RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	YIL152W	P40455	235 aa		4.08	□□□□□ -1.76
VMA7	YGR020C	LSC1	P53598	329 aa	Known RBP	4.08	□□□□□ -1.76
VMA7	YGR020C	SRL1	Q08673	210 aa		4.08	□□□□□ -1.76
VMA7	YGR020C	DSE3	Q08729	430 aa		4.08	□□□□□ -1.76
VMA7	YGR020C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
VMA7	YGR020C	SOF1	P33750	489 aa	Known RBP	4.07	□□□□□ -1.76
VMA7	YGR020C	TFC3	P34111	1160 aa		4.07	□□□□□ -1.76
VMA7	YGR020C	NTR2	P36118	322 aa	Predicted RBP	4.07	□□□□□ -1.76
VMA7	YGR020C	IST3	P40565	148 aa	Predicted RBP	4.07	□□□□□ -1.76
VMA7	YGR020C	SAP185	P40856	1058 aa		4.07	□□□□□ -1.76
VMA7	YGR020C	SCS3	P53012	380 aa		4.07	□□□□□ -1.76
VMA7	YGR020C	PFA5	Q03289	374 aa		4.07	□□□□□ -1.76
VMA7	YGR020C	NUP53	Q03790	475 aa		4.07	□□□□□ -1.76
VMA7	YGR020C	CAC2	Q04199	468 aa		4.07	□□□□□ -1.76
VMA7	YGR020C	POS5	Q06892	414 aa		4.07	□□□□□ -1.76
VMA7	YGR020C	BUD7	Q08754	746 aa		4.07	□□□□□ -1.76
VMA7	YGR020C	YLR112W	Q12130	139 aa		4.07	□□□□□ -1.76
VMA7	YGR020C	ERG27	Q12452	347 aa	Known RBP	4.07	□□□□□ -1.76
VMA7	YGR020C	RPL42A	P0CX27	106 aa	Known RBP	4.06	□□□□□ -1.76
VMA7	YGR020C	RPL42B	P0CX28	106 aa	Known RBP	4.06	□□□□□ -1.76
VMA7	YGR020C	MRS6	P32864	603 aa	Known RBP	4.06	□□□□□ -1.76
VMA7	YGR020C	AAP1	P37898	856 aa	Known RBP	4.06	□□□□□ -1.76
VMA7	YGR020C	SEC31	P38968	1273 aa	Known RBP	4.06	□□□□□ -1.76
VMA7	YGR020C	SWP82	P43554	623 aa		4.06	□□□□□ -1.76
VMA7	YGR020C	CTF18	P49956	741 aa		4.06	□□□□□ -1.76
VMA7	YGR020C	PSP1	P50896	841 aa	Known RBP	4.06	□□□□□ -1.76
VMA7	YGR020C	TDA9	Q04545	1251 aa		4.06	□□□□□ -1.76
VMA7	YGR020C	TFC6	Q06339	672 aa		4.06	□□□□□ -1.76
VMA7	YGR020C	MLH2	Q07980	695 aa		4.06	□□□□□ -1.76
VMA7	YGR020C	CHO1	P08456	276 aa		4.05	□□□□□ -1.76
VMA7	YGR020C	PET111	P08468	800 aa		4.05	□□□□□ -1.76
VMA7	YGR020C	SRB5	P32585	307 aa		4.05	□□□□□ -1.76
VMA7	YGR020C	TEF4	P36008	412 aa	Known RBP	4.05	□□□□□ -1.76
VMA7	YGR020C	UME6	P39001	836 aa		4.05	□□□□□ -1.76
VMA7	YGR020C	FCP1	Q03254	732 aa		4.05	□□□□□ -1.76
VMA7	YGR020C	IZH1	Q03419	316 aa		4.05	□□□□□ -1.76
VMA7	YGR020C	ATG16	Q03818	150 aa		4.05	□□□□□ -1.76
VMA7	YGR020C	YMR034C	Q05131	434 aa	Predicted RBP	4.05	□□□□□ -1.76
VMA7	YGR020C	PSR2	Q07949	397 aa		4.05	□□□□□ -1.76
VMA7	YGR020C	SSM4	P40318	1319 aa		4.04	□□□□□ -1.76
VMA7	YGR020C	STE50	P25344	346 aa		4.04	□□□□□ -1.76
VMA7	YGR020C	PSY4	P38193	441 aa		4.04	□□□□□ -1.76
VMA7	YGR020C	ARC40	P38328	384 aa	Known RBP	4.04	□□□□□ -1.76
VMA7	YGR020C	IES5	P40060	125 aa		4.04	□□□□□ -1.76
VMA7	YGR020C	PFK26	P40433	827 aa	Known RBP	4.04	□□□□□ -1.76
VMA7	YGR020C	CTK2	P46962	323 aa		4.04	□□□□□ -1.76
VMA7	YGR020C	RRT6	P53117	311 aa	Predicted RBP	4.04	□□□□□ -1.76
VMA7	YGR020C	ASI1	P54074	624 aa		4.04	□□□□□ -1.76
VMA7	YGR020C	RSM28	Q03430	361 aa		4.04	□□□□□ -1.76
VMA7	YGR020C	VMS1	Q04311	632 aa	Known RBP	4.04	□□□□□ -1.76
VMA7	YGR020C	ECI1	Q05871	280 aa		4.04	□□□□□ -1.76
VMA7	YGR020C	YFL068W	P0CX99	160 aa		4.03	□□□□□ -1.76
VMA7	YGR020C	YLL066W-A	P0CY00	160 aa		4.03	□□□□□ -1.76
VMA7	YGR020C	YLL067W-A	P0CY01	160 aa		4.03	□□□□□ -1.76
VMA7	YGR020C	TKL1	P23254	680 aa	Known RBP	4.03	□□□□□ -1.76
VMA7	YGR020C	YCR043C	P25361	127 aa		4.03	□□□□□ -1.76
VMA7	YGR020C	YUR1	P26725	428 aa		4.03	□□□□□ -1.76
VMA7	YGR020C	CDC15	P27636	974 aa		4.03	□□□□□ -1.76
VMA7	YGR020C	CNS1	P33313	385 aa		4.03	□□□□□ -1.76
VMA7	YGR020C	ECM10	P39987	644 aa		4.03	□□□□□ -1.76
VMA7	YGR020C	TES1	P41903	349 aa	Known RBP	4.03	□□□□□ -1.76
VMA7	YGR020C	GTR1	Q00582	310 aa		4.03	□□□□□ -1.76
VMA7	YGR020C	REG1	Q00816	1014 aa		4.03	□□□□□ -1.76
VMA7	YGR020C	YLR302C	O13544	120 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	RAP1	P11938	827 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	ERG8	P24521	451 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	MNN2	P38069	597 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	MET30	P39014	640 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	PCL6	P40038	420 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	VRG4	P40107	337 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	MEP2	P41948	499 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	RPN11	P43588	306 aa	Known RBP	4.02	□□□□□ -1.77
VMA7	YGR020C	STB2	P46679	850 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	BNA1	P47096	177 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	ARP9	Q05123	467 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	TRM8	Q12009	286 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	VCX1	Q99385	411 aa		4.02	□□□□□ -1.77
VMA7	YGR020C	SNF1	P06782	633 aa	Known RBP	4.01	□□□□□ -1.77
VMA7	YGR020C	CBP1	P07252	654 aa		4.01	□□□□□ -1.77
VMA7	YGR020C	SAC1	P32368	623 aa	Known RBP	4.01	□□□□□ -1.77
VMA7	YGR020C	VPS24	P36095	224 aa	Known RBP	4.01	□□□□□ -1.77
VMA7	YGR020C	RIC1	P40395	1056 aa		4.01	□□□□□ -1.77
VMA7	YGR020C	YIL169C	P40442	995 aa		4.01	□□□□□ -1.77
VMA7	YGR020C	VPS4	P52917	437 aa		4.01	□□□□□ -1.77
VMA7	YGR020C	VID22	Q05934	901 aa		4.01	□□□□□ -1.77
VMA7	YGR020C	UTP21	Q06078	939 aa	Predicted RBP	4.01	□□□□□ -1.77
VMA7	YGR020C	MCP2	Q06567	569 aa		4.01	□□□□□ -1.77
VMA7	YGR020C	NUS1	Q12063	375 aa		4.01	□□□□□ -1.77
VMA7	YGR020C	PWP2	P25635	923 aa	Known RBP	4	□□□□□ -1.77
VMA7	YGR020C	PSD1	P39006	500 aa		4	□□□□□ -1.77
VMA7	YGR020C	YFR020W	P43600	232 aa		4	□□□□□ -1.77
VMA7	YGR020C	YGR021W	P53212	290 aa		4	□□□□□ -1.77
VMA7	YGR020C	RTS3	P53289	263 aa		4	□□□□□ -1.77
VMA7	YGR020C	ESBP6	P53918	673 aa		4	□□□□□ -1.77
VMA7	YGR020C	DIG1	Q03063	452 aa	Known RBP	4	□□□□□ -1.77
VMA7	YGR020C	ARP10	Q04549	284 aa		4	□□□□□ -1.77
VMA7	YGR020C	PSK2	Q08217	1101 aa		4	□□□□□ -1.77
VMA7	YGR020C	YOR019W	Q99248	730 aa		4	□□□□□ -1.77
VMA7	YGR020C	SLC1	P33333	303 aa		3.99	□□□□□ -1.77
VMA7	YGR020C	ESL2	P36168	1195 aa		3.99	□□□□□ -1.77

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