RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	HUA2	Q12134	243 aa		4.19	□□□□□ -1.74
NUG1	YER006W	GRX6	Q12438	231 aa		4.19	□□□□□ -1.74
NUG1	YER006W	CET1	O13297	549 aa	Predicted RBP	4.19	□□□□□ -1.74
NUG1	YER006W	STE3	P06783	470 aa		4.19	□□□□□ -1.74
NUG1	YER006W	RAD57	P25301	460 aa		4.19	□□□□□ -1.74
NUG1	YER006W	RNQ1	P25367	405 aa		4.19	□□□□□ -1.74
NUG1	YER006W	PPQ1	P32945	549 aa		4.19	□□□□□ -1.74
NUG1	YER006W	RCN1	P36054	211 aa		4.19	□□□□□ -1.74
NUG1	YER006W	YHL008C	P38750	627 aa		4.19	□□□□□ -1.74
NUG1	YER006W	VPS45	P38932	577 aa		4.19	□□□□□ -1.74
NUG1	YER006W	SUR2	P38992	349 aa		4.19	□□□□□ -1.74
NUG1	YER006W	MNN1	P39106	762 aa		4.19	□□□□□ -1.74
NUG1	YER006W	PZF1	P39933	429 aa		4.19	□□□□□ -1.74
NUG1	YER006W	ELP2	P42935	788 aa		4.19	□□□□□ -1.74
NUG1	YER006W	GLG2	P47011	380 aa		4.19	□□□□□ -1.74
NUG1	YER006W	TMA22	P47089	198 aa	Predicted RBP	4.19	□□□□□ -1.74
NUG1	YER006W	DAM1	P53267	343 aa		4.19	□□□□□ -1.74
NUG1	YER006W	YGR125W	P53273	1036 aa		4.19	□□□□□ -1.74
NUG1	YER006W	UTP8	P53276	713 aa	Known RBP	4.19	□□□□□ -1.74
NUG1	YER006W	LSB1	P53281	241 aa		4.19	□□□□□ -1.74
NUG1	YER006W	ZRG17	P53735	605 aa		4.19	□□□□□ -1.74
NUG1	YER006W	YNR063W	P53749	607 aa		4.19	□□□□□ -1.74
NUG1	YER006W	BNA7	Q04066	261 aa		4.19	□□□□□ -1.74
NUG1	YER006W	ARP10	Q04549	284 aa		4.19	□□□□□ -1.74
NUG1	YER006W	BSC2	Q05611	235 aa		4.19	□□□□□ -1.74
NUG1	YER006W	YLL007C	Q07799	665 aa		4.19	□□□□□ -1.74
NUG1	YER006W	SIL1	Q08199	421 aa		4.19	□□□□□ -1.74
NUG1	YER006W	NEW1	Q08972	1196 aa	Known RBP	4.19	□□□□□ -1.74
NUG1	YER006W	KEL3	Q08979	651 aa	Predicted RBP	4.19	□□□□□ -1.74
NUG1	YER006W	AEP3	Q12089	606 aa		4.19	□□□□□ -1.74
NUG1	YER006W	YDL109C	Q12103	647 aa		4.19	□□□□□ -1.74
NUG1	YER006W	BAG7	Q12128	409 aa		4.19	□□□□□ -1.74
NUG1	YER006W	TAH18	Q12181	623 aa		4.19	□□□□□ -1.74
NUG1	YER006W	AHC1	Q12433	566 aa		4.19	□□□□□ -1.74
NUG1	YER006W	YCL001W-B	Q96VH2	84 aa		4.19	□□□□□ -1.74
NUG1	YER006W	CDC8	P00572	216 aa		4.18	□□□□□ -1.74
NUG1	YER006W	CBP6	P07253	162 aa	Predicted RBP	4.18	□□□□□ -1.74
NUG1	YER006W	RPS4A	P0CX35	261 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	RPS4B	P0CX36	261 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	KIN2	P13186	1147 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	YPK2	P18961	677 aa		4.18	□□□□□ -1.74
NUG1	YER006W	LCB1	P25045	558 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	SEC1	P30619	724 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	SSH4	P32343	579 aa		4.18	□□□□□ -1.74
NUG1	YER006W	PAH1	P32567	862 aa		4.18	□□□□□ -1.74
NUG1	YER006W	TFB1	P32776	642 aa		4.18	□□□□□ -1.74
NUG1	YER006W	PXL1	P36166	706 aa		4.18	□□□□□ -1.74
NUG1	YER006W	NAT2	P37293	288 aa		4.18	□□□□□ -1.74
NUG1	YER006W	KTR4	P38131	464 aa		4.18	□□□□□ -1.74
NUG1	YER006W	APM3	P38153	483 aa		4.18	□□□□□ -1.74
NUG1	YER006W	CCZ1	P38273	704 aa		4.18	□□□□□ -1.74
NUG1	YER006W	MSG5	P38590	489 aa		4.18	□□□□□ -1.74
NUG1	YER006W	RRP3	P38712	501 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	SAW1	P39735	261 aa		4.18	□□□□□ -1.74
NUG1	YER006W	RSP5	P39940	809 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	SPF1	P39986	1215 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	ARF3	P40994	183 aa	RIP-Chip data	4.18	□□□□□ -1.74	not detected
NUG1	YER006W	RMR1	P53060	241 aa		4.18	□□□□□ -1.74
NUG1	YER006W	YGL117W	P53133	265 aa		4.18	□□□□□ -1.74
NUG1	YER006W	YGR054W	P53235	642 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	YGR117C	P53270	476 aa		4.18	□□□□□ -1.74
NUG1	YER006W	COS6	P53344	381 aa		4.18	□□□□□ -1.74
NUG1	YER006W	FOL1	P53848	824 aa		4.18	□□□□□ -1.74
NUG1	YER006W	ATP25	Q03153	612 aa		4.18	□□□□□ -1.74
NUG1	YER006W	HER2	Q03557	464 aa		4.18	□□□□□ -1.74
NUG1	YER006W	YMR010W	Q03687	405 aa		4.18	□□□□□ -1.74
NUG1	YER006W	SNX41	Q04053	625 aa		4.18	□□□□□ -1.74
NUG1	YER006W	UTP14	Q04500	899 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	RTN1	Q04947	295 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	GMC2	Q06201	188 aa		4.18	□□□□□ -1.74
NUG1	YER006W	YDL114W	Q07530	308 aa		4.18	□□□□□ -1.74
NUG1	YER006W	GPI13	Q07830	1017 aa		4.18	□□□□□ -1.74
NUG1	YER006W	YLR001C	Q07895	862 aa		4.18	□□□□□ -1.74
NUG1	YER006W	YOR378W	Q08902	515 aa		4.18	□□□□□ -1.74
NUG1	YER006W	CTI6	Q08923	506 aa		4.18	□□□□□ -1.74
NUG1	YER006W	RPN5	Q12250	445 aa	Known RBP	4.18	□□□□□ -1.74
NUG1	YER006W	DFG16	Q99234	619 aa		4.18	□□□□□ -1.74
NUG1	YER006W	MPD2	Q99316	277 aa		4.18	□□□□□ -1.74
NUG1	YER006W	SEM1	O94742	89 aa		4.17	□□□□□ -1.74
NUG1	YER006W	ATP6	P00854	259 aa		4.17	□□□□□ -1.74
NUG1	YER006W	HXK1	P04806	485 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	CHO2	P05374	869 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	RPS24A	P0CX31	135 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	RPS24B	P0CX32	135 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	MATALPHA2	P0CY08	210 aa		4.17	□□□□□ -1.74
NUG1	YER006W	HMLALPHA2	P0CY09	210 aa		4.17	□□□□□ -1.74
NUG1	YER006W	GPA2	P10823	449 aa		4.17	□□□□□ -1.74
NUG1	YER006W	STE12	P13574	688 aa		4.17	□□□□□ -1.74
NUG1	YER006W	SNA3	P14359	133 aa		4.17	□□□□□ -1.74
NUG1	YER006W	ATP12	P22135	325 aa		4.17	□□□□□ -1.74
NUG1	YER006W	URE2	P23202	354 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	PTP1	P25044	335 aa		4.17	□□□□□ -1.74
NUG1	YER006W	RPS5	P26783	225 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	CDC15	P27636	974 aa		4.17	□□□□□ -1.74
NUG1	YER006W	VMA6	P32366	345 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	DPH2	P32461	534 aa		4.17	□□□□□ -1.74
NUG1	YER006W	TPO5	P36029	618 aa		4.17	□□□□□ -1.74
NUG1	YER006W	BCD1	P38772	366 aa		4.17	□□□□□ -1.74
NUG1	YER006W	SSP120	P39931	234 aa	Known RBP	4.17	□□□□□ -1.74
NUG1	YER006W	YMR134W	P40207	237 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms