RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeast

Gene PRP18, Length 756 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP18	YGR006W	GET3	Q12154	354 aa	Known RBP	4.13	□□□□□ -1.75
PRP18	YGR006W	YOR019W	Q99248	730 aa		4.13	□□□□□ -1.75
PRP18	YGR006W	YBR085C-A	O43137	85 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	CDC24	P11433	854 aa	Predicted RBP	4.12	□□□□□ -1.75
PRP18	YGR006W	COQ3	P27680	312 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	OCT1	P35999	772 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	ALY1	P36117	915 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	ADE17	P38009	592 aa	Known RBP	4.12	□□□□□ -1.75
PRP18	YGR006W	KTR3	P38130	404 aa	Predicted RBP	4.12	□□□□□ -1.75
PRP18	YGR006W	ARN1	P38731	627 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	CDC1	P40986	491 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	IME4	P41833	600 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	SWP82	P43554	623 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	SIP4	P46954	829 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	AAD10	P47182	288 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	IST1	P53843	298 aa	Predicted RBP	4.12	□□□□□ -1.75
PRP18	YGR006W	RSC9	Q03124	581 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	VPS72	Q03388	795 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	RSM28	Q03430	361 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	TMA64	Q04600	565 aa	Known RBP	4.12	□□□□□ -1.75
PRP18	YGR006W	PDR8	Q06149	701 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	YDR056C	Q12025	205 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	YLR049C	Q12110	428 aa		4.12	□□□□□ -1.75
PRP18	YGR006W	CDC16	P09798	840 aa		4.11	□□□□□ -1.75
PRP18	YGR006W	UBP13	P38187	747 aa		4.11	□□□□□ -1.75
PRP18	YGR006W	TPA1	P40032	644 aa	Known RBP	4.11	□□□□□ -1.75
PRP18	YGR006W	XBP1	P40489	647 aa		4.11	□□□□□ -1.75
PRP18	YGR006W	PSA1	P41940	361 aa	Known RBP	4.11	□□□□□ -1.75
PRP18	YGR006W	YJL107C	P42947	387 aa		4.11	□□□□□ -1.75
PRP18	YGR006W	PIL1	P53252	339 aa	Known RBP	4.11	□□□□□ -1.75
PRP18	YGR006W	YNR061C	P53747	219 aa		4.11	□□□□□ -1.75
PRP18	YGR006W	YML122C	Q03207	126 aa		4.11	□□□□□ -1.75
PRP18	YGR006W	MCH4	Q08268	501 aa		4.11	□□□□□ -1.75
PRP18	YGR006W	GPN2	Q08726	347 aa	Predicted RBP	4.11	□□□□□ -1.75
PRP18	YGR006W	HXK2	P04807	486 aa	Known RBP	4.1	□□□□□ -1.75
PRP18	YGR006W	PTP1	P25044	335 aa		4.1	□□□□□ -1.75
PRP18	YGR006W	MUD2	P36084	527 aa	Known RBP	4.1	□□□□□ -1.75
PRP18	YGR006W	YEL068C	P39977	110 aa		4.1	□□□□□ -1.75
PRP18	YGR006W	ECM10	P39987	644 aa		4.1	□□□□□ -1.75
PRP18	YGR006W	NOP16	P40007	231 aa	Known RBP	4.1	□□□□□ -1.75
PRP18	YGR006W	FMP10	P40098	244 aa		4.1	□□□□□ -1.75
PRP18	YGR006W	CTK2	P46962	323 aa		4.1	□□□□□ -1.75
PRP18	YGR006W	BNA3	P47039	444 aa	Known RBP	4.1	□□□□□ -1.75
PRP18	YGR006W	UBP8	P50102	471 aa		4.1	□□□□□ -1.75
PRP18	YGR006W	INA17	Q02888	182 aa		4.1	□□□□□ -1.75
PRP18	YGR006W	YLR455W	Q06188	304 aa		4.1	□□□□□ -1.75
PRP18	YGR006W	SKG3	Q06315	1026 aa		4.1	□□□□□ -1.75
PRP18	YGR006W	ENT1	Q12518	454 aa		4.1	□□□□□ -1.75
PRP18	YGR006W	YOR111W	Q99210	232 aa		4.1	□□□□□ -1.75
PRP18	YGR006W	YMR085W	P0CF18	432 aa		4.09	□□□□□ -1.75
PRP18	YGR006W	YCR006C	P25350	157 aa		4.09	□□□□□ -1.75
PRP18	YGR006W	PAH1	P32567	862 aa		4.09	□□□□□ -1.75
PRP18	YGR006W	YPT53	P36019	220 aa		4.09	□□□□□ -1.75
PRP18	YGR006W	ESL2	P36168	1195 aa		4.09	□□□□□ -1.75
PRP18	YGR006W	YNG2	P38806	282 aa	Known RBP	4.09	□□□□□ -1.75
PRP18	YGR006W	SEC24	P40482	926 aa	Known RBP	4.09	□□□□□ -1.75
PRP18	YGR006W	COP1	P53622	1201 aa	Known RBP	4.09	□□□□□ -1.75
PRP18	YGR006W	INN1	P53901	409 aa		4.09	□□□□□ -1.75
PRP18	YGR006W	PIG1	Q06216	648 aa		4.09	□□□□□ -1.75
PRP18	YGR006W	ENT4	Q07872	247 aa		4.09	□□□□□ -1.75
PRP18	YGR006W	CRC1	Q12289	327 aa		4.09	□□□□□ -1.75
PRP18	YGR006W	SEM1	O94742	89 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	PET111	P08468	800 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	RPL19A	P0CX82	189 aa	Known RBP	4.08	□□□□□ -1.76
PRP18	YGR006W	RPL19B	P0CX83	189 aa	Predicted RBP	4.08	□□□□□ -1.76
PRP18	YGR006W	YBL029W	P38201	376 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	TOM71	P38825	639 aa	Known RBP	4.08	□□□□□ -1.76
PRP18	YGR006W	PKP1	P40530	394 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	CFD1	P40558	293 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	VTC3	Q02725	835 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	PFA5	Q03289	374 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	SWF1	Q04629	336 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	PSR1	Q07800	427 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	RIX7	Q07844	837 aa	Known RBP	4.08	□□□□□ -1.76
PRP18	YGR006W	TCO89	Q08921	799 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	PFA4	Q12006	378 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	RRI2	Q12348	645 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	RRI1	Q12468	440 aa		4.08	□□□□□ -1.76
PRP18	YGR006W	GPA1	P08539	472 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	YAP1	P19880	650 aa	Known RBP	4.07	□□□□□ -1.76
PRP18	YGR006W	CNA1	P23287	553 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	IMP2'	P32351	346 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	PDB1	P32473	366 aa	Known RBP	4.07	□□□□□ -1.76
PRP18	YGR006W	SAC6	P32599	642 aa	Known RBP	4.07	□□□□□ -1.76
PRP18	YGR006W	NOP4	P37838	685 aa	Known RBP	4.07	□□□□□ -1.76
PRP18	YGR006W	AGP2	P38090	596 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	RTS1	P38903	757 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	UIP3	P39547	235 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	LYS14	P40971	790 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	DPB11	P47027	764 aa	Predicted RBP	4.07	□□□□□ -1.76
PRP18	YGR006W	NET1	P47035	1189 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	SMC3	P47037	1230 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	YSA1	Q01976	231 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	RAD30	Q04049	632 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	YKU80	Q04437	629 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	VIP1	Q06685	1146 aa	Known RBP	4.07	□□□□□ -1.76
PRP18	YGR006W	HUA2	Q12134	243 aa		4.07	□□□□□ -1.76
PRP18	YGR006W	RAP1	P11938	827 aa		4.06	□□□□□ -1.76
PRP18	YGR006W	SPE2	P21182	396 aa		4.06	□□□□□ -1.76
PRP18	YGR006W	SAN1	P22470	610 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms