□ -1.77
YPT35	YHR105W	RED1	P14291	827 aa		3.99	□□□□□ -1.77
YPT35	YHR105W	ADY2	P25613	283 aa		3.99	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms